RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 NISCHQ9Y2I1 1504 aa21.45■■□□□ 1.02
CIRBP-218ENST00000588344 CCDC180Q9P1Z9 1646 aa18.9■□□□□ 0.62
CIRBP-218ENST00000588344 ABCC9O60706 1549 aa18.35■□□□□ 0.53
CIRBP-218ENST00000588344 DCAF8L2P0C7V8 631 aa17.93■□□□□ 0.46
CIRBP-218ENST00000588344 ZCCHC6Q5VYS8 1495 aaKnown RBP17.88■□□□□ 0.45
CIRBP-218ENST00000588344 MYO15BQ96JP2 1530 aa17.83■□□□□ 0.45
CIRBP-218ENST00000588344 NACADO15069 1562 aa17.83■□□□□ 0.44
CIRBP-218ENST00000588344 DCAF1Q9Y4B6 1507 aa17.8■□□□□ 0.44
CIRBP-218ENST00000588344 RB1CC1Q8TDY2 1594 aa17.77■□□□□ 0.44
CIRBP-218ENST00000588344 PABPN1Q86U42 306 aaKnown RBP eCLIP17.24■□□□□ 0.35
CIRBP-218ENST00000588344 SCRIBQ14160 1630 aa17.23■□□□□ 0.35
CIRBP-218ENST00000588344 UNC13AQ9UPW8 1703 aa17.14■□□□□ 0.33
CIRBP-218ENST00000588344 BICRAQ9NZM4 1560 aa17.14■□□□□ 0.33
CIRBP-218ENST00000588344 SHROOM4Q9ULL8 1493 aa17.13■□□□□ 0.33
CIRBP-218ENST00000588344 EIF4G1Q04637 1599 aaKnown RBP16.72■□□□□ 0.27
CIRBP-218ENST00000588344 DNAJC5BQ9UF47 199 aa16.7■□□□□ 0.26
CIRBP-218ENST00000588344 CECR2Q9BXF3 1484 aa16.65■□□□□ 0.26
CIRBP-218ENST00000588344 BAZ1AQ9NRL2 1556 aaPredicted RBP16.62■□□□□ 0.25
CIRBP-218ENST00000588344 CC2D2AQ9P2K1 1620 aa16.57■□□□□ 0.24
CIRBP-218ENST00000588344 SMARCA4P51532 1647 aa16.53■□□□□ 0.24
CIRBP-218ENST00000588344 MROH2BQ7Z745 1585 aa16.49■□□□□ 0.23
CIRBP-218ENST00000588344 NCAPD3P42695 1498 aa16.48■□□□□ 0.23
CIRBP-218ENST00000588344 ATAD2BQ9ULI0 1458 aa16.48■□□□□ 0.23
CIRBP-218ENST00000588344 SMARCA2P51531 1590 aa16.47■□□□□ 0.23
CIRBP-218ENST00000588344 RSF1Q96T23 1441 aaPredicted RBP16.44■□□□□ 0.22
CIRBP-218ENST00000588344 PEG3Q9GZU2 1588 aa16.43■□□□□ 0.22
CIRBP-218ENST00000588344 BAZ1BQ9UIG0 1483 aaKnown RBP16.35■□□□□ 0.21
CIRBP-218ENST00000588344 HMGXB3Q12766 1538 aa16.35■□□□□ 0.21
CIRBP-218ENST00000588344 WIZO95785 1651 aa16.26■□□□□ 0.19
CIRBP-218ENST00000588344 SUPT5HO00267 1087 aaKnown RBP16.2■□□□□ 0.18
CIRBP-218ENST00000588344 TOP2AP11388 1531 aaKnown RBP16.18■□□□□ 0.18
CIRBP-218ENST00000588344 CADPSQ9ULU8 1353 aa16.03■□□□□ 0.16
CIRBP-218ENST00000588344 CCDC88BA6NC98 1476 aa16.02■□□□□ 0.15
CIRBP-218ENST00000588344 LAMC3Q9Y6N6 1575 aa15.96■□□□□ 0.14
CIRBP-218ENST00000588344 PDS5BQ9NTI5 1447 aa15.94■□□□□ 0.14
CIRBP-218ENST00000588344 CFTRP13569 1480 aa15.94■□□□□ 0.14
CIRBP-218ENST00000588344 NESP48681 1621 aa15.9■□□□□ 0.14
CIRBP-218ENST00000588344 ERCC6Q03468 1493 aa15.86■□□□□ 0.13
CIRBP-218ENST00000588344 FANCD2Q9BXW9 1451 aa15.78■□□□□ 0.12
CIRBP-218ENST00000588344 CEP164Q9UPV0 1460 aa15.74■□□□□ 0.11
CIRBP-218ENST00000588344 MRC2Q9UBG0 1479 aa15.68■□□□□ 0.1
CIRBP-218ENST00000588344 ABCC8Q09428 1581 aa15.65■□□□□ 0.1
CIRBP-218ENST00000588344 CUX2O14529 1486 aa15.64■□□□□ 0.09
CIRBP-218ENST00000588344 KIF21AQ7Z4S6 1674 aa15.62■□□□□ 0.09
CIRBP-218ENST00000588344 PRDM2Q13029 1718 aa15.62■□□□□ 0.09
CIRBP-218ENST00000588344 WDR62O43379 1518 aa15.58■□□□□ 0.09
CIRBP-218ENST00000588344 THOC2Q8NI27 1593 aaKnown RBP15.58■□□□□ 0.08
CIRBP-218ENST00000588344 URB2Q14146 1524 aaKnown RBP15.56■□□□□ 0.08
CIRBP-218ENST00000588344 TOPBP1Q92547 1522 aa15.53■□□□□ 0.08
CIRBP-218ENST00000588344 DNMBPQ6XZF7 1577 aa15.51■□□□□ 0.07
CIRBP-218ENST00000588344 WRNQ14191 1432 aaPredicted RBP eCLIP15.51■□□□□ 0.07
CIRBP-218ENST00000588344 CUX1P39880 1505 aa15.45■□□□□ 0.06
CIRBP-218ENST00000588344 IFT140Q96RY7 1462 aa15.44■□□□□ 0.06
CIRBP-218ENST00000588344 SOGA1O94964 1423 aa15.43■□□□□ 0.06
CIRBP-218ENST00000588344 POLA1P09884 1462 aaPredicted RBP15.41■□□□□ 0.06
CIRBP-218ENST00000588344 FGD5Q6ZNL6 1462 aa15.39■□□□□ 0.05
CIRBP-218ENST00000588344 TOP2BQ02880 1626 aa15.38■□□□□ 0.05
CIRBP-218ENST00000588344 TRIM41Q8WV44 630 aa15.36■□□□□ 0.05
CIRBP-218ENST00000588344 SYNJ1O43426 1573 aa15.33■□□□□ 0.05
CIRBP-218ENST00000588344 BIVM-ERCC5R4GMW8 1640 aa15.33■□□□□ 0.04
CIRBP-218ENST00000588344 RAD54L2Q9Y4B4 1467 aa15.33■□□□□ 0.04
CIRBP-218ENST00000588344 ABCA10Q8WWZ4 1543 aa15.3■□□□□ 0.04
CIRBP-218ENST00000588344 TARBP1Q13395 1621 aaKnown RBP15.29■□□□□ 0.04
CIRBP-218ENST00000588344 TDRD9Q8NDG6 1382 aaKnown RBP15.28■□□□□ 0.04
CIRBP-218ENST00000588344 WDR97A6NE52 1622 aa15.27■□□□□ 0.03
CIRBP-218ENST00000588344 ZNF608Q9ULD9 1512 aaPredicted RBP15.27■□□□□ 0.03
CIRBP-218ENST00000588344 AQRO60306 1485 aaKnown RBP eCLIP15.26■□□□□ 0.035e-13■■■■■ 40.7
CIRBP-218ENST00000588344 CHIC1Q5VXU3 224 aa15.25■□□□□ 0.03
CIRBP-218ENST00000588344 GAPVD1Q14C86 1478 aa15.21■□□□□ 0.03
CIRBP-218ENST00000588344 KIF27Q86VH2 1401 aa15.21■□□□□ 0.03
CIRBP-218ENST00000588344 GRIN2BQ13224 1484 aa15.2■□□□□ 0.02
CIRBP-218ENST00000588344 EIF4G3O43432 1585 aaKnown RBP15.16■□□□□ 0.02
CIRBP-218ENST00000588344 MAGI1Q96QZ7 1491 aaPredicted RBP15.14■□□□□ 0.01
CIRBP-218ENST00000588344 CHMP7Q8WUX9 453 aaPredicted RBP15.13■□□□□ 0.01
CIRBP-218ENST00000588344 IGF1RP08069 1367 aa15.12■□□□□ 0.01
CIRBP-218ENST00000588344 ABCA5Q8WWZ7 1642 aa15.12■□□□□ 0.01
CIRBP-218ENST00000588344 ERICH3Q5RHP9 1530 aa15.12■□□□□ 0.01
CIRBP-218ENST00000588344 OSCARQ8IYS5 282 aa15.11■□□□□ 0.01
CIRBP-218ENST00000588344 FBLN2P98095 1184 aa15.1■□□□□ 0.01
CIRBP-218ENST00000588344 SNAPC4Q5SXM2 1469 aa15.09■□□□□ 0.01
CIRBP-218ENST00000588344 FHAD1B1AJZ9 1412 aa15.08■□□□□ 0
CIRBP-218ENST00000588344 EEA1Q15075 1411 aa15.08■□□□□ 0
CIRBP-218ENST00000588344 SYNJ2O15056 1496 aa15.07■□□□□ 0
CIRBP-218ENST00000588344 CSRNP3Q8WYN3 585 aa15.05■□□□□ -0
CIRBP-218ENST00000588344 CARMIL1Q5VZK9 1371 aa15.03■□□□□ -0
CIRBP-218ENST00000588344 PBRM1Q86U86 1689 aa15□□□□□ -0.01
CIRBP-218ENST00000588344 RUSC2Q8N2Y8 1516 aa15□□□□□ -0.01
CIRBP-218ENST00000588344 DNAJC5Q9H3Z4 198 aa14.99□□□□□ -0.01
CIRBP-218ENST00000588344 GRIN2AQ12879 1464 aa14.97□□□□□ -0.01
CIRBP-218ENST00000588344 ADAMTS12P58397 1594 aa14.97□□□□□ -0.01
CIRBP-218ENST00000588344 CUL7Q14999 1698 aa14.95□□□□□ -0.02
CIRBP-218ENST00000588344 RAPGEF2Q9Y4G8 1499 aa14.95□□□□□ -0.02
CIRBP-218ENST00000588344 FAM9AQ8IZU1 332 aaPredicted RBP14.94□□□□□ -0.02
CIRBP-218ENST00000588344 PRXQ9BXM0 1461 aa14.93□□□□□ -0.02
CIRBP-218ENST00000588344 NUP160Q12769 1436 aa14.92□□□□□ -0.02
CIRBP-218ENST00000588344 AEBP2Q6ZN18 517 aaPredicted RBP14.91□□□□□ -0.02
CIRBP-218ENST00000588344 CHD1O14646 1710 aa14.86□□□□□ -0.03
CIRBP-218ENST00000588344 JPH4Q96JJ6 628 aa14.86□□□□□ -0.03
CIRBP-218ENST00000588344 KIAA0586Q9BVV6 1533 aa14.85□□□□□ -0.03
CIRBP-218ENST00000588344 CLASP1Q7Z460 1538 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms