RNA–Protein interactions for RNA: ENST00000337970.7

HNRNPF-201, Transcript of heterogeneous nuclear ribonucleoprotein F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HNRNPF, Length 2,186 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPF-201ENST00000337970 NISCHQ9Y2I1 1504 aa34.26■■■■□ 3.07
HNRNPF-201ENST00000337970 CCDC180Q9P1Z9 1646 aa29.54■■■□□ 2.32
HNRNPF-201ENST00000337970 ZCCHC6Q5VYS8 1495 aaKnown RBP28.89■■■□□ 2.22
HNRNPF-201ENST00000337970 SHROOM4Q9ULL8 1493 aa28.4■■■□□ 2.14
HNRNPF-201ENST00000337970 DCAF1Q9Y4B6 1507 aa28.31■■■□□ 2.12
HNRNPF-201ENST00000337970 DCAF8L2P0C7V8 631 aa28.15■■■□□ 2.1
HNRNPF-201ENST00000337970 MYO15BQ96JP2 1530 aa27.75■■■□□ 2.03
HNRNPF-201ENST00000337970 SUPT5HO00267 1087 aaKnown RBP27.62■■■□□ 2.01
HNRNPF-201ENST00000337970 ABCC9O60706 1549 aa27.49■■□□□ 1.99
HNRNPF-201ENST00000337970 NACADO15069 1562 aa27.41■■□□□ 1.98
HNRNPF-201ENST00000337970 SCRIBQ14160 1630 aa27.3■■□□□ 1.96
HNRNPF-201ENST00000337970 RB1CC1Q8TDY2 1594 aa27.03■■□□□ 1.92
HNRNPF-201ENST00000337970 RSF1Q96T23 1441 aaPredicted RBP26.82■■□□□ 1.88
HNRNPF-201ENST00000337970 CHIC1Q5VXU3 224 aa26.75■■□□□ 1.87
HNRNPF-201ENST00000337970 CECR2Q9BXF3 1484 aa26.6■■□□□ 1.85
HNRNPF-201ENST00000337970 UNC13AQ9UPW8 1703 aa26.51■■□□□ 1.83
HNRNPF-201ENST00000337970 MROH2BQ7Z745 1585 aa26.5■■□□□ 1.83
HNRNPF-201ENST00000337970 BAZ1AQ9NRL2 1556 aaPredicted RBP26.38■■□□□ 1.81
HNRNPF-201ENST00000337970 WIZO95785 1651 aa26.3■■□□□ 1.8
HNRNPF-201ENST00000337970 BICRAQ9NZM4 1560 aa26.24■■□□□ 1.79
HNRNPF-201ENST00000337970 SMARCA4P51532 1647 aa26.19■■□□□ 1.78
HNRNPF-201ENST00000337970 PABPN1Q86U42 306 aaKnown RBP eCLIP26.08■■□□□ 1.77
HNRNPF-201ENST00000337970 TOP2AP11388 1531 aaKnown RBP26.03■■□□□ 1.76
HNRNPF-201ENST00000337970 TRIM41Q8WV44 630 aa25.91■■□□□ 1.74
HNRNPF-201ENST00000337970 PEG3Q9GZU2 1588 aa25.85■■□□□ 1.73
HNRNPF-201ENST00000337970 EIF4G1Q04637 1599 aaKnown RBP25.84■■□□□ 1.73
HNRNPF-201ENST00000337970 SMARCA2P51531 1590 aa25.82■■□□□ 1.72
HNRNPF-201ENST00000337970 CCDC88BA6NC98 1476 aa25.81■■□□□ 1.72
HNRNPF-201ENST00000337970 LOC105371045A0A1W2PR82 267 aa25.77■■□□□ 1.72
HNRNPF-201ENST00000337970 ATAD2BQ9ULI0 1458 aa25.65■■□□□ 1.7
HNRNPF-201ENST00000337970 BAZ1BQ9UIG0 1483 aaKnown RBP25.51■■□□□ 1.67
HNRNPF-201ENST00000337970 FAM9AQ8IZU1 332 aaPredicted RBP25.48■■□□□ 1.67
HNRNPF-201ENST00000337970 ABCC8Q09428 1581 aa25.45■■□□□ 1.66
HNRNPF-201ENST00000337970 NCAPD3P42695 1498 aa25.33■■□□□ 1.64
HNRNPF-201ENST00000337970 HMGXB3Q12766 1538 aa25.3■■□□□ 1.64
HNRNPF-201ENST00000337970 WRNQ14191 1432 aaPredicted RBP eCLIP25.22■■□□□ 1.631e-6■■■■□ 21.4
HNRNPF-201ENST00000337970 PCGF6Q9BYE7 350 aa25.19■■□□□ 1.62
HNRNPF-201ENST00000337970 EEA1Q15075 1411 aa25.15■■□□□ 1.62
HNRNPF-201ENST00000337970 SOGA1O94964 1423 aa25.11■■□□□ 1.61
HNRNPF-201ENST00000337970 EHMT2Q96KQ7 1210 aa25.1■■□□□ 1.61
HNRNPF-201ENST00000337970 SYNJ1O43426 1573 aa25.08■■□□□ 1.61
HNRNPF-201ENST00000337970 TRIM26Q12899 539 aaPredicted RBP25.03■■□□□ 1.6
HNRNPF-201ENST00000337970 CSRNP3Q8WYN3 585 aa25■■□□□ 1.59
HNRNPF-201ENST00000337970 RUSC2Q8N2Y8 1516 aa24.99■■□□□ 1.59
HNRNPF-201ENST00000337970 HRCP23327 699 aa24.94■■□□□ 1.58
HNRNPF-201ENST00000337970 CFTRP13569 1480 aa24.93■■□□□ 1.58
HNRNPF-201ENST00000337970 TOP2BQ02880 1626 aa24.92■■□□□ 1.58
HNRNPF-201ENST00000337970 TNIKQ9UKE5 1360 aa24.89■■□□□ 1.58
HNRNPF-201ENST00000337970 BIVM-ERCC5R4GMW8 1640 aa24.87■■□□□ 1.57
HNRNPF-201ENST00000337970 CC2D2AQ9P2K1 1620 aa24.87■■□□□ 1.57
HNRNPF-201ENST00000337970 GOLGA3Q08378 1498 aa24.83■■□□□ 1.57
HNRNPF-201ENST00000337970 CEP162Q5TB80 1403 aa24.79■■□□□ 1.56
HNRNPF-201ENST00000337970 KIF21BO75037 1637 aa24.78■■□□□ 1.56
HNRNPF-201ENST00000337970 CEP164Q9UPV0 1460 aa24.77■■□□□ 1.56
HNRNPF-201ENST00000337970 PRDM2Q13029 1718 aa24.77■■□□□ 1.56
HNRNPF-201ENST00000337970 CUX1P39880 1505 aa24.74■■□□□ 1.55
HNRNPF-201ENST00000337970 UBTFP17480 764 aaKnown RBP24.73■■□□□ 1.55
HNRNPF-201ENST00000337970 CADPSQ9ULU8 1353 aa24.72■■□□□ 1.55
HNRNPF-201ENST00000337970 RAPGEF2Q9Y4G8 1499 aa24.57■■□□□ 1.52
HNRNPF-201ENST00000337970 KIF27Q86VH2 1401 aa24.52■■□□□ 1.52
HNRNPF-201ENST00000337970 PRXQ9BXM0 1461 aa24.52■■□□□ 1.52
HNRNPF-201ENST00000337970 ERICH3Q5RHP9 1530 aa24.51■■□□□ 1.51
HNRNPF-201ENST00000337970 PPARGC1BQ86YN6 1023 aaKnown RBP24.5■■□□□ 1.51
HNRNPF-201ENST00000337970 CLIP1P30622 1438 aa24.47■■□□□ 1.51
HNRNPF-201ENST00000337970 FANCD2Q9BXW9 1451 aa24.44■■□□□ 1.5
HNRNPF-201ENST00000337970 FGD5Q6ZNL6 1462 aa24.37■■□□□ 1.49
HNRNPF-201ENST00000337970 VPS8Q8N3P4 1428 aa24.34■■□□□ 1.49
HNRNPF-201ENST00000337970 LAMC3Q9Y6N6 1575 aa24.33■■□□□ 1.49
HNRNPF-201ENST00000337970 CUX2O14529 1486 aa24.33■■□□□ 1.49
HNRNPF-201ENST00000337970 ZEB1P37275 1124 aaPredicted RBP24.33■■□□□ 1.48
HNRNPF-201ENST00000337970 NESP48681 1621 aa24.33■■□□□ 1.48
HNRNPF-201ENST00000337970 DNMBPQ6XZF7 1577 aa24.31■■□□□ 1.48
HNRNPF-201ENST00000337970 IGF1RP08069 1367 aa24.28■■□□□ 1.48
HNRNPF-201ENST00000337970 TOPBP1Q92547 1522 aa24.25■■□□□ 1.47
HNRNPF-201ENST00000337970 POLA1P09884 1462 aaPredicted RBP24.18■■□□□ 1.46
HNRNPF-201ENST00000337970 ABCA10Q8WWZ4 1543 aa24.17■■□□□ 1.46
HNRNPF-201ENST00000337970 TTBK1Q5TCY1 1321 aaPredicted RBP24.17■■□□□ 1.46
HNRNPF-201ENST00000337970 ARAP1Q96P48 1450 aa24.16■■□□□ 1.46
HNRNPF-201ENST00000337970 PDS5BQ9NTI5 1447 aa24.15■■□□□ 1.46
HNRNPF-201ENST00000337970 RANGAP1P46060 587 aaPredicted RBP24.15■■□□□ 1.46
HNRNPF-201ENST00000337970 CARMIL1Q5VZK9 1371 aa24.15■■□□□ 1.46
HNRNPF-201ENST00000337970 DNAJC5BQ9UF47 199 aa24.14■■□□□ 1.45
HNRNPF-201ENST00000337970 RAD54L2Q9Y4B4 1467 aa24.11■■□□□ 1.45
HNRNPF-201ENST00000337970 APLP2Q06481 763 aa24.11■■□□□ 1.45
HNRNPF-201ENST00000337970 URB2Q14146 1524 aaKnown RBP24.11■■□□□ 1.45
HNRNPF-201ENST00000337970 ARHGAP35Q9NRY4 1499 aa24.05■■□□□ 1.44
HNRNPF-201ENST00000337970 WDR97A6NE52 1622 aa24■■□□□ 1.43
HNRNPF-201ENST00000337970 KIF21AQ7Z4S6 1674 aa23.99■■□□□ 1.43
HNRNPF-201ENST00000337970 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.98■■□□□ 1.43
HNRNPF-201ENST00000337970 CUL7Q14999 1698 aa23.98■■□□□ 1.43
HNRNPF-201ENST00000337970 CCER1Q8TC90 406 aaPredicted RBP23.94■■□□□ 1.42
HNRNPF-201ENST00000337970 ABCA5Q8WWZ7 1642 aa23.91■■□□□ 1.42
HNRNPF-201ENST00000337970 GAPVD1Q14C86 1478 aa23.85■■□□□ 1.41
HNRNPF-201ENST00000337970 TDRD9Q8NDG6 1382 aaKnown RBP23.84■■□□□ 1.41
HNRNPF-201ENST00000337970 TARBP1Q13395 1621 aaKnown RBP23.83■■□□□ 1.4
HNRNPF-201ENST00000337970 KANK4Q5T7N3 995 aaPredicted RBP23.82■■□□□ 1.4
HNRNPF-201ENST00000337970 MRC2Q9UBG0 1479 aa23.81■■□□□ 1.4
HNRNPF-201ENST00000337970 MAP3K1Q13233 1512 aa23.8■■□□□ 1.4
HNRNPF-201ENST00000337970 CTTNBP2Q8WZ74 1663 aa23.78■■□□□ 1.4
HNRNPF-201ENST00000337970 EFCAB5A4FU69 1503 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms