RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-238ENST00000592412 NISCHQ9Y2I1 1504 aa46.5■■■■■ 5.03
CIRBP-238ENST00000592412 ABCC9O60706 1549 aa42.05■■■■■ 4.32
CIRBP-238ENST00000592412 CCDC180Q9P1Z9 1646 aa41.8■■■■■ 4.28
CIRBP-238ENST00000592412 RB1CC1Q8TDY2 1594 aa39.88■■■■□ 3.97
CIRBP-238ENST00000592412 DNAJC5BQ9UF47 199 aa39.72■■■■□ 3.95
CIRBP-238ENST00000592412 NACADO15069 1562 aa39.56■■■■□ 3.92
CIRBP-238ENST00000592412 DCAF8L2P0C7V8 631 aa39.21■■■■□ 3.87
CIRBP-238ENST00000592412 PABPN1Q86U42 306 aaKnown RBP eCLIP39.1■■■■□ 3.85
CIRBP-238ENST00000592412 UNC13AQ9UPW8 1703 aa39.06■■■■□ 3.84
CIRBP-238ENST00000592412 MYO15BQ96JP2 1530 aa38.97■■■■□ 3.83
CIRBP-238ENST00000592412 BICRAQ9NZM4 1560 aa38.84■■■■□ 3.81
CIRBP-238ENST00000592412 ZCCHC6Q5VYS8 1495 aaKnown RBP38.51■■■■□ 3.76
CIRBP-238ENST00000592412 DCAF1Q9Y4B6 1507 aa38.39■■■■□ 3.74
CIRBP-238ENST00000592412 SHROOM4Q9ULL8 1493 aa38.2■■■■□ 3.71
CIRBP-238ENST00000592412 SCRIBQ14160 1630 aa38.09■■■■□ 3.69
CIRBP-238ENST00000592412 CC2D2AQ9P2K1 1620 aa37.98■■■■□ 3.67
CIRBP-238ENST00000592412 CECR2Q9BXF3 1484 aa37.89■■■■□ 3.66
CIRBP-238ENST00000592412 EIF4G1Q04637 1599 aaKnown RBP37.85■■■■□ 3.65
CIRBP-238ENST00000592412 NCAPD3P42695 1498 aa36.56■■■■□ 3.44
CIRBP-238ENST00000592412 DNAJC5Q9H3Z4 198 aa36.55■■■■□ 3.44
CIRBP-238ENST00000592412 ATAD2BQ9ULI0 1458 aa36.43■■■■□ 3.42
CIRBP-238ENST00000592412 SMARCA4P51532 1647 aa36.33■■■■□ 3.41
CIRBP-238ENST00000592412 CUX2O14529 1486 aa36.31■■■■□ 3.4
CIRBP-238ENST00000592412 HMGXB3Q12766 1538 aa36.27■■■■□ 3.4
CIRBP-238ENST00000592412 SMARCA2P51531 1590 aa36.26■■■■□ 3.39
CIRBP-238ENST00000592412 ERCC6Q03468 1493 aa36.24■■■■□ 3.39
CIRBP-238ENST00000592412 NESP48681 1621 aa36.09■■■■□ 3.37
CIRBP-238ENST00000592412 BAZ1AQ9NRL2 1556 aaPredicted RBP36.07■■■■□ 3.37
CIRBP-238ENST00000592412 BAZ1BQ9UIG0 1483 aaKnown RBP36.01■■■■□ 3.36
CIRBP-238ENST00000592412 PEG3Q9GZU2 1588 aa36■■■■□ 3.35
CIRBP-238ENST00000592412 MROH2BQ7Z745 1585 aa35.85■■■■□ 3.33
CIRBP-238ENST00000592412 THOC2Q8NI27 1593 aaKnown RBP35.78■■■■□ 3.32
CIRBP-238ENST00000592412 LAMC3Q9Y6N6 1575 aa35.74■■■■□ 3.31
CIRBP-238ENST00000592412 KIF21AQ7Z4S6 1674 aa35.6■■■■□ 3.29
CIRBP-238ENST00000592412 PDS5BQ9NTI5 1447 aa35.5■■■■□ 3.27
CIRBP-238ENST00000592412 CADPSQ9ULU8 1353 aa35.41■■■■□ 3.26
CIRBP-238ENST00000592412 WIZO95785 1651 aa35.4■■■■□ 3.26
CIRBP-238ENST00000592412 MRC2Q9UBG0 1479 aa35.26■■■■□ 3.23
CIRBP-238ENST00000592412 WDR62O43379 1518 aa35.22■■■■□ 3.23
CIRBP-238ENST00000592412 CEP164Q9UPV0 1460 aa35.05■■■■□ 3.2
CIRBP-238ENST00000592412 FANCD2Q9BXW9 1451 aa35.02■■■■□ 3.2
CIRBP-238ENST00000592412 RSF1Q96T23 1441 aaPredicted RBP35.01■■■■□ 3.2
CIRBP-238ENST00000592412 CFTRP13569 1480 aa34.99■■■■□ 3.19
CIRBP-238ENST00000592412 TOP2AP11388 1531 aaKnown RBP34.91■■■■□ 3.18
CIRBP-238ENST00000592412 TRIM41Q8WV44 630 aa34.81■■■■□ 3.16
CIRBP-238ENST00000592412 URB2Q14146 1524 aaKnown RBP34.79■■■■□ 3.16
CIRBP-238ENST00000592412 PRDM2Q13029 1718 aa34.58■■■■□ 3.13
CIRBP-238ENST00000592412 OSCARQ8IYS5 282 aa34.55■■■■□ 3.12
CIRBP-238ENST00000592412 CCDC88BA6NC98 1476 aa34.53■■■■□ 3.12
CIRBP-238ENST00000592412 ZNF608Q9ULD9 1512 aaPredicted RBP34.4■■■■□ 3.1
CIRBP-238ENST00000592412 IFT140Q96RY7 1462 aa34.37■■■■□ 3.09
CIRBP-238ENST00000592412 TOPBP1Q92547 1522 aa34.35■■■■□ 3.09
CIRBP-238ENST00000592412 RIMBP3CA6NJZ7 1639 aa34.22■■■■□ 3.07
CIRBP-238ENST00000592412 RIMBP3BA6NNM3 1639 aa34.22■■■■□ 3.07
CIRBP-238ENST00000592412 RIMBP3Q9UFD9 1639 aa34.22■■■■□ 3.07
CIRBP-238ENST00000592412 DNMBPQ6XZF7 1577 aa34.19■■■■□ 3.06
CIRBP-238ENST00000592412 EIF4G3O43432 1585 aaKnown RBP34.18■■■■□ 3.06
CIRBP-238ENST00000592412 ABCC8Q09428 1581 aa34.17■■■■□ 3.06
CIRBP-238ENST00000592412 TARBP1Q13395 1621 aaKnown RBP34.09■■■■□ 3.05
CIRBP-238ENST00000592412 ARHGEF11O15085 1522 aa34.09■■■■□ 3.05
CIRBP-238ENST00000592412 AQRO60306 1485 aaKnown RBP eCLIP34.03■■■■□ 3.041e-9■■■■■ 30.9
CIRBP-238ENST00000592412 POLA1P09884 1462 aaPredicted RBP33.99■■■■□ 3.03
CIRBP-238ENST00000592412 CHD1O14646 1710 aa33.96■■■■□ 3.03
CIRBP-238ENST00000592412 RAD54L2Q9Y4B4 1467 aa33.88■■■■□ 3.01
CIRBP-238ENST00000592412 CYB5RLQ6IPT4 315 aa33.78■■■■□ 3
CIRBP-238ENST00000592412 SOGA1O94964 1423 aa33.78■■■■□ 3
CIRBP-238ENST00000592412 TDRD9Q8NDG6 1382 aaKnown RBP33.77■■■■□ 3
CIRBP-238ENST00000592412 ARAP1Q96P48 1450 aa33.76■■■■□ 3
CIRBP-238ENST00000592412 FBLN2P98095 1184 aa33.75■■■□□ 2.99
CIRBP-238ENST00000592412 FGD5Q6ZNL6 1462 aa33.73■■■□□ 2.99
CIRBP-238ENST00000592412 CUX1P39880 1505 aa33.69■■■□□ 2.98
CIRBP-238ENST00000592412 SNAPC4Q5SXM2 1469 aa33.67■■■□□ 2.98
CIRBP-238ENST00000592412 WDR97A6NE52 1622 aa33.66■■■□□ 2.98
CIRBP-238ENST00000592412 CLASP1Q7Z460 1538 aa33.6■■■□□ 2.97
CIRBP-238ENST00000592412 MAGI1Q96QZ7 1491 aaPredicted RBP33.54■■■□□ 2.96
CIRBP-238ENST00000592412 GRIN2BQ13224 1484 aa33.52■■■□□ 2.96
CIRBP-238ENST00000592412 SYNJ1O43426 1573 aa33.47■■■□□ 2.95
CIRBP-238ENST00000592412 CHMP7Q8WUX9 453 aaPredicted RBP33.47■■■□□ 2.95
CIRBP-238ENST00000592412 SYNJ2O15056 1496 aa33.44■■■□□ 2.94
CIRBP-238ENST00000592412 TRHP20396 242 aaPredicted RBP33.43■■■□□ 2.94
CIRBP-238ENST00000592412 PBRM1Q86U86 1689 aa33.39■■■□□ 2.94
CIRBP-238ENST00000592412 GAPVD1Q14C86 1478 aa33.37■■■□□ 2.93
CIRBP-238ENST00000592412 ABCA10Q8WWZ4 1543 aa33.33■■■□□ 2.93
CIRBP-238ENST00000592412 ABCA5Q8WWZ7 1642 aa33.33■■■□□ 2.93
CIRBP-238ENST00000592412 SUPT5HO00267 1087 aaKnown RBP33.19■■■□□ 2.9
CIRBP-238ENST00000592412 GRIN2AQ12879 1464 aa33.12■■■□□ 2.89
CIRBP-238ENST00000592412 WRNQ14191 1432 aaPredicted RBP eCLIP33.11■■■□□ 2.891e-6■■■■■ 58.5
CIRBP-238ENST00000592412 ADAMTS12P58397 1594 aa33.09■■■□□ 2.89
CIRBP-238ENST00000592412 ERCC6L2Q5T890 1561 aa33.09■■■□□ 2.89
CIRBP-238ENST00000592412 BIVM-ERCC5R4GMW8 1640 aa33.08■■■□□ 2.89
CIRBP-238ENST00000592412 TOP2BQ02880 1626 aa33.06■■■□□ 2.88
CIRBP-238ENST00000592412 CEP170Q5SW79 1584 aa33.04■■■□□ 2.88
CIRBP-238ENST00000592412 NUP160Q12769 1436 aa33.03■■■□□ 2.88
CIRBP-238ENST00000592412 FHAD1B1AJZ9 1412 aa32.94■■■□□ 2.86
CIRBP-238ENST00000592412 SHROOM2Q13796 1616 aa32.92■■■□□ 2.86
CIRBP-238ENST00000592412 ERICH3Q5RHP9 1530 aa32.89■■■□□ 2.86
CIRBP-238ENST00000592412 PRG4Q92954 1404 aaPredicted RBP32.69■■■□□ 2.82
CIRBP-238ENST00000592412 RUSC2Q8N2Y8 1516 aa32.64■■■□□ 2.82
CIRBP-238ENST00000592412 JPH4Q96JJ6 628 aa32.62■■■□□ 2.81
CIRBP-238ENST00000592412 KIF13AQ9H1H9 1805 aa32.59■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms