RNA–Protein interactions for RNA: ENST00000491407.1

PPP1R35-205, Transcript of protein phosphatase 1 regulatory subunit 35, humanhuman

TSL 5

Gene PPP1R35, Length 942 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R35-205ENST00000491407 NISCHQ9Y2I1 1504 aa68■■■■■ 8.48
PPP1R35-205ENST00000491407 ABCC9O60706 1549 aa61.85■■■■■ 7.49
PPP1R35-205ENST00000491407 CCDC180Q9P1Z9 1646 aa61.29■■■■■ 7.4
PPP1R35-205ENST00000491407 RB1CC1Q8TDY2 1594 aa58.62■■■■■ 6.97
PPP1R35-205ENST00000491407 DNAJC5BQ9UF47 199 aa58.49■■■■■ 6.95
PPP1R35-205ENST00000491407 NACADO15069 1562 aa58.06■■■■■ 6.88
PPP1R35-205ENST00000491407 DCAF8L2P0C7V8 631 aa57.73■■■■■ 6.83
PPP1R35-205ENST00000491407 PABPN1Q86U42 306 aaKnown RBP eCLIP57.49■■■■■ 6.797e-6■□□□□ 10.4
PPP1R35-205ENST00000491407 UNC13AQ9UPW8 1703 aa57.35■■■■■ 6.77
PPP1R35-205ENST00000491407 MYO15BQ96JP2 1530 aa57.02■■■■■ 6.72
PPP1R35-205ENST00000491407 BICRAQ9NZM4 1560 aa56.91■■■■■ 6.7
PPP1R35-205ENST00000491407 ZCCHC6Q5VYS8 1495 aaKnown RBP56.22■■■■■ 6.59
PPP1R35-205ENST00000491407 DCAF1Q9Y4B6 1507 aa56.1■■■■■ 6.57
PPP1R35-205ENST00000491407 SHROOM4Q9ULL8 1493 aa56.04■■■■■ 6.56
PPP1R35-205ENST00000491407 CC2D2AQ9P2K1 1620 aa55.84■■■■■ 6.53
PPP1R35-205ENST00000491407 SCRIBQ14160 1630 aa55.83■■■■■ 6.53
PPP1R35-205ENST00000491407 CECR2Q9BXF3 1484 aa55.75■■■■■ 6.52
PPP1R35-205ENST00000491407 EIF4G1Q04637 1599 aaKnown RBP55.57■■■■■ 6.49
PPP1R35-205ENST00000491407 DNAJC5Q9H3Z4 198 aa54.12■■■■■ 6.25
PPP1R35-205ENST00000491407 NCAPD3P42695 1498 aa53.58■■■■■ 6.17
PPP1R35-205ENST00000491407 CUX2O14529 1486 aa53.51■■■■■ 6.16
PPP1R35-205ENST00000491407 ERCC6Q03468 1493 aa53.45■■■■■ 6.15
PPP1R35-205ENST00000491407 ATAD2BQ9ULI0 1458 aa53.36■■■■■ 6.13
PPP1R35-205ENST00000491407 SMARCA2P51531 1590 aa53.19■■■■■ 6.11
PPP1R35-205ENST00000491407 SMARCA4P51532 1647 aa53.18■■■■■ 6.1
PPP1R35-205ENST00000491407 HMGXB3Q12766 1538 aa53.14■■■■■ 6.1
PPP1R35-205ENST00000491407 NESP48681 1621 aa52.96■■■■■ 6.07
PPP1R35-205ENST00000491407 BAZ1BQ9UIG0 1483 aaKnown RBP52.83■■■■■ 6.05
PPP1R35-205ENST00000491407 BAZ1AQ9NRL2 1556 aaPredicted RBP52.83■■■■■ 6.05
PPP1R35-205ENST00000491407 PEG3Q9GZU2 1588 aa52.64■■■■■ 6.02
PPP1R35-205ENST00000491407 THOC2Q8NI27 1593 aaKnown RBP52.53■■■■■ 6
PPP1R35-205ENST00000491407 LAMC3Q9Y6N6 1575 aa52.5■■■■■ 5.99
PPP1R35-205ENST00000491407 MROH2BQ7Z745 1585 aa52.4■■■■■ 5.98
PPP1R35-205ENST00000491407 KIF21AQ7Z4S6 1674 aa52.31■■■■■ 5.96
PPP1R35-205ENST00000491407 PDS5BQ9NTI5 1447 aa52.21■■■■■ 5.95
PPP1R35-205ENST00000491407 CADPSQ9ULU8 1353 aa51.94■■■■■ 5.9
PPP1R35-205ENST00000491407 MRC2Q9UBG0 1479 aa51.8■■■■■ 5.88
PPP1R35-205ENST00000491407 WIZO95785 1651 aa51.78■■■■■ 5.88
PPP1R35-205ENST00000491407 WDR62O43379 1518 aa51.67■■■■■ 5.86
PPP1R35-205ENST00000491407 TRIM41Q8WV44 630 aa51.58■■■■■ 5.85
PPP1R35-205ENST00000491407 CEP164Q9UPV0 1460 aa51.49■■■■■ 5.83
PPP1R35-205ENST00000491407 FANCD2Q9BXW9 1451 aa51.37■■■■■ 5.81
PPP1R35-205ENST00000491407 CFTRP13569 1480 aa51.22■■■■■ 5.79
PPP1R35-205ENST00000491407 RSF1Q96T23 1441 aaPredicted RBP51.09■■■■■ 5.77
PPP1R35-205ENST00000491407 TOP2AP11388 1531 aaKnown RBP51.05■■■■■ 5.76
PPP1R35-205ENST00000491407 OSCARQ8IYS5 282 aa51■■■■■ 5.75
PPP1R35-205ENST00000491407 URB2Q14146 1524 aaKnown RBP50.98■■■■■ 5.75
PPP1R35-205ENST00000491407 PRDM2Q13029 1718 aa50.76■■■■■ 5.72
PPP1R35-205ENST00000491407 CCDC88BA6NC98 1476 aa50.48■■■■■ 5.67
PPP1R35-205ENST00000491407 IFT140Q96RY7 1462 aa50.46■■■■■ 5.67
PPP1R35-205ENST00000491407 ZNF608Q9ULD9 1512 aaPredicted RBP50.45■■■■■ 5.67
PPP1R35-205ENST00000491407 RIMBP3CA6NJZ7 1639 aa50.41■■■■■ 5.66
PPP1R35-205ENST00000491407 RIMBP3BA6NNM3 1639 aa50.41■■■■■ 5.66
PPP1R35-205ENST00000491407 RIMBP3Q9UFD9 1639 aa50.41■■■■■ 5.66
PPP1R35-205ENST00000491407 TOPBP1Q92547 1522 aa50.34■■■■■ 5.65
PPP1R35-205ENST00000491407 ABCC8Q09428 1581 aa50.19■■■■■ 5.63
PPP1R35-205ENST00000491407 ARHGEF11O15085 1522 aa50.17■■■■■ 5.62
PPP1R35-205ENST00000491407 EIF4G3O43432 1585 aaKnown RBP50.16■■■■■ 5.62
PPP1R35-205ENST00000491407 DNMBPQ6XZF7 1577 aa50.1■■■■■ 5.61
PPP1R35-205ENST00000491407 CHD1O14646 1710 aa49.94■■■■■ 5.59
PPP1R35-205ENST00000491407 TARBP1Q13395 1621 aaKnown RBP49.93■■■■■ 5.58
PPP1R35-205ENST00000491407 AQRO60306 1485 aaKnown RBP eCLIP49.93■■■■■ 5.586e-9■■■□□ 15
PPP1R35-205ENST00000491407 CYB5RLQ6IPT4 315 aa49.87■■■■■ 5.57
PPP1R35-205ENST00000491407 POLA1P09884 1462 aaPredicted RBP49.78■■■■■ 5.56
PPP1R35-205ENST00000491407 FBLN2P98095 1184 aa49.77■■■■■ 5.56
PPP1R35-205ENST00000491407 ARAP1Q96P48 1450 aa49.63■■■■■ 5.53
PPP1R35-205ENST00000491407 RAD54L2Q9Y4B4 1467 aa49.63■■■■■ 5.53
PPP1R35-205ENST00000491407 SOGA1O94964 1423 aa49.56■■■■■ 5.52
PPP1R35-205ENST00000491407 TDRD9Q8NDG6 1382 aaKnown RBP49.53■■■■■ 5.52
PPP1R35-205ENST00000491407 TRHP20396 242 aaPredicted RBP49.53■■■■■ 5.52
PPP1R35-205ENST00000491407 SNAPC4Q5SXM2 1469 aa49.4■■■■■ 5.5
PPP1R35-205ENST00000491407 FGD5Q6ZNL6 1462 aa49.4■■■■■ 5.5
PPP1R35-205ENST00000491407 WDR97A6NE52 1622 aa49.37■■■■■ 5.49
PPP1R35-205ENST00000491407 CLASP1Q7Z460 1538 aa49.29■■■■■ 5.48
PPP1R35-205ENST00000491407 CHMP7Q8WUX9 453 aaPredicted RBP49.28■■■■■ 5.48
PPP1R35-205ENST00000491407 CUX1P39880 1505 aa49.26■■■■■ 5.48
PPP1R35-205ENST00000491407 MAGI1Q96QZ7 1491 aaPredicted RBP49.24■■■■■ 5.47
PPP1R35-205ENST00000491407 SYNJ1O43426 1573 aa49.24■■■■■ 5.47
PPP1R35-205ENST00000491407 GRIN2BQ13224 1484 aa49.18■■■■■ 5.46
PPP1R35-205ENST00000491407 SYNJ2O15056 1496 aa49.08■■■■■ 5.45
PPP1R35-205ENST00000491407 PBRM1Q86U86 1689 aa49.01■■■■■ 5.44
PPP1R35-205ENST00000491407 GAPVD1Q14C86 1478 aa48.94■■■■■ 5.43
PPP1R35-205ENST00000491407 SUPT5HO00267 1087 aaKnown RBP48.81■■■■■ 5.4
PPP1R35-205ENST00000491407 ABCA10Q8WWZ4 1543 aa48.79■■■■■ 5.4
PPP1R35-205ENST00000491407 ABCA5Q8WWZ7 1642 aa48.79■■■■■ 5.4
PPP1R35-205ENST00000491407 GRIN2AQ12879 1464 aa48.55■■■■■ 5.36
PPP1R35-205ENST00000491407 AEBP2Q6ZN18 517 aaPredicted RBP48.51■■■■■ 5.36
PPP1R35-205ENST00000491407 ERCC6L2Q5T890 1561 aa48.5■■■■■ 5.35
PPP1R35-205ENST00000491407 WRNQ14191 1432 aaPredicted RBP eCLIP48.49■■■■■ 5.35
PPP1R35-205ENST00000491407 ADAMTS12P58397 1594 aa48.46■■■■■ 5.35
PPP1R35-205ENST00000491407 CEP170Q5SW79 1584 aa48.42■■■■■ 5.34
PPP1R35-205ENST00000491407 NUP160Q12769 1436 aa48.39■■■■■ 5.34
PPP1R35-205ENST00000491407 BIVM-ERCC5R4GMW8 1640 aa48.35■■■■■ 5.33
PPP1R35-205ENST00000491407 TOP2BQ02880 1626 aa48.32■■■■■ 5.33
PPP1R35-205ENST00000491407 FHAD1B1AJZ9 1412 aa48.29■■■■■ 5.32
PPP1R35-205ENST00000491407 SHROOM2Q13796 1616 aa48.26■■■■■ 5.32
PPP1R35-205ENST00000491407 ERICH3Q5RHP9 1530 aa48.17■■■■■ 5.3
PPP1R35-205ENST00000491407 PRG4Q92954 1404 aaPredicted RBP48■■■■■ 5.27
PPP1R35-205ENST00000491407 KIF13AQ9H1H9 1805 aa47.97■■■■■ 5.27
PPP1R35-205ENST00000491407 JPH4Q96JJ6 628 aa47.93■■■■■ 5.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms