RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 NISCHQ9Y2I1 1504 aa29.09■■■□□ 2.25
CIRBP-228ENST00000590347 PPARGC1BQ86YN6 1023 aaKnown RBP25.93■■□□□ 1.74
CIRBP-228ENST00000590347 HRCP23327 699 aa25.88■■□□□ 1.73
CIRBP-228ENST00000590347 PCGF6Q9BYE7 350 aa25.55■■□□□ 1.68
CIRBP-228ENST00000590347 PELP1Q8IZL8 1130 aaKnown RBP25.24■■□□□ 1.63
CIRBP-228ENST00000590347 SUPT5HO00267 1087 aaKnown RBP25.21■■□□□ 1.63
CIRBP-228ENST00000590347 SHROOM4Q9ULL8 1493 aa25.18■■□□□ 1.62
CIRBP-228ENST00000590347 DCAF8L2P0C7V8 631 aa25.08■■□□□ 1.61
CIRBP-228ENST00000590347 SCAF1Q9H7N4 1312 aaKnown RBP24.98■■□□□ 1.59
CIRBP-228ENST00000590347 MYO15BQ96JP2 1530 aa24.81■■□□□ 1.56
CIRBP-228ENST00000590347 CCDC180Q9P1Z9 1646 aa24.58■■□□□ 1.53
CIRBP-228ENST00000590347 CHIC1Q5VXU3 224 aa24.51■■□□□ 1.51
CIRBP-228ENST00000590347 ZCCHC6Q5VYS8 1495 aaKnown RBP24.46■■□□□ 1.51
CIRBP-228ENST00000590347 LOC105371045A0A1W2PR82 267 aa24.42■■□□□ 1.5
CIRBP-228ENST00000590347 MYT1Q01538 1121 aa24.19■■□□□ 1.46
CIRBP-228ENST00000590347 NEUROD1Q13562 356 aa24.17■■□□□ 1.46
CIRBP-228ENST00000590347 TRIM26Q12899 539 aaPredicted RBP24.13■■□□□ 1.45
CIRBP-228ENST00000590347 GTF3C3Q9Y5Q9 886 aa24.1■■□□□ 1.45
CIRBP-228ENST00000590347 ACIN1Q9UKV3 1341 aaKnown RBP24.03■■□□□ 1.44
CIRBP-228ENST00000590347 DCAF1Q9Y4B6 1507 aa23.85■■□□□ 1.41
CIRBP-228ENST00000590347 EHMT2Q96KQ7 1210 aa23.84■■□□□ 1.41
CIRBP-228ENST00000590347 ZEB1P37275 1124 aaPredicted RBP23.83■■□□□ 1.4
CIRBP-228ENST00000590347 ABCC9O60706 1549 aa23.81■■□□□ 1.4
CIRBP-228ENST00000590347 YTHDC1Q96MU7 727 aaKnown RBP23.65■■□□□ 1.38
CIRBP-228ENST00000590347 CENPBP07199 599 aaPredicted RBP23.59■■□□□ 1.37
CIRBP-228ENST00000590347 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.55■■□□□ 1.36
CIRBP-228ENST00000590347 FAM9AQ8IZU1 332 aaPredicted RBP23.5■■□□□ 1.35
CIRBP-228ENST00000590347 DIEXFQ68CQ4 756 aaKnown RBP23.48■■□□□ 1.35
CIRBP-228ENST00000590347 SCRIBQ14160 1630 aa23.48■■□□□ 1.35
CIRBP-228ENST00000590347 CCER1Q8TC90 406 aaPredicted RBP23.37■■□□□ 1.33
CIRBP-228ENST00000590347 BCL11AQ9H165 835 aa23.33■■□□□ 1.32
CIRBP-228ENST00000590347 TTBK1Q5TCY1 1321 aaPredicted RBP23.27■■□□□ 1.32
CIRBP-228ENST00000590347 RSF1Q96T23 1441 aaPredicted RBP23■■□□□ 1.27
CIRBP-228ENST00000590347 NACADO15069 1562 aa22.99■■□□□ 1.27
CIRBP-228ENST00000590347 CECR2Q9BXF3 1484 aa22.97■■□□□ 1.27
CIRBP-228ENST00000590347 MIER1Q8N108 512 aa22.95■■□□□ 1.26
CIRBP-228ENST00000590347 PABPN1Q86U42 306 aaKnown RBP eCLIP22.92■■□□□ 1.261e-14■■□□□ 14.3
CIRBP-228ENST00000590347 TRIM41Q8WV44 630 aa22.92■■□□□ 1.26
CIRBP-228ENST00000590347 CSRNP3Q8WYN3 585 aa22.91■■□□□ 1.26
CIRBP-228ENST00000590347 ANP32EQ9BTT0 268 aa22.86■■□□□ 1.25
CIRBP-228ENST00000590347 RB1CC1Q8TDY2 1594 aa22.78■■□□□ 1.24
CIRBP-228ENST00000590347 ZNF316A6NFI3 1004 aaPredicted RBP22.77■■□□□ 1.24
CIRBP-228ENST00000590347 MROH2BQ7Z745 1585 aa22.74■■□□□ 1.23
CIRBP-228ENST00000590347 TSHZ2Q9NRE2 1034 aa22.71■■□□□ 1.23
CIRBP-228ENST00000590347 PRKCSHP14314 528 aaPredicted RBP22.68■■□□□ 1.22
CIRBP-228ENST00000590347 SUPT16HQ9Y5B9 1047 aaKnown RBP22.66■■□□□ 1.22
CIRBP-228ENST00000590347 BCANQ96GW7 911 aa22.63■■□□□ 1.21
CIRBP-228ENST00000590347 WIZO95785 1651 aa22.56■■□□□ 1.2
CIRBP-228ENST00000590347 UNC13AQ9UPW8 1703 aa22.34■■□□□ 1.17
CIRBP-228ENST00000590347 HNRNPUL2Q1KMD3 747 aaKnown RBP22.34■■□□□ 1.17
CIRBP-228ENST00000590347 BAZ1AQ9NRL2 1556 aaPredicted RBP22.33■■□□□ 1.16
CIRBP-228ENST00000590347 ITGAEP38570 1179 aa22.22■■□□□ 1.15
CIRBP-228ENST00000590347 BICRAQ9NZM4 1560 aa22.21■■□□□ 1.15
CIRBP-228ENST00000590347 SMARCA4P51532 1647 aa22.19■■□□□ 1.14
CIRBP-228ENST00000590347 KCNH8Q96L42 1107 aa22.18■■□□□ 1.14
CIRBP-228ENST00000590347 FKBP8Q14318 412 aa22.14■■□□□ 1.14
CIRBP-228ENST00000590347 RBM19Q9Y4C8 960 aaKnown RBP22.14■■□□□ 1.13
CIRBP-228ENST00000590347 CCDC88BA6NC98 1476 aa22.14■■□□□ 1.13
CIRBP-228ENST00000590347 MSH5O43196 834 aa22.06■■□□□ 1.12
CIRBP-228ENST00000590347 ABCC8Q09428 1581 aa22.06■■□□□ 1.12
CIRBP-228ENST00000590347 ANO8Q9HCE9 1232 aaPredicted RBP22.04■■□□□ 1.12
CIRBP-228ENST00000590347 TOP2AP11388 1531 aaKnown RBP22.03■■□□□ 1.12
CIRBP-228ENST00000590347 SMARCA2P51531 1590 aa21.96■■□□□ 1.11
CIRBP-228ENST00000590347 ERICH6Q7L0X2 663 aa21.92■■□□□ 1.1
CIRBP-228ENST00000590347 CLSPNQ9HAW4 1339 aa21.89■■□□□ 1.1
CIRBP-228ENST00000590347 CCDC136Q96JN2 1154 aa21.87■■□□□ 1.09
CIRBP-228ENST00000590347 UBTFP17480 764 aaKnown RBP21.85■■□□□ 1.09
CIRBP-228ENST00000590347 ATAD2BQ9ULI0 1458 aa21.84■■□□□ 1.09
CIRBP-228ENST00000590347 RANGAP1P46060 587 aaPredicted RBP21.84■■□□□ 1.09
CIRBP-228ENST00000590347 SOGA1O94964 1423 aa21.82■■□□□ 1.08
CIRBP-228ENST00000590347 BAZ1BQ9UIG0 1483 aaKnown RBP21.81■■□□□ 1.08
CIRBP-228ENST00000590347 TRIM52Q96A61 297 aa21.78■■□□□ 1.08
CIRBP-228ENST00000590347 EIF4G1Q04637 1599 aaKnown RBP21.78■■□□□ 1.08
CIRBP-228ENST00000590347 DEKP35659 375 aaKnown RBP21.78■■□□□ 1.08
CIRBP-228ENST00000590347 IRX6P78412 446 aaPredicted RBP21.78■■□□□ 1.08
CIRBP-228ENST00000590347 CEP162Q5TB80 1403 aa21.76■■□□□ 1.07
CIRBP-228ENST00000590347 RUSC2Q8N2Y8 1516 aa21.76■■□□□ 1.07
CIRBP-228ENST00000590347 NEFLP07196 543 aa21.75■■□□□ 1.07
CIRBP-228ENST00000590347 SALL2Q9Y467 1007 aaPredicted RBP21.75■■□□□ 1.07
CIRBP-228ENST00000590347 NBR1Q14596 966 aa21.71■■□□□ 1.07
CIRBP-228ENST00000590347 RTN4Q9NQC3 1192 aaKnown RBP21.69■■□□□ 1.06
CIRBP-228ENST00000590347 WRNQ14191 1432 aaPredicted RBP eCLIP21.65■■□□□ 1.061e-6■■■■■ 58.5
CIRBP-228ENST00000590347 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.64■■□□□ 1.05
CIRBP-228ENST00000590347 DDX10Q13206 875 aaKnown RBP21.59■■□□□ 1.05
CIRBP-228ENST00000590347 HIRIP3Q9BW71 556 aaPredicted RBP21.59■■□□□ 1.05
CIRBP-228ENST00000590347 PEG3Q9GZU2 1588 aa21.58■■□□□ 1.05
CIRBP-228ENST00000590347 SYNJ1O43426 1573 aa21.48■■□□□ 1.03
CIRBP-228ENST00000590347 IL27Q8NEV9 243 aa21.47■■□□□ 1.03
CIRBP-228ENST00000590347 CDK11AQ9UQ88 783 aaPredicted RBP21.46■■□□□ 1.03
CIRBP-228ENST00000590347 APLP2Q06481 763 aa21.43■■□□□ 1.02
CIRBP-228ENST00000590347 FANCIQ9NVI1 1328 aa21.39■■□□□ 1.02
CIRBP-228ENST00000590347 NCAPD3P42695 1498 aa21.39■■□□□ 1.01
CIRBP-228ENST00000590347 PAK3O75914 559 aaPredicted RBP21.38■■□□□ 1.01
CIRBP-228ENST00000590347 DHX57Q6P158 1386 aaKnown RBP21.37■■□□□ 1.01
CIRBP-228ENST00000590347 TNIKQ9UKE5 1360 aa21.35■■□□□ 1.01
CIRBP-228ENST00000590347 DNAJC5BQ9UF47 199 aa21.29■■□□□ 1
CIRBP-228ENST00000590347 EEA1Q15075 1411 aa21.26■□□□□ 0.99
CIRBP-228ENST00000590347 GOLGA3Q08378 1498 aa21.26■□□□□ 0.99
CIRBP-228ENST00000590347 B4GALNT3Q6L9W6 998 aa21.25■□□□□ 0.99
CIRBP-228ENST00000590347 RAPGEF2Q9Y4G8 1499 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms