RNA–Protein interactions for RNA: ENST00000392001.6

RAB17-202, Transcript of RAB17, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB17, Length 1,792 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB17-202ENST00000392001 NISCHQ9Y2I1 1504 aa35.79■■■■□ 3.32
RAB17-202ENST00000392001 CCDC180Q9P1Z9 1646 aa31.34■■■□□ 2.61
RAB17-202ENST00000392001 ABCC9O60706 1549 aa30.05■■■□□ 2.4
RAB17-202ENST00000392001 ZCCHC6Q5VYS8 1495 aaKnown RBP30■■■□□ 2.39
RAB17-202ENST00000392001 DCAF1Q9Y4B6 1507 aa29.64■■■□□ 2.34
RAB17-202ENST00000392001 DCAF8L2P0C7V8 631 aa29.54■■■□□ 2.32
RAB17-202ENST00000392001 MYO15BQ96JP2 1530 aa29.42■■■□□ 2.3
RAB17-202ENST00000392001 NACADO15069 1562 aa29.26■■■□□ 2.27
RAB17-202ENST00000392001 RB1CC1Q8TDY2 1594 aa29.05■■■□□ 2.24
RAB17-202ENST00000392001 SHROOM4Q9ULL8 1493 aa28.88■■■□□ 2.21
RAB17-202ENST00000392001 SCRIBQ14160 1630 aa28.7■■■□□ 2.18
RAB17-202ENST00000392001 UNC13AQ9UPW8 1703 aa28.43■■■□□ 2.14
RAB17-202ENST00000392001 BICRAQ9NZM4 1560 aa28.19■■■□□ 2.1
RAB17-202ENST00000392001 PABPN1Q86U42 306 aaKnown RBP eCLIP28.1■■■□□ 2.092e-11■□□□□ 10.4
RAB17-202ENST00000392001 CECR2Q9BXF3 1484 aa27.8■■■□□ 2.04
RAB17-202ENST00000392001 DNAJC5BQ9UF47 199 aa27.7■■■□□ 2.02
RAB17-202ENST00000392001 SUPT5HO00267 1087 aaKnown RBP27.68■■■□□ 2.02
RAB17-202ENST00000392001 RSF1Q96T23 1441 aaPredicted RBP27.66■■■□□ 2.02
RAB17-202ENST00000392001 BAZ1AQ9NRL2 1556 aaPredicted RBP27.64■■■□□ 2.02
RAB17-202ENST00000392001 MROH2BQ7Z745 1585 aa27.61■■■□□ 2.01
RAB17-202ENST00000392001 SMARCA4P51532 1647 aa27.55■■■□□ 2
RAB17-202ENST00000392001 WIZO95785 1651 aa27.35■■□□□ 1.97
RAB17-202ENST00000392001 EIF4G1Q04637 1599 aaKnown RBP27.34■■□□□ 1.97
RAB17-202ENST00000392001 PEG3Q9GZU2 1588 aa27.28■■□□□ 1.96
RAB17-202ENST00000392001 ATAD2BQ9ULI0 1458 aa27.18■■□□□ 1.94
RAB17-202ENST00000392001 SMARCA2P51531 1590 aa27.16■■□□□ 1.94
RAB17-202ENST00000392001 CC2D2AQ9P2K1 1620 aa27.15■■□□□ 1.94
RAB17-202ENST00000392001 TOP2AP11388 1531 aaKnown RBP27.09■■□□□ 1.93
RAB17-202ENST00000392001 NCAPD3P42695 1498 aa27.03■■□□□ 1.92
RAB17-202ENST00000392001 BAZ1BQ9UIG0 1483 aaKnown RBP26.98■■□□□ 1.91
RAB17-202ENST00000392001 HMGXB3Q12766 1538 aa26.94■■□□□ 1.9
RAB17-202ENST00000392001 CCDC88BA6NC98 1476 aa26.82■■□□□ 1.88
RAB17-202ENST00000392001 CHIC1Q5VXU3 224 aa26.42■■□□□ 1.82
RAB17-202ENST00000392001 CFTRP13569 1480 aa26.34■■□□□ 1.81
RAB17-202ENST00000392001 CADPSQ9ULU8 1353 aa26.3■■□□□ 1.8
RAB17-202ENST00000392001 PRDM2Q13029 1718 aa26.14■■□□□ 1.78
RAB17-202ENST00000392001 LAMC3Q9Y6N6 1575 aa26.12■■□□□ 1.77
RAB17-202ENST00000392001 ABCC8Q09428 1581 aa26.11■■□□□ 1.77
RAB17-202ENST00000392001 NESP48681 1621 aa26.09■■□□□ 1.77
RAB17-202ENST00000392001 TRIM41Q8WV44 630 aa26.09■■□□□ 1.77
RAB17-202ENST00000392001 WRNQ14191 1432 aaPredicted RBP eCLIP26.02■■□□□ 1.76
RAB17-202ENST00000392001 FANCD2Q9BXW9 1451 aa25.97■■□□□ 1.75
RAB17-202ENST00000392001 ERCC6Q03468 1493 aa25.95■■□□□ 1.74
RAB17-202ENST00000392001 PDS5BQ9NTI5 1447 aa25.93■■□□□ 1.74
RAB17-202ENST00000392001 SYNJ1O43426 1573 aa25.91■■□□□ 1.74
RAB17-202ENST00000392001 TOP2BQ02880 1626 aa25.85■■□□□ 1.73
RAB17-202ENST00000392001 CUX1P39880 1505 aa25.84■■□□□ 1.73
RAB17-202ENST00000392001 BIVM-ERCC5R4GMW8 1640 aa25.83■■□□□ 1.73
RAB17-202ENST00000392001 CEP164Q9UPV0 1460 aa25.82■■□□□ 1.72
RAB17-202ENST00000392001 KIF21AQ7Z4S6 1674 aa25.77■■□□□ 1.72
RAB17-202ENST00000392001 DNMBPQ6XZF7 1577 aa25.7■■□□□ 1.7
RAB17-202ENST00000392001 CUX2O14529 1486 aa25.69■■□□□ 1.7
RAB17-202ENST00000392001 TOPBP1Q92547 1522 aa25.67■■□□□ 1.7
RAB17-202ENST00000392001 URB2Q14146 1524 aaKnown RBP25.66■■□□□ 1.7
RAB17-202ENST00000392001 SOGA1O94964 1423 aa25.59■■□□□ 1.69
RAB17-202ENST00000392001 MRC2Q9UBG0 1479 aa25.59■■□□□ 1.69
RAB17-202ENST00000392001 FGD5Q6ZNL6 1462 aa25.58■■□□□ 1.69
RAB17-202ENST00000392001 FAM9AQ8IZU1 332 aaPredicted RBP25.54■■□□□ 1.68
RAB17-202ENST00000392001 EEA1Q15075 1411 aa25.53■■□□□ 1.68
RAB17-202ENST00000392001 THOC2Q8NI27 1593 aaKnown RBP25.53■■□□□ 1.68
RAB17-202ENST00000392001 POLA1P09884 1462 aaPredicted RBP25.52■■□□□ 1.68
RAB17-202ENST00000392001 RUSC2Q8N2Y8 1516 aa25.51■■□□□ 1.67
RAB17-202ENST00000392001 WDR62O43379 1518 aa25.48■■□□□ 1.67
RAB17-202ENST00000392001 RAD54L2Q9Y4B4 1467 aa25.41■■□□□ 1.66
RAB17-202ENST00000392001 CSRNP3Q8WYN3 585 aa25.41■■□□□ 1.66
RAB17-202ENST00000392001 KIF27Q86VH2 1401 aa25.39■■□□□ 1.66
RAB17-202ENST00000392001 ABCA10Q8WWZ4 1543 aa25.39■■□□□ 1.66
RAB17-202ENST00000392001 LOC105371045A0A1W2PR82 267 aa25.36■■□□□ 1.65
RAB17-202ENST00000392001 TARBP1Q13395 1621 aaKnown RBP25.32■■□□□ 1.64
RAB17-202ENST00000392001 WDR97A6NE52 1622 aa25.31■■□□□ 1.64
RAB17-202ENST00000392001 IFT140Q96RY7 1462 aa25.25■■□□□ 1.63
RAB17-202ENST00000392001 IGF1RP08069 1367 aa25.22■■□□□ 1.63
RAB17-202ENST00000392001 TDRD9Q8NDG6 1382 aaKnown RBP25.2■■□□□ 1.62
RAB17-202ENST00000392001 KIF21BO75037 1637 aa25.19■■□□□ 1.62
RAB17-202ENST00000392001 ABCA5Q8WWZ7 1642 aa25.19■■□□□ 1.62
RAB17-202ENST00000392001 PRXQ9BXM0 1461 aa25.18■■□□□ 1.62
RAB17-202ENST00000392001 GAPVD1Q14C86 1478 aa25.15■■□□□ 1.62
RAB17-202ENST00000392001 EHMT2Q96KQ7 1210 aa25.13■■□□□ 1.61
RAB17-202ENST00000392001 GOLGA3Q08378 1498 aa25.13■■□□□ 1.61
RAB17-202ENST00000392001 DNAJC5Q9H3Z4 198 aa25.1■■□□□ 1.61
RAB17-202ENST00000392001 ERICH3Q5RHP9 1530 aa25.09■■□□□ 1.61
RAB17-202ENST00000392001 ZNF608Q9ULD9 1512 aaPredicted RBP25.09■■□□□ 1.61
RAB17-202ENST00000392001 AQRO60306 1485 aaKnown RBP eCLIP25.08■■□□□ 1.612e-7■■■■□ 21.3
RAB17-202ENST00000392001 RAPGEF2Q9Y4G8 1499 aa25.08■■□□□ 1.61
RAB17-202ENST00000392001 CARMIL1Q5VZK9 1371 aa25.06■■□□□ 1.6
RAB17-202ENST00000392001 TNIKQ9UKE5 1360 aa25.03■■□□□ 1.6
RAB17-202ENST00000392001 CUL7Q14999 1698 aa25.02■■□□□ 1.6
RAB17-202ENST00000392001 UBTFP17480 764 aaKnown RBP25■■□□□ 1.59
RAB17-202ENST00000392001 GRIN2BQ13224 1484 aa25■■□□□ 1.59
RAB17-202ENST00000392001 PBRM1Q86U86 1689 aa24.99■■□□□ 1.59
RAB17-202ENST00000392001 EIF4G3O43432 1585 aaKnown RBP24.99■■□□□ 1.59
RAB17-202ENST00000392001 FHAD1B1AJZ9 1412 aa24.89■■□□□ 1.57
RAB17-202ENST00000392001 ADAMTS12P58397 1594 aa24.86■■□□□ 1.57
RAB17-202ENST00000392001 SNAPC4Q5SXM2 1469 aa24.84■■□□□ 1.57
RAB17-202ENST00000392001 CEP162Q5TB80 1403 aa24.83■■□□□ 1.57
RAB17-202ENST00000392001 MAGI1Q96QZ7 1491 aaPredicted RBP24.83■■□□□ 1.57
RAB17-202ENST00000392001 SYNJ2O15056 1496 aa24.73■■□□□ 1.55
RAB17-202ENST00000392001 CLIP1P30622 1438 aa24.71■■□□□ 1.55
RAB17-202ENST00000392001 OSCARQ8IYS5 282 aa24.7■■□□□ 1.54
RAB17-202ENST00000392001 GRIN2AQ12879 1464 aa24.69■■□□□ 1.54
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