RNA–Protein interactions for RNA: ENST00000587169.5

CIRBP-212, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-212ENST00000587169 NISCHQ9Y2I1 1504 aa33.8■■■■□ 3
CIRBP-212ENST00000587169 SHROOM4Q9ULL8 1493 aa29.6■■■□□ 2.33
CIRBP-212ENST00000587169 DCAF8L2P0C7V8 631 aa29.2■■■□□ 2.26
CIRBP-212ENST00000587169 SUPT5HO00267 1087 aaKnown RBP29.19■■■□□ 2.26
CIRBP-212ENST00000587169 ZCCHC6Q5VYS8 1495 aaKnown RBP28.61■■■□□ 2.17
CIRBP-212ENST00000587169 CHIC1Q5VXU3 224 aa28.35■■■□□ 2.13
CIRBP-212ENST00000587169 MYO15BQ96JP2 1530 aa28.34■■■□□ 2.13
CIRBP-212ENST00000587169 CCDC180Q9P1Z9 1646 aa28.27■■■□□ 2.12
CIRBP-212ENST00000587169 HRCP23327 699 aa28.02■■■□□ 2.08
CIRBP-212ENST00000587169 PCGF6Q9BYE7 350 aa27.98■■■□□ 2.07
CIRBP-212ENST00000587169 LOC105371045A0A1W2PR82 267 aa27.74■■■□□ 2.03
CIRBP-212ENST00000587169 PPARGC1BQ86YN6 1023 aaKnown RBP27.69■■■□□ 2.02
CIRBP-212ENST00000587169 DCAF1Q9Y4B6 1507 aa27.47■■□□□ 1.99
CIRBP-212ENST00000587169 ABCC9O60706 1549 aa27.27■■□□□ 1.96
CIRBP-212ENST00000587169 EHMT2Q96KQ7 1210 aa27.19■■□□□ 1.94
CIRBP-212ENST00000587169 TRIM26Q12899 539 aaPredicted RBP27.13■■□□□ 1.93
CIRBP-212ENST00000587169 SCRIBQ14160 1630 aa27.05■■□□□ 1.92
CIRBP-212ENST00000587169 FAM9AQ8IZU1 332 aaPredicted RBP27.04■■□□□ 1.92
CIRBP-212ENST00000587169 RSF1Q96T23 1441 aaPredicted RBP27.01■■□□□ 1.91
CIRBP-212ENST00000587169 TRIM41Q8WV44 630 aa26.98■■□□□ 1.91
CIRBP-212ENST00000587169 RB1CC1Q8TDY2 1594 aa26.77■■□□□ 1.88
CIRBP-212ENST00000587169 CECR2Q9BXF3 1484 aa26.57■■□□□ 1.84
CIRBP-212ENST00000587169 ZEB1P37275 1124 aaPredicted RBP26.53■■□□□ 1.84
CIRBP-212ENST00000587169 MROH2BQ7Z745 1585 aa26.43■■□□□ 1.82
CIRBP-212ENST00000587169 PABPN1Q86U42 306 aaKnown RBP eCLIP26.43■■□□□ 1.821e-14■■□□□ 14.3
CIRBP-212ENST00000587169 WIZO95785 1651 aa26.28■■□□□ 1.8
CIRBP-212ENST00000587169 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.23■■□□□ 1.79
CIRBP-212ENST00000587169 NACADO15069 1562 aa26.19■■□□□ 1.78
CIRBP-212ENST00000587169 TTBK1Q5TCY1 1321 aaPredicted RBP26.17■■□□□ 1.78
CIRBP-212ENST00000587169 SCAF1Q9H7N4 1312 aaKnown RBP26.15■■□□□ 1.78
CIRBP-212ENST00000587169 CCER1Q8TC90 406 aaPredicted RBP26.07■■□□□ 1.76
CIRBP-212ENST00000587169 BAZ1AQ9NRL2 1556 aaPredicted RBP25.95■■□□□ 1.74
CIRBP-212ENST00000587169 ABCC8Q09428 1581 aa25.93■■□□□ 1.74
CIRBP-212ENST00000587169 CCDC88BA6NC98 1476 aa25.9■■□□□ 1.74
CIRBP-212ENST00000587169 EIF4G1Q04637 1599 aaKnown RBP25.88■■□□□ 1.73
CIRBP-212ENST00000587169 SOGA1O94964 1423 aa25.8■■□□□ 1.72
CIRBP-212ENST00000587169 CEP162Q5TB80 1403 aa25.74■■□□□ 1.71
CIRBP-212ENST00000587169 NEUROD1Q13562 356 aa25.74■■□□□ 1.71
CIRBP-212ENST00000587169 UBTFP17480 764 aaKnown RBP25.72■■□□□ 1.71
CIRBP-212ENST00000587169 TOP2AP11388 1531 aaKnown RBP25.71■■□□□ 1.71
CIRBP-212ENST00000587169 DIEXFQ68CQ4 756 aaKnown RBP25.71■■□□□ 1.71
CIRBP-212ENST00000587169 RUSC2Q8N2Y8 1516 aa25.69■■□□□ 1.7
CIRBP-212ENST00000587169 ACIN1Q9UKV3 1341 aaKnown RBP25.68■■□□□ 1.7
CIRBP-212ENST00000587169 RANGAP1P46060 587 aaPredicted RBP25.68■■□□□ 1.7
CIRBP-212ENST00000587169 SMARCA2P51531 1590 aa25.65■■□□□ 1.7
CIRBP-212ENST00000587169 CSRNP3Q8WYN3 585 aa25.64■■□□□ 1.7
CIRBP-212ENST00000587169 SMARCA4P51532 1647 aa25.63■■□□□ 1.69
CIRBP-212ENST00000587169 WRNQ14191 1432 aaPredicted RBP eCLIP25.62■■□□□ 1.691e-6■■■■■ 58.5
CIRBP-212ENST00000587169 PELP1Q8IZL8 1130 aaKnown RBP25.62■■□□□ 1.69
CIRBP-212ENST00000587169 TNIKQ9UKE5 1360 aa25.58■■□□□ 1.69
CIRBP-212ENST00000587169 UNC13AQ9UPW8 1703 aa25.53■■□□□ 1.68
CIRBP-212ENST00000587169 GTF3C3Q9Y5Q9 886 aa25.5■■□□□ 1.67
CIRBP-212ENST00000587169 HNRNPUL2Q1KMD3 747 aaKnown RBP25.45■■□□□ 1.66
CIRBP-212ENST00000587169 CENPBP07199 599 aaPredicted RBP25.4■■□□□ 1.66
CIRBP-212ENST00000587169 ZNF316A6NFI3 1004 aaPredicted RBP25.37■■□□□ 1.65
CIRBP-212ENST00000587169 EEA1Q15075 1411 aa25.37■■□□□ 1.65
CIRBP-212ENST00000587169 GOLGA3Q08378 1498 aa25.35■■□□□ 1.65
CIRBP-212ENST00000587169 YTHDC1Q96MU7 727 aaKnown RBP25.34■■□□□ 1.65
CIRBP-212ENST00000587169 BICRAQ9NZM4 1560 aa25.29■■□□□ 1.64
CIRBP-212ENST00000587169 CLIP1P30622 1438 aa25.19■■□□□ 1.62
CIRBP-212ENST00000587169 MIER1Q8N108 512 aa25.19■■□□□ 1.62
CIRBP-212ENST00000587169 SYNJ1O43426 1573 aa25.19■■□□□ 1.62
CIRBP-212ENST00000587169 CEP164Q9UPV0 1460 aa25.15■■□□□ 1.62
CIRBP-212ENST00000587169 APLP2Q06481 763 aa25.12■■□□□ 1.61
CIRBP-212ENST00000587169 RAPGEF2Q9Y4G8 1499 aa25.09■■□□□ 1.61
CIRBP-212ENST00000587169 VPS8Q8N3P4 1428 aa25.05■■□□□ 1.6
CIRBP-212ENST00000587169 KIF21BO75037 1637 aa25■■□□□ 1.59
CIRBP-212ENST00000587169 ATAD2BQ9ULI0 1458 aa24.99■■□□□ 1.59
CIRBP-212ENST00000587169 PEG3Q9GZU2 1588 aa24.97■■□□□ 1.59
CIRBP-212ENST00000587169 BAZ1BQ9UIG0 1483 aaKnown RBP24.95■■□□□ 1.58
CIRBP-212ENST00000587169 KANK4Q5T7N3 995 aaPredicted RBP24.86■■□□□ 1.57
CIRBP-212ENST00000587169 DHX57Q6P158 1386 aaKnown RBP24.74■■□□□ 1.55
CIRBP-212ENST00000587169 ITGAEP38570 1179 aa24.71■■□□□ 1.55
CIRBP-212ENST00000587169 TOP2BQ02880 1626 aa24.71■■□□□ 1.55
CIRBP-212ENST00000587169 ARAP1Q96P48 1450 aa24.7■■□□□ 1.54
CIRBP-212ENST00000587169 PRXQ9BXM0 1461 aa24.65■■□□□ 1.54
CIRBP-212ENST00000587169 DNAJC5BQ9UF47 199 aa24.56■■□□□ 1.52
CIRBP-212ENST00000587169 CLSPNQ9HAW4 1339 aa24.55■■□□□ 1.52
CIRBP-212ENST00000587169 CUX1P39880 1505 aa24.54■■□□□ 1.52
CIRBP-212ENST00000587169 ERICH3Q5RHP9 1530 aa24.54■■□□□ 1.52
CIRBP-212ENST00000587169 BIVM-ERCC5R4GMW8 1640 aa24.54■■□□□ 1.52
CIRBP-212ENST00000587169 P3H3Q8IVL6 736 aa24.52■■□□□ 1.52
CIRBP-212ENST00000587169 KIF27Q86VH2 1401 aa24.49■■□□□ 1.51
CIRBP-212ENST00000587169 ATP1B4Q9UN42 357 aaPredicted RBP24.49■■□□□ 1.51
CIRBP-212ENST00000587169 RRBP1Q9P2E9 1410 aaKnown RBP24.47■■□□□ 1.51
CIRBP-212ENST00000587169 CCNB3Q8WWL7 1395 aa24.47■■□□□ 1.51
CIRBP-212ENST00000587169 ARHGAP35Q9NRY4 1499 aa24.44■■□□□ 1.5
CIRBP-212ENST00000587169 KCNH8Q96L42 1107 aa24.44■■□□□ 1.5
CIRBP-212ENST00000587169 SUPT16HQ9Y5B9 1047 aaKnown RBP24.42■■□□□ 1.5
CIRBP-212ENST00000587169 RAB3GAP2Q9H2M9 1393 aa24.35■■□□□ 1.49
CIRBP-212ENST00000587169 NCAPD3P42695 1498 aa24.35■■□□□ 1.49
CIRBP-212ENST00000587169 SIN3AQ96ST3 1273 aa24.3■■□□□ 1.48
CIRBP-212ENST00000587169 CFTRP13569 1480 aa24.29■■□□□ 1.48
CIRBP-212ENST00000587169 IGF1RP08069 1367 aa24.29■■□□□ 1.48
CIRBP-212ENST00000587169 CUX2O14529 1486 aa24.29■■□□□ 1.48
CIRBP-212ENST00000587169 FAM50AQ14320 339 aaKnown RBP24.29■■□□□ 1.48
CIRBP-212ENST00000587169 MYT1Q01538 1121 aa24.27■■□□□ 1.48
CIRBP-212ENST00000587169 HMGXB3Q12766 1538 aa24.25■■□□□ 1.47
CIRBP-212ENST00000587169 HIRIP3Q9BW71 556 aaPredicted RBP24.23■■□□□ 1.47
CIRBP-212ENST00000587169 DDX10Q13206 875 aaKnown RBP24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms