RNA–Protein interactions for RNA: ENST00000593283.5

CIRBP-244, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-244ENST00000593283 NISCHQ9Y2I1 1504 aa43.88■■■■■ 4.61
CIRBP-244ENST00000593283 CCDC180Q9P1Z9 1646 aa39.28■■■■□ 3.88
CIRBP-244ENST00000593283 ABCC9O60706 1549 aa38.73■■■■□ 3.79
CIRBP-244ENST00000593283 RB1CC1Q8TDY2 1594 aa37.1■■■■□ 3.53
CIRBP-244ENST00000593283 NACADO15069 1562 aa36.94■■■■□ 3.5
CIRBP-244ENST00000593283 DCAF8L2P0C7V8 631 aa36.7■■■■□ 3.47
CIRBP-244ENST00000593283 MYO15BQ96JP2 1530 aa36.57■■■■□ 3.44
CIRBP-244ENST00000593283 ZCCHC6Q5VYS8 1495 aaKnown RBP36.51■■■■□ 3.44
CIRBP-244ENST00000593283 UNC13AQ9UPW8 1703 aa36.38■■■■□ 3.41
CIRBP-244ENST00000593283 DCAF1Q9Y4B6 1507 aa36.28■■■■□ 3.4
CIRBP-244ENST00000593283 PABPN1Q86U42 306 aaKnown RBP eCLIP36.05■■■■□ 3.36
CIRBP-244ENST00000593283 BICRAQ9NZM4 1560 aa36.02■■■■□ 3.36
CIRBP-244ENST00000593283 DNAJC5BQ9UF47 199 aa35.82■■■■□ 3.32
CIRBP-244ENST00000593283 SCRIBQ14160 1630 aa35.81■■■■□ 3.32
CIRBP-244ENST00000593283 SHROOM4Q9ULL8 1493 aa35.56■■■■□ 3.28
CIRBP-244ENST00000593283 EIF4G1Q04637 1599 aaKnown RBP35.08■■■■□ 3.21
CIRBP-244ENST00000593283 CC2D2AQ9P2K1 1620 aa35.06■■■■□ 3.2
CIRBP-244ENST00000593283 CECR2Q9BXF3 1484 aa34.83■■■■□ 3.17
CIRBP-244ENST00000593283 SMARCA4P51532 1647 aa34.19■■■■□ 3.06
CIRBP-244ENST00000593283 BAZ1AQ9NRL2 1556 aaPredicted RBP34.06■■■■□ 3.04
CIRBP-244ENST00000593283 NCAPD3P42695 1498 aa34.04■■■■□ 3.04
CIRBP-244ENST00000593283 ATAD2BQ9ULI0 1458 aa34.04■■■■□ 3.04
CIRBP-244ENST00000593283 SMARCA2P51531 1590 aa34■■■■□ 3.03
CIRBP-244ENST00000593283 HMGXB3Q12766 1538 aa33.92■■■■□ 3.02
CIRBP-244ENST00000593283 MROH2BQ7Z745 1585 aa33.84■■■■□ 3.01
CIRBP-244ENST00000593283 PEG3Q9GZU2 1588 aa33.83■■■■□ 3.01
CIRBP-244ENST00000593283 BAZ1BQ9UIG0 1483 aaKnown RBP33.76■■■□□ 2.99
CIRBP-244ENST00000593283 WIZO95785 1651 aa33.49■■■□□ 2.95
CIRBP-244ENST00000593283 NESP48681 1621 aa33.42■■■□□ 2.94
CIRBP-244ENST00000593283 ERCC6Q03468 1493 aa33.41■■■□□ 2.94
CIRBP-244ENST00000593283 LAMC3Q9Y6N6 1575 aa33.27■■■□□ 2.92
CIRBP-244ENST00000593283 RSF1Q96T23 1441 aaPredicted RBP33.26■■■□□ 2.91
CIRBP-244ENST00000593283 CUX2O14529 1486 aa33.19■■■□□ 2.9
CIRBP-244ENST00000593283 KIF21AQ7Z4S6 1674 aa33.1■■■□□ 2.89
CIRBP-244ENST00000593283 TOP2AP11388 1531 aaKnown RBP33.09■■■□□ 2.89
CIRBP-244ENST00000593283 THOC2Q8NI27 1593 aaKnown RBP33.06■■■□□ 2.88
CIRBP-244ENST00000593283 CADPSQ9ULU8 1353 aa33.01■■■□□ 2.88
CIRBP-244ENST00000593283 PDS5BQ9NTI5 1447 aa32.99■■■□□ 2.87
CIRBP-244ENST00000593283 CFTRP13569 1480 aa32.77■■■□□ 2.84
CIRBP-244ENST00000593283 MRC2Q9UBG0 1479 aa32.74■■■□□ 2.83
CIRBP-244ENST00000593283 CEP164Q9UPV0 1460 aa32.71■■■□□ 2.83
CIRBP-244ENST00000593283 FANCD2Q9BXW9 1451 aa32.7■■■□□ 2.83
CIRBP-244ENST00000593283 WDR62O43379 1518 aa32.67■■■□□ 2.82
CIRBP-244ENST00000593283 PRDM2Q13029 1718 aa32.67■■■□□ 2.82
CIRBP-244ENST00000593283 CCDC88BA6NC98 1476 aa32.65■■■□□ 2.82
CIRBP-244ENST00000593283 DNAJC5Q9H3Z4 198 aa32.53■■■□□ 2.8
CIRBP-244ENST00000593283 URB2Q14146 1524 aaKnown RBP32.42■■■□□ 2.78
CIRBP-244ENST00000593283 TOPBP1Q92547 1522 aa32.15■■■□□ 2.74
CIRBP-244ENST00000593283 DNMBPQ6XZF7 1577 aa32.1■■■□□ 2.73
CIRBP-244ENST00000593283 SUPT5HO00267 1087 aaKnown RBP32.07■■■□□ 2.72
CIRBP-244ENST00000593283 ABCC8Q09428 1581 aa32.05■■■□□ 2.72
CIRBP-244ENST00000593283 IFT140Q96RY7 1462 aa32.02■■■□□ 2.72
CIRBP-244ENST00000593283 ZNF608Q9ULD9 1512 aaPredicted RBP31.94■■■□□ 2.7
CIRBP-244ENST00000593283 TARBP1Q13395 1621 aaKnown RBP31.86■■■□□ 2.69
CIRBP-244ENST00000593283 EIF4G3O43432 1585 aaKnown RBP31.85■■■□□ 2.69
CIRBP-244ENST00000593283 POLA1P09884 1462 aaPredicted RBP31.84■■■□□ 2.69
CIRBP-244ENST00000593283 CUX1P39880 1505 aa31.79■■■□□ 2.68
CIRBP-244ENST00000593283 FGD5Q6ZNL6 1462 aa31.72■■■□□ 2.67
CIRBP-244ENST00000593283 RAD54L2Q9Y4B4 1467 aa31.7■■■□□ 2.66
CIRBP-244ENST00000593283 AQRO60306 1485 aaKnown RBP eCLIP31.66■■■□□ 2.666e-10■■■■■ 30.9
CIRBP-244ENST00000593283 SOGA1O94964 1423 aa31.64■■■□□ 2.66
CIRBP-244ENST00000593283 OSCARQ8IYS5 282 aa31.63■■■□□ 2.65
CIRBP-244ENST00000593283 WDR97A6NE52 1622 aa31.57■■■□□ 2.64
CIRBP-244ENST00000593283 CHD1O14646 1710 aa31.57■■■□□ 2.64
CIRBP-244ENST00000593283 TDRD9Q8NDG6 1382 aaKnown RBP31.52■■■□□ 2.64
CIRBP-244ENST00000593283 BIVM-ERCC5R4GMW8 1640 aa31.44■■■□□ 2.62
CIRBP-244ENST00000593283 SNAPC4Q5SXM2 1469 aa31.41■■■□□ 2.62
CIRBP-244ENST00000593283 SYNJ1O43426 1573 aa31.41■■■□□ 2.62
CIRBP-244ENST00000593283 TOP2BQ02880 1626 aa31.41■■■□□ 2.62
CIRBP-244ENST00000593283 PBRM1Q86U86 1689 aa31.4■■■□□ 2.62
CIRBP-244ENST00000593283 WRNQ14191 1432 aaPredicted RBP eCLIP31.38■■■□□ 2.611e-6■■■■■ 58.5
CIRBP-244ENST00000593283 ABCA10Q8WWZ4 1543 aa31.38■■■□□ 2.61
CIRBP-244ENST00000593283 ABCA5Q8WWZ7 1642 aa31.36■■■□□ 2.61
CIRBP-244ENST00000593283 GRIN2BQ13224 1484 aa31.36■■■□□ 2.61
CIRBP-244ENST00000593283 RIMBP3CA6NJZ7 1639 aa31.35■■■□□ 2.61
CIRBP-244ENST00000593283 RIMBP3BA6NNM3 1639 aa31.35■■■□□ 2.61
CIRBP-244ENST00000593283 RIMBP3Q9UFD9 1639 aa31.35■■■□□ 2.61
CIRBP-244ENST00000593283 MAGI1Q96QZ7 1491 aaPredicted RBP31.33■■■□□ 2.61
CIRBP-244ENST00000593283 TRIM41Q8WV44 630 aa31.33■■■□□ 2.61
CIRBP-244ENST00000593283 GAPVD1Q14C86 1478 aa31.31■■■□□ 2.6
CIRBP-244ENST00000593283 FBLN2P98095 1184 aa31.3■■■□□ 2.6
CIRBP-244ENST00000593283 ARHGEF11O15085 1522 aa31.26■■■□□ 2.59
CIRBP-244ENST00000593283 SYNJ2O15056 1496 aa31.21■■■□□ 2.59
CIRBP-244ENST00000593283 CLASP1Q7Z460 1538 aa31.15■■■□□ 2.58
CIRBP-244ENST00000593283 CHMP7Q8WUX9 453 aaPredicted RBP31.14■■■□□ 2.58
CIRBP-244ENST00000593283 ADAMTS12P58397 1594 aa31.09■■■□□ 2.57
CIRBP-244ENST00000593283 ERICH3Q5RHP9 1530 aa30.99■■■□□ 2.55
CIRBP-244ENST00000593283 ARAP1Q96P48 1450 aa30.99■■■□□ 2.55
CIRBP-244ENST00000593283 GRIN2AQ12879 1464 aa30.98■■■□□ 2.55
CIRBP-244ENST00000593283 FHAD1B1AJZ9 1412 aa30.92■■■□□ 2.54
CIRBP-244ENST00000593283 CEP170Q5SW79 1584 aa30.88■■■□□ 2.53
CIRBP-244ENST00000593283 CYB5RLQ6IPT4 315 aa30.87■■■□□ 2.53
CIRBP-244ENST00000593283 NUP160Q12769 1436 aa30.84■■■□□ 2.53
CIRBP-244ENST00000593283 KIF27Q86VH2 1401 aa30.73■■■□□ 2.51
CIRBP-244ENST00000593283 SHROOM2Q13796 1616 aa30.72■■■□□ 2.51
CIRBP-244ENST00000593283 ERCC6L2Q5T890 1561 aa30.7■■■□□ 2.5
CIRBP-244ENST00000593283 CUL7Q14999 1698 aa30.69■■■□□ 2.5
CIRBP-244ENST00000593283 RUSC2Q8N2Y8 1516 aa30.65■■■□□ 2.5
CIRBP-244ENST00000593283 IGF1RP08069 1367 aa30.62■■■□□ 2.49
CIRBP-244ENST00000593283 PRG4Q92954 1404 aaPredicted RBP30.48■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 162 ms