Protein–RNA interactions for Protein: Q86U42

PABPN1, Polyadenylate-binding protein 2, humanhuman

Known RBP eCLIP

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1Q86U42 PLXNB1-203ENST00000449094 3863 ntTSL 219.71■□□□□ 0.751e-9■□□□□ 10.5
PABPN1Q86U42 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.451e-9■□□□□ 10.5
PABPN1Q86U42 CTNNB1-203ENST00000396185 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.441e-9■□□□□ 10.5
PABPN1Q86U42 ATP5B-208ENST00000551182 457 ntTSL 213.16□□□□□ -0.31e-9■□□□□ 10.5
PABPN1Q86U42 ATP5B-204ENST00000548474 449 ntTSL 312.59□□□□□ -0.391e-9■□□□□ 10.5
PABPN1Q86U42 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.672e-6■□□□□ 10.4
PABPN1Q86U42 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC44.16■■■■■ 4.663e-11■□□□□ 10.4
PABPN1Q86U42 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC42.9■■■■■ 4.463e-11■□□□□ 10.4
PABPN1Q86U42 MTCH1-205ENST00000471737 629 ntTSL 225.33■■□□□ 1.653e-11■□□□□ 10.4
PABPN1Q86U42 PPP1R35-205ENST00000491407 942 ntTSL 557.49■■■■■ 6.797e-6■□□□□ 10.4
PABPN1Q86U42 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC55.57■■■■■ 6.497e-6■□□□□ 10.4
PABPN1Q86U42 PPP1R35-204ENST00000487452 965 ntTSL 254.38■■■■■ 6.37e-6■□□□□ 10.4
PABPN1Q86U42 PPP1R35-203ENST00000476185 474 ntTSL 240.92■■■■■ 4.147e-6■□□□□ 10.4
PABPN1Q86U42 PPP1R35-202ENST00000470295 758 ntTSL 240.22■■■■■ 4.037e-6■□□□□ 10.4
PABPN1Q86U42 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC46.49■■■■■ 5.035e-7■□□□□ 10.4
PABPN1Q86U42 TMC6-222ENST00000592076 693 ntTSL 332.44■■■□□ 2.785e-7■□□□□ 10.4
PABPN1Q86U42 CTSA-210ENST00000606000 644 ntTSL 324.98■■□□□ 1.597e-8■□□□□ 10.4
PABPN1Q86U42 MED24-230ENST00000584077 552 ntTSL 330.58■■■□□ 2.495e-6■□□□□ 10.4
PABPN1Q86U42 RPL13-203ENST00000399461 879 ntTSL 244.57■■■■■ 4.732e-10■□□□□ 10.4
PABPN1Q86U42 RPL13-209ENST00000491523 698 ntTSL 344.57■■■■■ 4.732e-10■□□□□ 10.4
PABPN1Q86U42 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC36.48■■■■□ 3.432e-10■□□□□ 10.4
PABPN1Q86U42 RPL13-212ENST00000563749 2367 nt35.3■■■■□ 3.242e-10■□□□□ 10.4
PABPN1Q86U42 RPL13-205ENST00000467736 528 ntTSL 333.96■■■■□ 3.032e-10■□□□□ 10.4
PABPN1Q86U42 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC32.64■■■□□ 2.822e-10■□□□□ 10.4
PABPN1Q86U42 RPL13-210ENST00000562879 958 ntTSL 1 (best)30.68■■■□□ 2.52e-10■□□□□ 10.4
PABPN1Q86U42 RPL13-211ENST00000563270 554 ntTSL 429.89■■■□□ 2.382e-10■□□□□ 10.4
PABPN1Q86U42 RPL13-213ENST00000565571 568 ntTSL 229.89■■■□□ 2.382e-10■□□□□ 10.4
PABPN1Q86U42 RPL13-207ENST00000484610 924 ntTSL 529.54■■■□□ 2.322e-10■□□□□ 10.4
PABPN1Q86U42 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC27.1■■□□□ 1.932e-10■□□□□ 10.4
PABPN1Q86U42 RPL13-201ENST00000311528 4498 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.792e-10■□□□□ 10.4
PABPN1Q86U42 CHKB-CPT1B-201ENST00000452668 546 ntTSL 424.68■■□□□ 1.541e-6■□□□□ 10.4
PABPN1Q86U42 CHKB-203ENST00000464225 624 ntTSL 220.71■□□□□ 0.911e-6■□□□□ 10.4
PABPN1Q86U42 CARD10-205ENST00000437756 2140 ntTSL 1 (best)34.29■■■■□ 3.084e-7■□□□□ 10.4
PABPN1Q86U42 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.278e-8■□□□□ 10.4
PABPN1Q86U42 SOAT2-202ENST00000542365 1797 ntTSL 233.66■■■□□ 2.988e-8■□□□□ 10.4
PABPN1Q86U42 AMPD2-207ENST00000467071 556 ntTSL 225.84■■□□□ 1.732e-6■□□□□ 10.4
PABPN1Q86U42 GGA1-210ENST00000429218 566 ntTSL 531.83■■■□□ 2.692e-10■□□□□ 10.4
PABPN1Q86U42 GGA1-208ENST00000413251 565 ntTSL 514.84□□□□□ -0.032e-10■□□□□ 10.4
PABPN1Q86U42 GGA1-209ENST00000423024 559 ntTSL 314.84□□□□□ -0.032e-10■□□□□ 10.4
PABPN1Q86U42 RAB17-203ENST00000409576 466 ntTSL 3 BASIC34.77■■■■□ 3.162e-11■□□□□ 10.4
PABPN1Q86U42 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.492e-11■□□□□ 10.4
PABPN1Q86U42 RAB17-206ENST00000414278 1511 ntTSL 229.29■■■□□ 2.282e-11■□□□□ 10.4
PABPN1Q86U42 RAB17-202ENST00000392001 1792 ntTSL 1 (best)28.1■■■□□ 2.092e-11■□□□□ 10.4
PABPN1Q86U42 RAB17-210ENST00000477149 3211 ntTSL 1 (best)20.81■□□□□ 0.922e-11■□□□□ 10.4
PABPN1Q86U42 AKT2-239ENST00000583859 567 ntTSL 551.31■■■■■ 5.87e-7■□□□□ 10.4
PABPN1Q86U42 PKM-203ENST00000389093 2279 ntTSL 5 BASIC41.49■■■■■ 4.233e-11■□□□□ 10.4
PABPN1Q86U42 PLXNA3-206ENST00000491066 604 ntTSL 239.93■■■■□ 3.987e-7■□□□□ 10.4
PABPN1Q86U42 PKM-204ENST00000449901 2526 ntTSL 2 BASIC37.84■■■■□ 3.653e-11■□□□□ 10.4
PABPN1Q86U42 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC36.79■■■■□ 3.483e-11■□□□□ 10.4
PABPN1Q86U42 ANAPC2-205ENST00000487917 1972 ntTSL 234.69■■■■□ 3.147e-7■□□□□ 10.4
PABPN1Q86U42 TTC38-205ENST00000451998 582 ntTSL 232.17■■■□□ 2.747e-7■□□□□ 10.4
PABPN1Q86U42 MYO19-208ENST00000611794 854 ntTSL 331.71■■■□□ 2.677e-7■□□□□ 10.4
PABPN1Q86U42 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.157e-7■□□□□ 10.4
PABPN1Q86U42 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC28.41■■■□□ 2.143e-11■□□□□ 10.4
PABPN1Q86U42 TNPO2-213ENST00000589149 564 ntTSL 527.81■■■□□ 2.047e-7■□□□□ 10.4
PABPN1Q86U42 CLK3-213ENST00000563842 860 ntTSL 526.56■■□□□ 1.847e-7■□□□□ 10.4
PABPN1Q86U42 CLK3-218ENST00000566926 646 ntTSL 526.56■■□□□ 1.847e-7■□□□□ 10.4
PABPN1Q86U42 DGCR8-205ENST00000475941 2669 ntTSL 226.48■■□□□ 1.837e-7■□□□□ 10.4
PABPN1Q86U42 IL17RB-203ENST00000494338 1048 ntTSL 524.58■■□□□ 1.531e-6■□□□□ 10.4
PABPN1Q86U42 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.487e-7■□□□□ 10.4
PABPN1Q86U42 PELP1-215ENST00000575534 601 ntTSL 321.9■■□□□ 1.17e-7■□□□□ 10.4
PABPN1Q86U42 MYO19-212ENST00000614416 548 ntTSL 221.49■■□□□ 1.037e-7■□□□□ 10.4
PABPN1Q86U42 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.017e-7■□□□□ 10.4
PABPN1Q86U42 DGCR8-202ENST00000383024 4419 ntTSL 5 BASIC20.5■□□□□ 0.877e-7■□□□□ 10.4
PABPN1Q86U42 PKM-219ENST00000567118 2254 ntTSL 220.38■□□□□ 0.853e-11■□□□□ 10.4
PABPN1Q86U42 DGCR8-209ENST00000495826 4695 ntTSL 1 (best)20.34■□□□□ 0.857e-7■□□□□ 10.4
PABPN1Q86U42 PKM-214ENST00000565143 2301 ntTSL 1 (best)19.98■□□□□ 0.793e-11■□□□□ 10.4
PABPN1Q86U42 PKM-222ENST00000568883 1863 ntTSL 5 BASIC19.8■□□□□ 0.763e-11■□□□□ 10.4
PABPN1Q86U42 PLXNA3-207ENST00000493546 793 ntTSL 319.3■□□□□ 0.687e-7■□□□□ 10.4
PABPN1Q86U42 CLK3-208ENST00000562626 812 ntTSL 219.04■□□□□ 0.647e-7■□□□□ 10.4
PABPN1Q86U42 PKM-202ENST00000335181 2318 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.573e-11■□□□□ 10.4
PABPN1Q86U42 DGCR8-203ENST00000407755 4129 ntTSL 1 (best) BASIC18.32■□□□□ 0.527e-7■□□□□ 10.4
PABPN1Q86U42 DGCR8-210ENST00000498171 3661 ntTSL 1 (best)16.99■□□□□ 0.317e-7■□□□□ 10.4
PABPN1Q86U42 PKM-212ENST00000564440 3016 ntTSL 1 (best)16.45■□□□□ 0.223e-11■□□□□ 10.4
PABPN1Q86U42 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.797e-7■□□□□ 10.4
PABPN1Q86U42 CLK3-219ENST00000567805 327 ntTSL 39.73□□□□□ -0.857e-7■□□□□ 10.4
PABPN1Q86U42 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.087e-7■□□□□ 10.4
PABPN1Q86U42 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.157e-7■□□□□ 10.4
PABPN1Q86U42 RNU6-32P-201ENST00000383948 107 ntBASIC7.59□□□□□ -1.197e-7■□□□□ 10.4
PABPN1Q86U42 SMG1-211ENST00000565324 12465 ntTSL 1 (best)6.25□□□□□ -1.417e-7■□□□□ 10.4
PABPN1Q86U42 ELP1-204ENST00000537196 3823 ntTSL 1 (best) BASIC19.94■□□□□ 0.789e-7■□□□□ 10.4
PABPN1Q86U42 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.719e-7■□□□□ 10.4
PABPN1Q86U42 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.196e-7■□□□□ 10.4
PABPN1Q86U42 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC28.42■■■□□ 2.146e-7■□□□□ 10.4
PABPN1Q86U42 RBM39-212ENST00000429968 2149 ntTSL 223.08■■□□□ 1.281e-8■□□□□ 10.4
PABPN1Q86U42 RBM39-216ENST00000444878 2124 ntTSL 222.87■■□□□ 1.251e-8■□□□□ 10.4
PABPN1Q86U42 RBM39-230ENST00000476806 754 ntTSL 514.07□□□□□ -0.161e-8■□□□□ 10.4
PABPN1Q86U42 RBM39-237ENST00000492779 2316 ntTSL 211.87□□□□□ -0.511e-8■□□□□ 10.4
PABPN1Q86U42 RBM39-225ENST00000465158 825 ntTSL 212.23□□□□□ -0.452e-8■□□□□ 10.4
PABPN1Q86U42 ATP5D-204ENST00000589478 640 ntTSL 239.24■■■■□ 3.875e-7■□□□□ 10.4
PABPN1Q86U42 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC39.2■■■■□ 3.875e-7■□□□□ 10.4
PABPN1Q86U42 ATP5D-203ENST00000588538 1393 ntTSL 1 (best)38.29■■■■□ 3.725e-7■□□□□ 10.4
PABPN1Q86U42 ATP5D-205ENST00000590265 1144 ntTSL 1 (best)36.07■■■■□ 3.365e-7■□□□□ 10.4
PABPN1Q86U42 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC36.07■■■■□ 3.365e-7■□□□□ 10.4
PABPN1Q86U42 ATP5D-206ENST00000591249 405 ntTSL 533.32■■■□□ 2.925e-7■□□□□ 10.4
PABPN1Q86U42 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.495e-7■□□□□ 10.4
PABPN1Q86U42 ATP5D-209ENST00000614837 343 ntTSL 230.58■■■□□ 2.495e-7■□□□□ 10.4
PABPN1Q86U42 SF3B1-209ENST00000479532 587 ntTSL 213.17□□□□□ -0.31e-6■□□□□ 10.4
PABPN1Q86U42 FKBP10-207ENST00000490938 837 ntTSL 231.88■■■□□ 2.694e-8■□□□□ 10.3
PABPN1Q86U42 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC30.03■■■□□ 2.49e-7■□□□□ 10.3
Retrieved 100 of 8,254 protein–RNA pairs in 50.7 ms