RNA–Protein interactions for RNA: ENST00000593093.5

CIRBP-242, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,528 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-242ENST00000593093 NISCHQ9Y2I1 1504 aa27.09■■□□□ 1.93
CIRBP-242ENST00000593093 SHROOM4Q9ULL8 1493 aa24.4■■□□□ 1.5
CIRBP-242ENST00000593093 SUPT5HO00267 1087 aaKnown RBP24.36■■□□□ 1.49
CIRBP-242ENST00000593093 DCAF8L2P0C7V8 631 aa23.84■■□□□ 1.41
CIRBP-242ENST00000593093 PCGF6Q9BYE7 350 aa23.83■■□□□ 1.41
CIRBP-242ENST00000593093 HRCP23327 699 aa23.72■■□□□ 1.39
CIRBP-242ENST00000593093 PPARGC1BQ86YN6 1023 aaKnown RBP23.7■■□□□ 1.38
CIRBP-242ENST00000593093 CHIC1Q5VXU3 224 aa23.3■■□□□ 1.32
CIRBP-242ENST00000593093 PELP1Q8IZL8 1130 aaKnown RBP23.17■■□□□ 1.3
CIRBP-242ENST00000593093 LOC105371045A0A1W2PR82 267 aa23.15■■□□□ 1.3
CIRBP-242ENST00000593093 MYO15BQ96JP2 1530 aa23.13■■□□□ 1.29
CIRBP-242ENST00000593093 EHMT2Q96KQ7 1210 aa22.99■■□□□ 1.27
CIRBP-242ENST00000593093 CCDC180Q9P1Z9 1646 aa22.77■■□□□ 1.24
CIRBP-242ENST00000593093 ZCCHC6Q5VYS8 1495 aaKnown RBP22.74■■□□□ 1.23
CIRBP-242ENST00000593093 FAM9AQ8IZU1 332 aaPredicted RBP22.71■■□□□ 1.23
CIRBP-242ENST00000593093 TRIM26Q12899 539 aaPredicted RBP22.69■■□□□ 1.22
CIRBP-242ENST00000593093 SCAF1Q9H7N4 1312 aaKnown RBP22.45■■□□□ 1.18
CIRBP-242ENST00000593093 MYT1Q01538 1121 aa22.44■■□□□ 1.18
CIRBP-242ENST00000593093 ZEB1P37275 1124 aaPredicted RBP22.36■■□□□ 1.17
CIRBP-242ENST00000593093 TTBK1Q5TCY1 1321 aaPredicted RBP22.32■■□□□ 1.16
CIRBP-242ENST00000593093 DCAF1Q9Y4B6 1507 aa22.31■■□□□ 1.16
CIRBP-242ENST00000593093 ABCC9O60706 1549 aa22.3■■□□□ 1.16
CIRBP-242ENST00000593093 TRIM41Q8WV44 630 aa22.29■■□□□ 1.16
CIRBP-242ENST00000593093 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.15■■□□□ 1.14
CIRBP-242ENST00000593093 CCER1Q8TC90 406 aaPredicted RBP22.13■■□□□ 1.13
CIRBP-242ENST00000593093 NEUROD1Q13562 356 aa22.02■■□□□ 1.12
CIRBP-242ENST00000593093 GTF3C3Q9Y5Q9 886 aa22■■□□□ 1.11
CIRBP-242ENST00000593093 YTHDC1Q96MU7 727 aaKnown RBP21.98■■□□□ 1.11
CIRBP-242ENST00000593093 SCRIBQ14160 1630 aa21.96■■□□□ 1.11
CIRBP-242ENST00000593093 ACIN1Q9UKV3 1341 aaKnown RBP21.94■■□□□ 1.1
CIRBP-242ENST00000593093 CENPBP07199 599 aaPredicted RBP21.89■■□□□ 1.09
CIRBP-242ENST00000593093 DIEXFQ68CQ4 756 aaKnown RBP21.86■■□□□ 1.09
CIRBP-242ENST00000593093 PABPN1Q86U42 306 aaKnown RBP eCLIP21.55■■□□□ 1.041e-14■■□□□ 14.3
CIRBP-242ENST00000593093 RSF1Q96T23 1441 aaPredicted RBP21.47■■□□□ 1.03
CIRBP-242ENST00000593093 CECR2Q9BXF3 1484 aa21.44■■□□□ 1.02
CIRBP-242ENST00000593093 HNRNPUL2Q1KMD3 747 aaKnown RBP21.41■■□□□ 1.02
CIRBP-242ENST00000593093 RANGAP1P46060 587 aaPredicted RBP21.4■■□□□ 1.02
CIRBP-242ENST00000593093 UBTFP17480 764 aaKnown RBP21.38■■□□□ 1.01
CIRBP-242ENST00000593093 NACADO15069 1562 aa21.36■■□□□ 1.01
CIRBP-242ENST00000593093 ZNF316A6NFI3 1004 aaPredicted RBP21.34■■□□□ 1.01
CIRBP-242ENST00000593093 MIER1Q8N108 512 aa21.3■■□□□ 1
CIRBP-242ENST00000593093 BCL11AQ9H165 835 aa21.26■□□□□ 0.99
CIRBP-242ENST00000593093 RB1CC1Q8TDY2 1594 aa21.21■□□□□ 0.99
CIRBP-242ENST00000593093 MROH2BQ7Z745 1585 aa21.2■□□□□ 0.98
CIRBP-242ENST00000593093 WIZO95785 1651 aa21.05■□□□□ 0.96
CIRBP-242ENST00000593093 APLP2Q06481 763 aa21.04■□□□□ 0.96
CIRBP-242ENST00000593093 BCANQ96GW7 911 aa20.96■□□□□ 0.95
CIRBP-242ENST00000593093 PRKCSHP14314 528 aaPredicted RBP20.94■□□□□ 0.94
CIRBP-242ENST00000593093 CEP162Q5TB80 1403 aa20.88■□□□□ 0.93
CIRBP-242ENST00000593093 CSRNP3Q8WYN3 585 aa20.87■□□□□ 0.93
CIRBP-242ENST00000593093 ITGAEP38570 1179 aa20.83■□□□□ 0.93
CIRBP-242ENST00000593093 BAZ1AQ9NRL2 1556 aaPredicted RBP20.82■□□□□ 0.92
CIRBP-242ENST00000593093 SOGA1O94964 1423 aa20.77■□□□□ 0.92
CIRBP-242ENST00000593093 SUPT16HQ9Y5B9 1047 aaKnown RBP20.77■□□□□ 0.92
CIRBP-242ENST00000593093 CCDC88BA6NC98 1476 aa20.73■□□□□ 0.91
CIRBP-242ENST00000593093 ABCC8Q09428 1581 aa20.71■□□□□ 0.91
CIRBP-242ENST00000593093 UNC13AQ9UPW8 1703 aa20.69■□□□□ 0.9
CIRBP-242ENST00000593093 SMARCA4P51532 1647 aa20.65■□□□□ 0.9
CIRBP-242ENST00000593093 ANP32EQ9BTT0 268 aa20.62■□□□□ 0.89
CIRBP-242ENST00000593093 RUSC2Q8N2Y8 1516 aa20.61■□□□□ 0.89
CIRBP-242ENST00000593093 TNIKQ9UKE5 1360 aa20.61■□□□□ 0.89
CIRBP-242ENST00000593093 TSHZ2Q9NRE2 1034 aa20.61■□□□□ 0.89
CIRBP-242ENST00000593093 KCNH8Q96L42 1107 aa20.59■□□□□ 0.89
CIRBP-242ENST00000593093 FKBP8Q14318 412 aa20.57■□□□□ 0.88
CIRBP-242ENST00000593093 BICRAQ9NZM4 1560 aa20.55■□□□□ 0.88
CIRBP-242ENST00000593093 WRNQ14191 1432 aaPredicted RBP eCLIP20.53■□□□□ 0.881e-6■■■■■ 58.5
CIRBP-242ENST00000593093 TOP2AP11388 1531 aaKnown RBP20.52■□□□□ 0.88
CIRBP-242ENST00000593093 NEFLP07196 543 aa20.48■□□□□ 0.87
CIRBP-242ENST00000593093 HIRIP3Q9BW71 556 aaPredicted RBP20.48■□□□□ 0.87
CIRBP-242ENST00000593093 DDX10Q13206 875 aaKnown RBP20.45■□□□□ 0.86
CIRBP-242ENST00000593093 SMARCA2P51531 1590 aa20.44■□□□□ 0.86
CIRBP-242ENST00000593093 CLIP1P30622 1438 aa20.44■□□□□ 0.86
CIRBP-242ENST00000593093 TRIM52Q96A61 297 aa20.43■□□□□ 0.86
CIRBP-242ENST00000593093 BAZ1BQ9UIG0 1483 aaKnown RBP20.4■□□□□ 0.86
CIRBP-242ENST00000593093 ATP1B4Q9UN42 357 aaPredicted RBP20.39■□□□□ 0.86
CIRBP-242ENST00000593093 GOLGA3Q08378 1498 aa20.38■□□□□ 0.85
CIRBP-242ENST00000593093 ERICH6Q7L0X2 663 aa20.36■□□□□ 0.85
CIRBP-242ENST00000593093 ATAD2BQ9ULI0 1458 aa20.34■□□□□ 0.85
CIRBP-242ENST00000593093 KANK4Q5T7N3 995 aaPredicted RBP20.3■□□□□ 0.84
CIRBP-242ENST00000593093 CLSPNQ9HAW4 1339 aa20.3■□□□□ 0.84
CIRBP-242ENST00000593093 IRX6P78412 446 aaPredicted RBP20.28■□□□□ 0.84
CIRBP-242ENST00000593093 RBM19Q9Y4C8 960 aaKnown RBP20.23■□□□□ 0.83
CIRBP-242ENST00000593093 DHX57Q6P158 1386 aaKnown RBP20.23■□□□□ 0.83
CIRBP-242ENST00000593093 FAM50AQ14320 339 aaKnown RBP20.22■□□□□ 0.83
CIRBP-242ENST00000593093 EEA1Q15075 1411 aa20.21■□□□□ 0.83
CIRBP-242ENST00000593093 SIN3AQ96ST3 1273 aa20.21■□□□□ 0.83
CIRBP-242ENST00000593093 VPS8Q8N3P4 1428 aa20.19■□□□□ 0.82
CIRBP-242ENST00000593093 EIF4G1Q04637 1599 aaKnown RBP20.15■□□□□ 0.82
CIRBP-242ENST00000593093 CEP164Q9UPV0 1460 aa20.14■□□□□ 0.82
CIRBP-242ENST00000593093 CNGB1Q14028 1251 aaPredicted RBP20.14■□□□□ 0.81
CIRBP-242ENST00000593093 ANP32CO43423 234 aa20.13■□□□□ 0.81
CIRBP-242ENST00000593093 RAPGEF2Q9Y4G8 1499 aa20.1■□□□□ 0.81
CIRBP-242ENST00000593093 P3H3Q8IVL6 736 aa20.07■□□□□ 0.8
CIRBP-242ENST00000593093 SYNJ1O43426 1573 aa20.03■□□□□ 0.8
CIRBP-242ENST00000593093 HNRNPUQ00839 825 aaKnown RBP eCLIP20.03■□□□□ 0.8
CIRBP-242ENST00000593093 ANO8Q9HCE9 1232 aaPredicted RBP20.01■□□□□ 0.79
CIRBP-242ENST00000593093 CDK11AQ9UQ88 783 aaPredicted RBP20.01■□□□□ 0.79
CIRBP-242ENST00000593093 PEG3Q9GZU2 1588 aa19.96■□□□□ 0.79
CIRBP-242ENST00000593093 CCNB3Q8WWL7 1395 aa19.93■□□□□ 0.78
CIRBP-242ENST00000593093 RAB3GAP2Q9H2M9 1393 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms