RNA–Protein interactions for RNA: ENST00000320936.9

CIRBP-201, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIRBP, Length 1,328 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-201ENST00000320936 NISCHQ9Y2I1 1504 aa45.22■■■■■ 4.83
CIRBP-201ENST00000320936 CCDC180Q9P1Z9 1646 aa40.26■■■■■ 4.04
CIRBP-201ENST00000320936 ABCC9O60706 1549 aa39.32■■■■□ 3.89
CIRBP-201ENST00000320936 RB1CC1Q8TDY2 1594 aa37.86■■■■□ 3.65
CIRBP-201ENST00000320936 DCAF8L2P0C7V8 631 aa37.86■■■■□ 3.65
CIRBP-201ENST00000320936 NACADO15069 1562 aa37.78■■■■□ 3.64
CIRBP-201ENST00000320936 ZCCHC6Q5VYS8 1495 aaKnown RBP37.7■■■■□ 3.63
CIRBP-201ENST00000320936 MYO15BQ96JP2 1530 aa37.48■■■■□ 3.59
CIRBP-201ENST00000320936 DCAF1Q9Y4B6 1507 aa37.38■■■■□ 3.57
CIRBP-201ENST00000320936 UNC13AQ9UPW8 1703 aa37.06■■■■□ 3.52
CIRBP-201ENST00000320936 SCRIBQ14160 1630 aa36.8■■■■□ 3.48
CIRBP-201ENST00000320936 PABPN1Q86U42 306 aaKnown RBP eCLIP36.72■■■■□ 3.47
CIRBP-201ENST00000320936 BICRAQ9NZM4 1560 aa36.64■■■■□ 3.46
CIRBP-201ENST00000320936 SHROOM4Q9ULL8 1493 aa36.25■■■■□ 3.39
CIRBP-201ENST00000320936 DNAJC5BQ9UF47 199 aa35.89■■■■□ 3.34
CIRBP-201ENST00000320936 EIF4G1Q04637 1599 aaKnown RBP35.72■■■■□ 3.31
CIRBP-201ENST00000320936 CC2D2AQ9P2K1 1620 aa35.58■■■■□ 3.29
CIRBP-201ENST00000320936 CECR2Q9BXF3 1484 aa35.3■■■■□ 3.24
CIRBP-201ENST00000320936 SMARCA4P51532 1647 aa35.14■■■■□ 3.22
CIRBP-201ENST00000320936 BAZ1AQ9NRL2 1556 aaPredicted RBP35.09■■■■□ 3.21
CIRBP-201ENST00000320936 SMARCA2P51531 1590 aa34.88■■■■□ 3.17
CIRBP-201ENST00000320936 MROH2BQ7Z745 1585 aa34.87■■■■□ 3.17
CIRBP-201ENST00000320936 ATAD2BQ9ULI0 1458 aa34.86■■■■□ 3.17
CIRBP-201ENST00000320936 NCAPD3P42695 1498 aa34.79■■■■□ 3.16
CIRBP-201ENST00000320936 PEG3Q9GZU2 1588 aa34.71■■■■□ 3.15
CIRBP-201ENST00000320936 HMGXB3Q12766 1538 aa34.7■■■■□ 3.15
CIRBP-201ENST00000320936 BAZ1BQ9UIG0 1483 aaKnown RBP34.65■■■■□ 3.14
CIRBP-201ENST00000320936 WIZO95785 1651 aa34.56■■■■□ 3.12
CIRBP-201ENST00000320936 RSF1Q96T23 1441 aaPredicted RBP34.46■■■■□ 3.11
CIRBP-201ENST00000320936 TOP2AP11388 1531 aaKnown RBP34.17■■■■□ 3.06
CIRBP-201ENST00000320936 NESP48681 1621 aa34.03■■■■□ 3.04
CIRBP-201ENST00000320936 LAMC3Q9Y6N6 1575 aa33.96■■■■□ 3.03
CIRBP-201ENST00000320936 ERCC6Q03468 1493 aa33.94■■■■□ 3.02
CIRBP-201ENST00000320936 CADPSQ9ULU8 1353 aa33.8■■■■□ 3
CIRBP-201ENST00000320936 SUPT5HO00267 1087 aaKnown RBP33.74■■■□□ 2.99
CIRBP-201ENST00000320936 CCDC88BA6NC98 1476 aa33.72■■■□□ 2.99
CIRBP-201ENST00000320936 KIF21AQ7Z4S6 1674 aa33.72■■■□□ 2.99
CIRBP-201ENST00000320936 PDS5BQ9NTI5 1447 aa33.7■■■□□ 2.99
CIRBP-201ENST00000320936 CFTRP13569 1480 aa33.62■■■□□ 2.97
CIRBP-201ENST00000320936 PRDM2Q13029 1718 aa33.55■■■□□ 2.96
CIRBP-201ENST00000320936 THOC2Q8NI27 1593 aaKnown RBP33.52■■■□□ 2.96
CIRBP-201ENST00000320936 FANCD2Q9BXW9 1451 aa33.48■■■□□ 2.95
CIRBP-201ENST00000320936 CUX2O14529 1486 aa33.46■■■□□ 2.95
CIRBP-201ENST00000320936 CEP164Q9UPV0 1460 aa33.46■■■□□ 2.95
CIRBP-201ENST00000320936 MRC2Q9UBG0 1479 aa33.38■■■□□ 2.93
CIRBP-201ENST00000320936 WDR62O43379 1518 aa33.25■■■□□ 2.91
CIRBP-201ENST00000320936 URB2Q14146 1524 aaKnown RBP33.13■■■□□ 2.89
CIRBP-201ENST00000320936 TOPBP1Q92547 1522 aa32.94■■■□□ 2.86
CIRBP-201ENST00000320936 DNMBPQ6XZF7 1577 aa32.94■■■□□ 2.86
CIRBP-201ENST00000320936 ABCC8Q09428 1581 aa32.93■■■□□ 2.86
CIRBP-201ENST00000320936 CUX1P39880 1505 aa32.73■■■□□ 2.83
CIRBP-201ENST00000320936 IFT140Q96RY7 1462 aa32.71■■■□□ 2.83
CIRBP-201ENST00000320936 POLA1P09884 1462 aaPredicted RBP32.66■■■□□ 2.82
CIRBP-201ENST00000320936 FGD5Q6ZNL6 1462 aa32.62■■■□□ 2.81
CIRBP-201ENST00000320936 TARBP1Q13395 1621 aaKnown RBP32.59■■■□□ 2.81
CIRBP-201ENST00000320936 ZNF608Q9ULD9 1512 aaPredicted RBP32.57■■■□□ 2.8
CIRBP-201ENST00000320936 WRNQ14191 1432 aaPredicted RBP eCLIP32.54■■■□□ 2.81e-6■■■■■ 58.5
CIRBP-201ENST00000320936 RAD54L2Q9Y4B4 1467 aa32.53■■■□□ 2.8
CIRBP-201ENST00000320936 EIF4G3O43432 1585 aaKnown RBP32.52■■■□□ 2.8
CIRBP-201ENST00000320936 SOGA1O94964 1423 aa32.52■■■□□ 2.8
CIRBP-201ENST00000320936 SYNJ1O43426 1573 aa32.49■■■□□ 2.79
CIRBP-201ENST00000320936 BIVM-ERCC5R4GMW8 1640 aa32.49■■■□□ 2.79
CIRBP-201ENST00000320936 TOP2BQ02880 1626 aa32.48■■■□□ 2.79
CIRBP-201ENST00000320936 AQRO60306 1485 aaKnown RBP eCLIP32.39■■■□□ 2.783e-10■■■■■ 35.8
CIRBP-201ENST00000320936 WDR97A6NE52 1622 aa32.38■■■□□ 2.77
CIRBP-201ENST00000320936 TDRD9Q8NDG6 1382 aaKnown RBP32.34■■■□□ 2.77
CIRBP-201ENST00000320936 DNAJC5Q9H3Z4 198 aa32.28■■■□□ 2.76
CIRBP-201ENST00000320936 ABCA10Q8WWZ4 1543 aa32.26■■■□□ 2.76
CIRBP-201ENST00000320936 PBRM1Q86U86 1689 aa32.21■■■□□ 2.75
CIRBP-201ENST00000320936 ABCA5Q8WWZ7 1642 aa32.19■■■□□ 2.74
CIRBP-201ENST00000320936 GAPVD1Q14C86 1478 aa32.17■■■□□ 2.74
CIRBP-201ENST00000320936 GRIN2BQ13224 1484 aa32.16■■■□□ 2.74
CIRBP-201ENST00000320936 CHD1O14646 1710 aa32.13■■■□□ 2.73
CIRBP-201ENST00000320936 SNAPC4Q5SXM2 1469 aa32.13■■■□□ 2.73
CIRBP-201ENST00000320936 MAGI1Q96QZ7 1491 aaPredicted RBP32.07■■■□□ 2.72
CIRBP-201ENST00000320936 FBLN2P98095 1184 aa32.06■■■□□ 2.72
CIRBP-201ENST00000320936 OSCARQ8IYS5 282 aa32.06■■■□□ 2.72
CIRBP-201ENST00000320936 SYNJ2O15056 1496 aa31.93■■■□□ 2.7
CIRBP-201ENST00000320936 CHMP7Q8WUX9 453 aaPredicted RBP31.93■■■□□ 2.7
CIRBP-201ENST00000320936 ERICH3Q5RHP9 1530 aa31.91■■■□□ 2.7
CIRBP-201ENST00000320936 ADAMTS12P58397 1594 aa31.9■■■□□ 2.7
CIRBP-201ENST00000320936 KIF27Q86VH2 1401 aa31.86■■■□□ 2.69
CIRBP-201ENST00000320936 TRIM41Q8WV44 630 aa31.83■■■□□ 2.69
CIRBP-201ENST00000320936 FHAD1B1AJZ9 1412 aa31.78■■■□□ 2.68
CIRBP-201ENST00000320936 GRIN2AQ12879 1464 aa31.75■■■□□ 2.67
CIRBP-201ENST00000320936 CUL7Q14999 1698 aa31.69■■■□□ 2.66
CIRBP-201ENST00000320936 CLASP1Q7Z460 1538 aa31.68■■■□□ 2.66
CIRBP-201ENST00000320936 RIMBP3CA6NJZ7 1639 aa31.63■■■□□ 2.65
CIRBP-201ENST00000320936 RIMBP3BA6NNM3 1639 aa31.63■■■□□ 2.65
CIRBP-201ENST00000320936 RIMBP3Q9UFD9 1639 aa31.63■■■□□ 2.65
CIRBP-201ENST00000320936 IGF1RP08069 1367 aa31.63■■■□□ 2.65
CIRBP-201ENST00000320936 CEP170Q5SW79 1584 aa31.6■■■□□ 2.65
CIRBP-201ENST00000320936 ARHGEF11O15085 1522 aa31.6■■■□□ 2.65
CIRBP-201ENST00000320936 RUSC2Q8N2Y8 1516 aa31.56■■■□□ 2.64
CIRBP-201ENST00000320936 NUP160Q12769 1436 aa31.55■■■□□ 2.64
CIRBP-201ENST00000320936 CARMIL1Q5VZK9 1371 aa31.51■■■□□ 2.63
CIRBP-201ENST00000320936 CHIC1Q5VXU3 224 aa31.42■■■□□ 2.62
CIRBP-201ENST00000320936 SHROOM2Q13796 1616 aa31.36■■■□□ 2.61
CIRBP-201ENST00000320936 RAPGEF2Q9Y4G8 1499 aa31.35■■■□□ 2.61
CIRBP-201ENST00000320936 ARAP1Q96P48 1450 aa31.34■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms