RNA–Protein interactions for RNA: ENST00000449901.6

PKM-204, Transcript of pyruvate kinase M1/2, humanhuman

TSL 2 BASIC

Gene PKM, Length 2,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-204ENST00000449901 NISCHQ9Y2I1 1504 aa48.82■■■■■ 5.41
PKM-204ENST00000449901 CCDC180Q9P1Z9 1646 aa42.32■■■■■ 4.37
PKM-204ENST00000449901 ZCCHC6Q5VYS8 1495 aaKnown RBP41.06■■■■■ 4.16
PKM-204ENST00000449901 SHROOM4Q9ULL8 1493 aa40.42■■■■■ 4.06
PKM-204ENST00000449901 DCAF8L2P0C7V8 631 aa40.37■■■■■ 4.05
PKM-204ENST00000449901 DCAF1Q9Y4B6 1507 aa40.25■■■■■ 4.03
PKM-204ENST00000449901 SUPT5HO00267 1087 aaKnown RBP40.07■■■■■ 4
PKM-204ENST00000449901 ABCC9O60706 1549 aa39.99■■■■□ 3.99
PKM-204ENST00000449901 HRCP23327 699 aa39.83■■■■□ 3.97
PKM-204ENST00000449901 MYO15BQ96JP2 1530 aa39.64■■■■□ 3.94
PKM-204ENST00000449901 CHIC1Q5VXU3 224 aa39.38■■■■□ 3.89
PKM-204ENST00000449901 NACADO15069 1562 aa39.37■■■■□ 3.89
PKM-204ENST00000449901 PCGF6Q9BYE7 350 aa39.2■■■■□ 3.87
PKM-204ENST00000449901 SCRIBQ14160 1630 aa39.14■■■■□ 3.86
PKM-204ENST00000449901 PPARGC1BQ86YN6 1023 aaKnown RBP39.01■■■■□ 3.83
PKM-204ENST00000449901 RB1CC1Q8TDY2 1594 aa38.99■■■■□ 3.83
PKM-204ENST00000449901 LOC105371045A0A1W2PR82 267 aa38.38■■■■□ 3.73
PKM-204ENST00000449901 UNC13AQ9UPW8 1703 aa38.33■■■■□ 3.73
PKM-204ENST00000449901 TRIM26Q12899 539 aaPredicted RBP38.11■■■■□ 3.69
PKM-204ENST00000449901 RSF1Q96T23 1441 aaPredicted RBP38.02■■■■□ 3.68
PKM-204ENST00000449901 CECR2Q9BXF3 1484 aa38.02■■■■□ 3.68
PKM-204ENST00000449901 BICRAQ9NZM4 1560 aa37.94■■■■□ 3.66
PKM-204ENST00000449901 PABPN1Q86U42 306 aaKnown RBP eCLIP37.84■■■■□ 3.653e-11■□□□□ 10.4
PKM-204ENST00000449901 MROH2BQ7Z745 1585 aa37.8■■■■□ 3.64
PKM-204ENST00000449901 BAZ1AQ9NRL2 1556 aaPredicted RBP37.62■■■■□ 3.61
PKM-204ENST00000449901 ZEB1P37275 1124 aaPredicted RBP37.6■■■■□ 3.61
PKM-204ENST00000449901 PELP1Q8IZL8 1130 aaKnown RBP37.56■■■■□ 3.6
PKM-204ENST00000449901 WIZO95785 1651 aa37.51■■■■□ 3.6
PKM-204ENST00000449901 SMARCA4P51532 1647 aa37.47■■■■□ 3.59
PKM-204ENST00000449901 SCAF1Q9H7N4 1312 aaKnown RBP37.39■■■■□ 3.58
PKM-204ENST00000449901 TRIM41Q8WV44 630 aa37.14■■■■□ 3.54
PKM-204ENST00000449901 FAM9AQ8IZU1 332 aaPredicted RBP37.03■■■■□ 3.52
PKM-204ENST00000449901 TOP2AP11388 1531 aaKnown RBP37.02■■■■□ 3.52
PKM-204ENST00000449901 PEG3Q9GZU2 1588 aa36.94■■■■□ 3.5
PKM-204ENST00000449901 ATAD2BQ9ULI0 1458 aa36.8■■■■□ 3.48
PKM-204ENST00000449901 EHMT2Q96KQ7 1210 aa36.8■■■■□ 3.48
PKM-204ENST00000449901 SMARCA2P51531 1590 aa36.74■■■■□ 3.47
PKM-204ENST00000449901 CCDC88BA6NC98 1476 aa36.73■■■■□ 3.47
PKM-204ENST00000449901 EIF4G1Q04637 1599 aaKnown RBP36.73■■■■□ 3.47
PKM-204ENST00000449901 ACIN1Q9UKV3 1341 aaKnown RBP36.62■■■■□ 3.45
PKM-204ENST00000449901 BAZ1BQ9UIG0 1483 aaKnown RBP36.59■■■■□ 3.45
PKM-204ENST00000449901 NEUROD1Q13562 356 aa36.55■■■■□ 3.44
PKM-204ENST00000449901 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.52■■■■□ 3.44
PKM-204ENST00000449901 CCER1Q8TC90 406 aaPredicted RBP36.4■■■■□ 3.42
PKM-204ENST00000449901 NCAPD3P42695 1498 aa36.39■■■■□ 3.42
PKM-204ENST00000449901 HMGXB3Q12766 1538 aa36.33■■■■□ 3.41
PKM-204ENST00000449901 GTF3C3Q9Y5Q9 886 aa36.27■■■■□ 3.4
PKM-204ENST00000449901 DIEXFQ68CQ4 756 aaKnown RBP36.25■■■■□ 3.39
PKM-204ENST00000449901 CC2D2AQ9P2K1 1620 aa36.14■■■■□ 3.38
PKM-204ENST00000449901 CENPBP07199 599 aaPredicted RBP36.14■■■■□ 3.38
PKM-204ENST00000449901 ABCC8Q09428 1581 aa36.11■■■■□ 3.37
PKM-204ENST00000449901 MYT1Q01538 1121 aa35.91■■■■□ 3.34
PKM-204ENST00000449901 TTBK1Q5TCY1 1321 aaPredicted RBP35.84■■■■□ 3.33
PKM-204ENST00000449901 WRNQ14191 1432 aaPredicted RBP eCLIP35.84■■■■□ 3.331e-7■■■■□ 20.9
PKM-204ENST00000449901 ZNF316A6NFI3 1004 aaPredicted RBP35.7■■■■□ 3.3
PKM-204ENST00000449901 CFTRP13569 1480 aa35.69■■■■□ 3.3
PKM-204ENST00000449901 CEP162Q5TB80 1403 aa35.68■■■■□ 3.3
PKM-204ENST00000449901 SYNJ1O43426 1573 aa35.64■■■■□ 3.3
PKM-204ENST00000449901 YTHDC1Q96MU7 727 aaKnown RBP35.53■■■■□ 3.28
PKM-204ENST00000449901 TNIKQ9UKE5 1360 aa35.51■■■■□ 3.27
PKM-204ENST00000449901 CADPSQ9ULU8 1353 aa35.51■■■■□ 3.27
PKM-204ENST00000449901 SOGA1O94964 1423 aa35.49■■■■□ 3.27
PKM-204ENST00000449901 PRDM2Q13029 1718 aa35.44■■■■□ 3.26
PKM-204ENST00000449901 TOP2BQ02880 1626 aa35.4■■■■□ 3.26
PKM-204ENST00000449901 MIER1Q8N108 512 aa35.4■■■■□ 3.26
PKM-204ENST00000449901 DNAJC5BQ9UF47 199 aa35.39■■■■□ 3.26
PKM-204ENST00000449901 RUSC2Q8N2Y8 1516 aa35.37■■■■□ 3.25
PKM-204ENST00000449901 BIVM-ERCC5R4GMW8 1640 aa35.34■■■■□ 3.25
PKM-204ENST00000449901 CUX1P39880 1505 aa35.31■■■■□ 3.24
PKM-204ENST00000449901 CSRNP3Q8WYN3 585 aa35.27■■■■□ 3.24
PKM-204ENST00000449901 UBTFP17480 764 aaKnown RBP35.26■■■■□ 3.23
PKM-204ENST00000449901 EEA1Q15075 1411 aa35.25■■■■□ 3.23
PKM-204ENST00000449901 NESP48681 1621 aa35.23■■■■□ 3.23
PKM-204ENST00000449901 FANCD2Q9BXW9 1451 aa35.14■■■■□ 3.22
PKM-204ENST00000449901 HNRNPUL2Q1KMD3 747 aaKnown RBP35.13■■■■□ 3.21
PKM-204ENST00000449901 GOLGA3Q08378 1498 aa35.11■■■■□ 3.21
PKM-204ENST00000449901 LAMC3Q9Y6N6 1575 aa35.08■■■■□ 3.21
PKM-204ENST00000449901 FGD5Q6ZNL6 1462 aa34.86■■■■□ 3.17
PKM-204ENST00000449901 CEP164Q9UPV0 1460 aa34.85■■■■□ 3.17
PKM-204ENST00000449901 KIF21BO75037 1637 aa34.85■■■■□ 3.17
PKM-204ENST00000449901 DNMBPQ6XZF7 1577 aa34.83■■■■□ 3.17
PKM-204ENST00000449901 PDS5BQ9NTI5 1447 aa34.81■■■■□ 3.16
PKM-204ENST00000449901 CLIP1P30622 1438 aa34.79■■■■□ 3.16
PKM-204ENST00000449901 TOPBP1Q92547 1522 aa34.79■■■■□ 3.16
PKM-204ENST00000449901 KIF27Q86VH2 1401 aa34.77■■■■□ 3.16
PKM-204ENST00000449901 VPS8Q8N3P4 1428 aa34.74■■■■□ 3.15
PKM-204ENST00000449901 KIF21AQ7Z4S6 1674 aa34.74■■■■□ 3.15
PKM-204ENST00000449901 URB2Q14146 1524 aaKnown RBP34.72■■■■□ 3.15
PKM-204ENST00000449901 RAPGEF2Q9Y4G8 1499 aa34.72■■■■□ 3.15
PKM-204ENST00000449901 CUX2O14529 1486 aa34.69■■■■□ 3.14
PKM-204ENST00000449901 SUPT16HQ9Y5B9 1047 aaKnown RBP34.67■■■■□ 3.14
PKM-204ENST00000449901 POLA1P09884 1462 aaPredicted RBP34.66■■■■□ 3.14
PKM-204ENST00000449901 PRXQ9BXM0 1461 aa34.65■■■■□ 3.14
PKM-204ENST00000449901 RAD54L2Q9Y4B4 1467 aa34.61■■■■□ 3.13
PKM-204ENST00000449901 CLSPNQ9HAW4 1339 aa34.6■■■■□ 3.13
PKM-204ENST00000449901 APLP2Q06481 763 aa34.6■■■■□ 3.13
PKM-204ENST00000449901 ERICH3Q5RHP9 1530 aa34.55■■■■□ 3.12
PKM-204ENST00000449901 DHX57Q6P158 1386 aaKnown RBP34.53■■■■□ 3.12
PKM-204ENST00000449901 IGF1RP08069 1367 aa34.51■■■■□ 3.12
PKM-204ENST00000449901 ABCA10Q8WWZ4 1543 aa34.51■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms