RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 NISCHQ9Y2I1 1504 aa44.55■■■■■ 4.72
CIRBP-243ENST00000593128 CCDC180Q9P1Z9 1646 aa39.92■■■■□ 3.98
CIRBP-243ENST00000593128 ABCC9O60706 1549 aa39.88■■■■□ 3.97
CIRBP-243ENST00000593128 RB1CC1Q8TDY2 1594 aa37.96■■■■□ 3.67
CIRBP-243ENST00000593128 DCAF8L2P0C7V8 631 aa37.77■■■■□ 3.64
CIRBP-243ENST00000593128 NACADO15069 1562 aa37.68■■■■□ 3.62
CIRBP-243ENST00000593128 DNAJC5BQ9UF47 199 aa37.19■■■■□ 3.54
CIRBP-243ENST00000593128 PABPN1Q86U42 306 aaKnown RBP eCLIP37.18■■■■□ 3.54
CIRBP-243ENST00000593128 UNC13AQ9UPW8 1703 aa37.16■■■■□ 3.54
CIRBP-243ENST00000593128 MYO15BQ96JP2 1530 aa37.1■■■■□ 3.53
CIRBP-243ENST00000593128 ZCCHC6Q5VYS8 1495 aaKnown RBP36.94■■■■□ 3.5
CIRBP-243ENST00000593128 BICRAQ9NZM4 1560 aa36.8■■■■□ 3.48
CIRBP-243ENST00000593128 DCAF1Q9Y4B6 1507 aa36.71■■■■□ 3.47
CIRBP-243ENST00000593128 SCRIBQ14160 1630 aa36.52■■■■□ 3.44
CIRBP-243ENST00000593128 SHROOM4Q9ULL8 1493 aa36.23■■■■□ 3.39
CIRBP-243ENST00000593128 CC2D2AQ9P2K1 1620 aa36■■■■□ 3.35
CIRBP-243ENST00000593128 EIF4G1Q04637 1599 aaKnown RBP35.93■■■■□ 3.34
CIRBP-243ENST00000593128 CECR2Q9BXF3 1484 aa35.86■■■■□ 3.33
CIRBP-243ENST00000593128 SMARCA4P51532 1647 aa34.76■■■■□ 3.15
CIRBP-243ENST00000593128 NCAPD3P42695 1498 aa34.74■■■■□ 3.15
CIRBP-243ENST00000593128 ATAD2BQ9ULI0 1458 aa34.71■■■■□ 3.15
CIRBP-243ENST00000593128 SMARCA2P51531 1590 aa34.64■■■■□ 3.14
CIRBP-243ENST00000593128 BAZ1AQ9NRL2 1556 aaPredicted RBP34.59■■■■□ 3.13
CIRBP-243ENST00000593128 HMGXB3Q12766 1538 aa34.53■■■■□ 3.12
CIRBP-243ENST00000593128 BAZ1BQ9UIG0 1483 aaKnown RBP34.46■■■■□ 3.11
CIRBP-243ENST00000593128 ERCC6Q03468 1493 aa34.45■■■■□ 3.1
CIRBP-243ENST00000593128 MROH2BQ7Z745 1585 aa34.37■■■■□ 3.09
CIRBP-243ENST00000593128 PEG3Q9GZU2 1588 aa34.32■■■■□ 3.08
CIRBP-243ENST00000593128 NESP48681 1621 aa34.29■■■■□ 3.08
CIRBP-243ENST00000593128 CUX2O14529 1486 aa34.2■■■■□ 3.07
CIRBP-243ENST00000593128 WIZO95785 1651 aa34.03■■■■□ 3.04
CIRBP-243ENST00000593128 DNAJC5Q9H3Z4 198 aa34.01■■■■□ 3.03
CIRBP-243ENST00000593128 LAMC3Q9Y6N6 1575 aa34■■■■□ 3.03
CIRBP-243ENST00000593128 KIF21AQ7Z4S6 1674 aa33.88■■■■□ 3.01
CIRBP-243ENST00000593128 THOC2Q8NI27 1593 aaKnown RBP33.86■■■■□ 3.01
CIRBP-243ENST00000593128 PDS5BQ9NTI5 1447 aa33.81■■■■□ 3
CIRBP-243ENST00000593128 CADPSQ9ULU8 1353 aa33.74■■■□□ 2.99
CIRBP-243ENST00000593128 RSF1Q96T23 1441 aaPredicted RBP33.68■■■□□ 2.98
CIRBP-243ENST00000593128 TOP2AP11388 1531 aaKnown RBP33.53■■■□□ 2.96
CIRBP-243ENST00000593128 MRC2Q9UBG0 1479 aa33.53■■■□□ 2.96
CIRBP-243ENST00000593128 CEP164Q9UPV0 1460 aa33.45■■■□□ 2.95
CIRBP-243ENST00000593128 FANCD2Q9BXW9 1451 aa33.41■■■□□ 2.94
CIRBP-243ENST00000593128 WDR62O43379 1518 aa33.4■■■□□ 2.94
CIRBP-243ENST00000593128 CFTRP13569 1480 aa33.37■■■□□ 2.93
CIRBP-243ENST00000593128 CCDC88BA6NC98 1476 aa33.16■■■□□ 2.9
CIRBP-243ENST00000593128 PRDM2Q13029 1718 aa33.15■■■□□ 2.9
CIRBP-243ENST00000593128 URB2Q14146 1524 aaKnown RBP33.12■■■□□ 2.89
CIRBP-243ENST00000593128 TRIM41Q8WV44 630 aa32.79■■■□□ 2.84
CIRBP-243ENST00000593128 TOPBP1Q92547 1522 aa32.78■■■□□ 2.84
CIRBP-243ENST00000593128 IFT140Q96RY7 1462 aa32.74■■■□□ 2.83
CIRBP-243ENST00000593128 OSCARQ8IYS5 282 aa32.72■■■□□ 2.83
CIRBP-243ENST00000593128 ZNF608Q9ULD9 1512 aaPredicted RBP32.71■■■□□ 2.83
CIRBP-243ENST00000593128 ABCC8Q09428 1581 aa32.68■■■□□ 2.82
CIRBP-243ENST00000593128 DNMBPQ6XZF7 1577 aa32.68■■■□□ 2.82
CIRBP-243ENST00000593128 EIF4G3O43432 1585 aaKnown RBP32.56■■■□□ 2.8
CIRBP-243ENST00000593128 SUPT5HO00267 1087 aaKnown RBP32.49■■■□□ 2.79
CIRBP-243ENST00000593128 TARBP1Q13395 1621 aaKnown RBP32.47■■■□□ 2.79
CIRBP-243ENST00000593128 POLA1P09884 1462 aaPredicted RBP32.45■■■□□ 2.79
CIRBP-243ENST00000593128 AQRO60306 1485 aaKnown RBP eCLIP32.44■■■□□ 2.783e-10■■■■■ 35.8
CIRBP-243ENST00000593128 RAD54L2Q9Y4B4 1467 aa32.38■■■□□ 2.77
CIRBP-243ENST00000593128 SOGA1O94964 1423 aa32.34■■■□□ 2.77
CIRBP-243ENST00000593128 CHD1O14646 1710 aa32.33■■■□□ 2.77
CIRBP-243ENST00000593128 RIMBP3CA6NJZ7 1639 aa32.32■■■□□ 2.76
CIRBP-243ENST00000593128 RIMBP3BA6NNM3 1639 aa32.32■■■□□ 2.76
CIRBP-243ENST00000593128 RIMBP3Q9UFD9 1639 aa32.32■■■□□ 2.76
CIRBP-243ENST00000593128 FGD5Q6ZNL6 1462 aa32.31■■■□□ 2.76
CIRBP-243ENST00000593128 FBLN2P98095 1184 aa32.31■■■□□ 2.76
CIRBP-243ENST00000593128 CUX1P39880 1505 aa32.29■■■□□ 2.76
CIRBP-243ENST00000593128 TDRD9Q8NDG6 1382 aaKnown RBP32.28■■■□□ 2.76
CIRBP-243ENST00000593128 ARHGEF11O15085 1522 aa32.19■■■□□ 2.74
CIRBP-243ENST00000593128 SNAPC4Q5SXM2 1469 aa32.13■■■□□ 2.73
CIRBP-243ENST00000593128 WDR97A6NE52 1622 aa32.1■■■□□ 2.73
CIRBP-243ENST00000593128 CHMP7Q8WUX9 453 aaPredicted RBP32.02■■■□□ 2.72
CIRBP-243ENST00000593128 GRIN2BQ13224 1484 aa32.02■■■□□ 2.72
CIRBP-243ENST00000593128 CYB5RLQ6IPT4 315 aa32.01■■■□□ 2.71
CIRBP-243ENST00000593128 PBRM1Q86U86 1689 aa31.99■■■□□ 2.71
CIRBP-243ENST00000593128 MAGI1Q96QZ7 1491 aaPredicted RBP31.98■■■□□ 2.71
CIRBP-243ENST00000593128 GAPVD1Q14C86 1478 aa31.94■■■□□ 2.7
CIRBP-243ENST00000593128 SYNJ1O43426 1573 aa31.9■■■□□ 2.7
CIRBP-243ENST00000593128 SYNJ2O15056 1496 aa31.89■■■□□ 2.7
CIRBP-243ENST00000593128 ARAP1Q96P48 1450 aa31.88■■■□□ 2.69
CIRBP-243ENST00000593128 ABCA10Q8WWZ4 1543 aa31.88■■■□□ 2.69
CIRBP-243ENST00000593128 ABCA5Q8WWZ7 1642 aa31.86■■■□□ 2.69
CIRBP-243ENST00000593128 CLASP1Q7Z460 1538 aa31.85■■■□□ 2.69
CIRBP-243ENST00000593128 WRNQ14191 1432 aaPredicted RBP eCLIP31.83■■■□□ 2.691e-6■■■■■ 58.5
CIRBP-243ENST00000593128 BIVM-ERCC5R4GMW8 1640 aa31.81■■■□□ 2.68
CIRBP-243ENST00000593128 TOP2BQ02880 1626 aa31.79■■■□□ 2.68
CIRBP-243ENST00000593128 TRHP20396 242 aaPredicted RBP31.68■■■□□ 2.66
CIRBP-243ENST00000593128 ADAMTS12P58397 1594 aa31.63■■■□□ 2.65
CIRBP-243ENST00000593128 GRIN2AQ12879 1464 aa31.61■■■□□ 2.65
CIRBP-243ENST00000593128 CEP170Q5SW79 1584 aa31.51■■■□□ 2.64
CIRBP-243ENST00000593128 FHAD1B1AJZ9 1412 aa31.51■■■□□ 2.64
CIRBP-243ENST00000593128 ERICH3Q5RHP9 1530 aa31.49■■■□□ 2.63
CIRBP-243ENST00000593128 ERCC6L2Q5T890 1561 aa31.44■■■□□ 2.62
CIRBP-243ENST00000593128 NUP160Q12769 1436 aa31.44■■■□□ 2.62
CIRBP-243ENST00000593128 SHROOM2Q13796 1616 aa31.31■■■□□ 2.6
CIRBP-243ENST00000593128 PRG4Q92954 1404 aaPredicted RBP31.21■■■□□ 2.59
CIRBP-243ENST00000593128 KIF27Q86VH2 1401 aa31.2■■■□□ 2.59
CIRBP-243ENST00000593128 RUSC2Q8N2Y8 1516 aa31.19■■■□□ 2.58
CIRBP-243ENST00000593128 JPH4Q96JJ6 628 aa31.18■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms