RNA–Protein interactions for RNA: ENST00000587323.5

CIRBP-213, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,092 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-213ENST00000587323 NISCHQ9Y2I1 1504 aa47.8■■■■■ 5.24
CIRBP-213ENST00000587323 CCDC180Q9P1Z9 1646 aa42.47■■■■■ 4.39
CIRBP-213ENST00000587323 ABCC9O60706 1549 aa41.54■■■■■ 4.24
CIRBP-213ENST00000587323 DCAF8L2P0C7V8 631 aa40.21■■■■■ 4.03
CIRBP-213ENST00000587323 RB1CC1Q8TDY2 1594 aa40.01■■■■■ 4
CIRBP-213ENST00000587323 NACADO15069 1562 aa39.96■■■■□ 3.99
CIRBP-213ENST00000587323 ZCCHC6Q5VYS8 1495 aaKnown RBP39.77■■■■□ 3.96
CIRBP-213ENST00000587323 MYO15BQ96JP2 1530 aa39.65■■■■□ 3.94
CIRBP-213ENST00000587323 DCAF1Q9Y4B6 1507 aa39.51■■■■□ 3.92
CIRBP-213ENST00000587323 DNAJC5BQ9UF47 199 aa39.04■■■■□ 3.84
CIRBP-213ENST00000587323 UNC13AQ9UPW8 1703 aa39.02■■■■□ 3.84
CIRBP-213ENST00000587323 PABPN1Q86U42 306 aaKnown RBP eCLIP38.88■■■■□ 3.81
CIRBP-213ENST00000587323 SCRIBQ14160 1630 aa38.78■■■■□ 3.8
CIRBP-213ENST00000587323 BICRAQ9NZM4 1560 aa38.65■■■■□ 3.78
CIRBP-213ENST00000587323 SHROOM4Q9ULL8 1493 aa38.32■■■■□ 3.72
CIRBP-213ENST00000587323 EIF4G1Q04637 1599 aaKnown RBP37.7■■■■□ 3.63
CIRBP-213ENST00000587323 CC2D2AQ9P2K1 1620 aa37.56■■■■□ 3.6
CIRBP-213ENST00000587323 CECR2Q9BXF3 1484 aa37.39■■■■□ 3.58
CIRBP-213ENST00000587323 BAZ1AQ9NRL2 1556 aaPredicted RBP37.08■■■■□ 3.53
CIRBP-213ENST00000587323 SMARCA4P51532 1647 aa37.07■■■■□ 3.53
CIRBP-213ENST00000587323 SMARCA2P51531 1590 aa36.87■■■■□ 3.49
CIRBP-213ENST00000587323 ATAD2BQ9ULI0 1458 aa36.86■■■■□ 3.49
CIRBP-213ENST00000587323 NCAPD3P42695 1498 aa36.83■■■■□ 3.49
CIRBP-213ENST00000587323 MROH2BQ7Z745 1585 aa36.81■■■■□ 3.48
CIRBP-213ENST00000587323 PEG3Q9GZU2 1588 aa36.66■■■■□ 3.46
CIRBP-213ENST00000587323 HMGXB3Q12766 1538 aa36.64■■■■□ 3.46
CIRBP-213ENST00000587323 BAZ1BQ9UIG0 1483 aaKnown RBP36.62■■■■□ 3.45
CIRBP-213ENST00000587323 WIZO95785 1651 aa36.47■■■■□ 3.43
CIRBP-213ENST00000587323 RSF1Q96T23 1441 aaPredicted RBP36.43■■■■□ 3.42
CIRBP-213ENST00000587323 TOP2AP11388 1531 aaKnown RBP36.06■■■■□ 3.36
CIRBP-213ENST00000587323 DNAJC5Q9H3Z4 198 aa36■■■■□ 3.35
CIRBP-213ENST00000587323 NESP48681 1621 aa35.91■■■■□ 3.34
CIRBP-213ENST00000587323 ERCC6Q03468 1493 aa35.9■■■■□ 3.34
CIRBP-213ENST00000587323 LAMC3Q9Y6N6 1575 aa35.89■■■■□ 3.34
CIRBP-213ENST00000587323 CUX2O14529 1486 aa35.86■■■■□ 3.33
CIRBP-213ENST00000587323 CADPSQ9ULU8 1353 aa35.81■■■■□ 3.32
CIRBP-213ENST00000587323 SUPT5HO00267 1087 aaKnown RBP35.77■■■■□ 3.32
CIRBP-213ENST00000587323 PDS5BQ9NTI5 1447 aa35.72■■■■□ 3.31
CIRBP-213ENST00000587323 CCDC88BA6NC98 1476 aa35.67■■■■□ 3.3
CIRBP-213ENST00000587323 CFTRP13569 1480 aa35.55■■■■□ 3.28
CIRBP-213ENST00000587323 KIF21AQ7Z4S6 1674 aa35.52■■■■□ 3.28
CIRBP-213ENST00000587323 FANCD2Q9BXW9 1451 aa35.39■■■■□ 3.26
CIRBP-213ENST00000587323 CEP164Q9UPV0 1460 aa35.36■■■■□ 3.25
CIRBP-213ENST00000587323 PRDM2Q13029 1718 aa35.34■■■■□ 3.25
CIRBP-213ENST00000587323 THOC2Q8NI27 1593 aaKnown RBP35.31■■■■□ 3.24
CIRBP-213ENST00000587323 MRC2Q9UBG0 1479 aa35.27■■■■□ 3.24
CIRBP-213ENST00000587323 WDR62O43379 1518 aa35.1■■■■□ 3.21
CIRBP-213ENST00000587323 URB2Q14146 1524 aaKnown RBP34.96■■■■□ 3.19
CIRBP-213ENST00000587323 ABCC8Q09428 1581 aa34.91■■■■□ 3.18
CIRBP-213ENST00000587323 TOPBP1Q92547 1522 aa34.81■■■■□ 3.16
CIRBP-213ENST00000587323 DNMBPQ6XZF7 1577 aa34.78■■■■□ 3.16
CIRBP-213ENST00000587323 IFT140Q96RY7 1462 aa34.61■■■■□ 3.13
CIRBP-213ENST00000587323 CUX1P39880 1505 aa34.53■■■■□ 3.12
CIRBP-213ENST00000587323 POLA1P09884 1462 aaPredicted RBP34.5■■■■□ 3.11
CIRBP-213ENST00000587323 SOGA1O94964 1423 aa34.47■■■■□ 3.11
CIRBP-213ENST00000587323 FGD5Q6ZNL6 1462 aa34.46■■■■□ 3.11
CIRBP-213ENST00000587323 WRNQ14191 1432 aaPredicted RBP eCLIP34.42■■■■□ 3.11e-6■■■■■ 58.5
CIRBP-213ENST00000587323 ZNF608Q9ULD9 1512 aaPredicted RBP34.38■■■■□ 3.09
CIRBP-213ENST00000587323 RAD54L2Q9Y4B4 1467 aa34.38■■■■□ 3.09
CIRBP-213ENST00000587323 TARBP1Q13395 1621 aaKnown RBP34.37■■■■□ 3.09
CIRBP-213ENST00000587323 TOP2BQ02880 1626 aa34.29■■■■□ 3.08
CIRBP-213ENST00000587323 BIVM-ERCC5R4GMW8 1640 aa34.27■■■■□ 3.08
CIRBP-213ENST00000587323 TRIM41Q8WV44 630 aa34.27■■■■□ 3.08
CIRBP-213ENST00000587323 EIF4G3O43432 1585 aaKnown RBP34.26■■■■□ 3.07
CIRBP-213ENST00000587323 AQRO60306 1485 aaKnown RBP eCLIP34.26■■■■□ 3.073e-10■■■■■ 35.8
CIRBP-213ENST00000587323 SYNJ1O43426 1573 aa34.24■■■■□ 3.07
CIRBP-213ENST00000587323 TDRD9Q8NDG6 1382 aaKnown RBP34.23■■■■□ 3.07
CIRBP-213ENST00000587323 OSCARQ8IYS5 282 aa34.21■■■■□ 3.07
CIRBP-213ENST00000587323 WDR97A6NE52 1622 aa34.17■■■■□ 3.06
CIRBP-213ENST00000587323 ABCA10Q8WWZ4 1543 aa34.1■■■■□ 3.05
CIRBP-213ENST00000587323 GAPVD1Q14C86 1478 aa34.03■■■■□ 3.04
CIRBP-213ENST00000587323 FBLN2P98095 1184 aa34.02■■■■□ 3.04
CIRBP-213ENST00000587323 GRIN2BQ13224 1484 aa34.01■■■■□ 3.04
CIRBP-213ENST00000587323 PBRM1Q86U86 1689 aa33.93■■■■□ 3.02
CIRBP-213ENST00000587323 SNAPC4Q5SXM2 1469 aa33.93■■■■□ 3.02
CIRBP-213ENST00000587323 ABCA5Q8WWZ7 1642 aa33.93■■■■□ 3.02
CIRBP-213ENST00000587323 MAGI1Q96QZ7 1491 aaPredicted RBP33.9■■■■□ 3.02
CIRBP-213ENST00000587323 CHMP7Q8WUX9 453 aaPredicted RBP33.9■■■■□ 3.02
CIRBP-213ENST00000587323 CHD1O14646 1710 aa33.86■■■■□ 3.01
CIRBP-213ENST00000587323 SYNJ2O15056 1496 aa33.77■■■■□ 3
CIRBP-213ENST00000587323 KIF27Q86VH2 1401 aa33.74■■■□□ 2.99
CIRBP-213ENST00000587323 ERICH3Q5RHP9 1530 aa33.73■■■□□ 2.99
CIRBP-213ENST00000587323 RIMBP3CA6NJZ7 1639 aa33.71■■■□□ 2.99
CIRBP-213ENST00000587323 RIMBP3BA6NNM3 1639 aa33.71■■■□□ 2.99
CIRBP-213ENST00000587323 RIMBP3Q9UFD9 1639 aa33.71■■■□□ 2.99
CIRBP-213ENST00000587323 FHAD1B1AJZ9 1412 aa33.64■■■□□ 2.98
CIRBP-213ENST00000587323 ADAMTS12P58397 1594 aa33.61■■■□□ 2.97
CIRBP-213ENST00000587323 ARHGEF11O15085 1522 aa33.61■■■□□ 2.97
CIRBP-213ENST00000587323 GRIN2AQ12879 1464 aa33.54■■■□□ 2.96
CIRBP-213ENST00000587323 IGF1RP08069 1367 aa33.52■■■□□ 2.96
CIRBP-213ENST00000587323 CUL7Q14999 1698 aa33.46■■■□□ 2.95
CIRBP-213ENST00000587323 CLASP1Q7Z460 1538 aa33.41■■■□□ 2.94
CIRBP-213ENST00000587323 CARMIL1Q5VZK9 1371 aa33.39■■■□□ 2.94
CIRBP-213ENST00000587323 CYB5RLQ6IPT4 315 aa33.38■■■□□ 2.93
CIRBP-213ENST00000587323 RUSC2Q8N2Y8 1516 aa33.35■■■□□ 2.93
CIRBP-213ENST00000587323 NUP160Q12769 1436 aa33.35■■■□□ 2.93
CIRBP-213ENST00000587323 CEP170Q5SW79 1584 aa33.33■■■□□ 2.93
CIRBP-213ENST00000587323 CHIC1Q5VXU3 224 aa33.32■■■□□ 2.92
CIRBP-213ENST00000587323 ARAP1Q96P48 1450 aa33.26■■■□□ 2.92
CIRBP-213ENST00000587323 RAPGEF2Q9Y4G8 1499 aa33.18■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms