RNA–Protein interactions for RNA: ENST00000563749.1

RPL13-212, Transcript of ribosomal protein L13, humanhuman

Gene RPL13, Length 2,367 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13-212ENST00000563749 NISCHQ9Y2I1 1504 aa46.91■■■■■ 5.1
RPL13-212ENST00000563749 CCDC180Q9P1Z9 1646 aa40.25■■■■■ 4.03
RPL13-212ENST00000563749 ZCCHC6Q5VYS8 1495 aaKnown RBP39.65■■■■□ 3.94
RPL13-212ENST00000563749 SHROOM4Q9ULL8 1493 aa39.24■■■■□ 3.87
RPL13-212ENST00000563749 DCAF1Q9Y4B6 1507 aa38.74■■■■□ 3.79
RPL13-212ENST00000563749 DCAF8L2P0C7V8 631 aa38.46■■■■□ 3.75
RPL13-212ENST00000563749 SUPT5HO00267 1087 aaKnown RBP38.36■■■■□ 3.73
RPL13-212ENST00000563749 MYO15BQ96JP2 1530 aa37.81■■■■□ 3.64
RPL13-212ENST00000563749 ABCC9O60706 1549 aa37.34■■■■□ 3.57
RPL13-212ENST00000563749 CHIC1Q5VXU3 224 aa37.34■■■■□ 3.57
RPL13-212ENST00000563749 SCRIBQ14160 1630 aa37.3■■■■□ 3.56
RPL13-212ENST00000563749 NACADO15069 1562 aa37.24■■■■□ 3.55
RPL13-212ENST00000563749 RSF1Q96T23 1441 aaPredicted RBP36.9■■■■□ 3.5
RPL13-212ENST00000563749 RB1CC1Q8TDY2 1594 aa36.64■■■■□ 3.46
RPL13-212ENST00000563749 CECR2Q9BXF3 1484 aa36.41■■■■□ 3.42
RPL13-212ENST00000563749 MROH2BQ7Z745 1585 aa36.33■■■■□ 3.41
RPL13-212ENST00000563749 BAZ1AQ9NRL2 1556 aaPredicted RBP36.11■■■■□ 3.37
RPL13-212ENST00000563749 WIZO95785 1651 aa36.09■■■■□ 3.37
RPL13-212ENST00000563749 LOC105371045A0A1W2PR82 267 aa36■■■■□ 3.35
RPL13-212ENST00000563749 UNC13AQ9UPW8 1703 aa35.97■■■■□ 3.35
RPL13-212ENST00000563749 TRIM41Q8WV44 630 aa35.94■■■■□ 3.34
RPL13-212ENST00000563749 SMARCA4P51532 1647 aa35.79■■■■□ 3.32
RPL13-212ENST00000563749 TOP2AP11388 1531 aaKnown RBP35.7■■■■□ 3.31
RPL13-212ENST00000563749 EIF4G1Q04637 1599 aaKnown RBP35.64■■■■□ 3.3
RPL13-212ENST00000563749 PCGF6Q9BYE7 350 aa35.64■■■■□ 3.3
RPL13-212ENST00000563749 HRCP23327 699 aa35.59■■■■□ 3.29
RPL13-212ENST00000563749 BICRAQ9NZM4 1560 aa35.56■■■■□ 3.28
RPL13-212ENST00000563749 SMARCA2P51531 1590 aa35.43■■■■□ 3.26
RPL13-212ENST00000563749 CCDC88BA6NC98 1476 aa35.41■■■■□ 3.26
RPL13-212ENST00000563749 FAM9AQ8IZU1 332 aaPredicted RBP35.37■■■■□ 3.25
RPL13-212ENST00000563749 PABPN1Q86U42 306 aaKnown RBP eCLIP35.3■■■■□ 3.242e-10■□□□□ 10.4
RPL13-212ENST00000563749 TRIM26Q12899 539 aaPredicted RBP35.29■■■■□ 3.24
RPL13-212ENST00000563749 PEG3Q9GZU2 1588 aa35.28■■■■□ 3.24
RPL13-212ENST00000563749 ABCC8Q09428 1581 aa35.08■■■■□ 3.21
RPL13-212ENST00000563749 ATAD2BQ9ULI0 1458 aa34.93■■■■□ 3.18
RPL13-212ENST00000563749 EHMT2Q96KQ7 1210 aa34.86■■■■□ 3.17
RPL13-212ENST00000563749 EEA1Q15075 1411 aa34.8■■■■□ 3.16
RPL13-212ENST00000563749 BAZ1BQ9UIG0 1483 aaKnown RBP34.79■■■■□ 3.16
RPL13-212ENST00000563749 SOGA1O94964 1423 aa34.68■■■■□ 3.14
RPL13-212ENST00000563749 WRNQ14191 1432 aaPredicted RBP eCLIP34.68■■■■□ 3.14
RPL13-212ENST00000563749 PPARGC1BQ86YN6 1023 aaKnown RBP34.6■■■■□ 3.13
RPL13-212ENST00000563749 CSRNP3Q8WYN3 585 aa34.54■■■■□ 3.12
RPL13-212ENST00000563749 TNIKQ9UKE5 1360 aa34.54■■■■□ 3.12
RPL13-212ENST00000563749 ZEB1P37275 1124 aaPredicted RBP34.5■■■■□ 3.11
RPL13-212ENST00000563749 SYNJ1O43426 1573 aa34.49■■■■□ 3.11
RPL13-212ENST00000563749 RUSC2Q8N2Y8 1516 aa34.49■■■■□ 3.11
RPL13-212ENST00000563749 CEP162Q5TB80 1403 aa34.45■■■■□ 3.11
RPL13-212ENST00000563749 HMGXB3Q12766 1538 aa34.43■■■■□ 3.1
RPL13-212ENST00000563749 NCAPD3P42695 1498 aa34.4■■■■□ 3.1
RPL13-212ENST00000563749 GOLGA3Q08378 1498 aa34.4■■■■□ 3.1
RPL13-212ENST00000563749 KIF21BO75037 1637 aa34.28■■■■□ 3.08
RPL13-212ENST00000563749 CEP164Q9UPV0 1460 aa34.27■■■■□ 3.08
RPL13-212ENST00000563749 TOP2BQ02880 1626 aa34.23■■■■□ 3.07
RPL13-212ENST00000563749 UBTFP17480 764 aaKnown RBP34.23■■■■□ 3.07
RPL13-212ENST00000563749 BIVM-ERCC5R4GMW8 1640 aa34.16■■■■□ 3.06
RPL13-212ENST00000563749 CFTRP13569 1480 aa33.99■■■■□ 3.03
RPL13-212ENST00000563749 RAPGEF2Q9Y4G8 1499 aa33.91■■■■□ 3.02
RPL13-212ENST00000563749 CLIP1P30622 1438 aa33.91■■■■□ 3.02
RPL13-212ENST00000563749 CUX1P39880 1505 aa33.88■■■■□ 3.01
RPL13-212ENST00000563749 ERICH3Q5RHP9 1530 aa33.82■■■■□ 3.01
RPL13-212ENST00000563749 PRDM2Q13029 1718 aa33.81■■■■□ 3
RPL13-212ENST00000563749 VPS8Q8N3P4 1428 aa33.78■■■■□ 3
RPL13-212ENST00000563749 PRXQ9BXM0 1461 aa33.77■■■■□ 3
RPL13-212ENST00000563749 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.71■■■□□ 2.99
RPL13-212ENST00000563749 CCER1Q8TC90 406 aaPredicted RBP33.7■■■□□ 2.99
RPL13-212ENST00000563749 TTBK1Q5TCY1 1321 aaPredicted RBP33.7■■■□□ 2.99
RPL13-212ENST00000563749 KIF27Q86VH2 1401 aa33.69■■■□□ 2.98
RPL13-212ENST00000563749 CADPSQ9ULU8 1353 aa33.63■■■□□ 2.97
RPL13-212ENST00000563749 CC2D2AQ9P2K1 1620 aa33.58■■■□□ 2.97
RPL13-212ENST00000563749 APLP2Q06481 763 aa33.49■■■□□ 2.95
RPL13-212ENST00000563749 ARAP1Q96P48 1450 aa33.42■■■□□ 2.94
RPL13-212ENST00000563749 RANGAP1P46060 587 aaPredicted RBP33.35■■■□□ 2.93
RPL13-212ENST00000563749 CUX2O14529 1486 aa33.34■■■□□ 2.93
RPL13-212ENST00000563749 FGD5Q6ZNL6 1462 aa33.31■■■□□ 2.92
RPL13-212ENST00000563749 IGF1RP08069 1367 aa33.29■■■□□ 2.92
RPL13-212ENST00000563749 FANCD2Q9BXW9 1451 aa33.27■■■□□ 2.92
RPL13-212ENST00000563749 ARHGAP35Q9NRY4 1499 aa33.19■■■□□ 2.9
RPL13-212ENST00000563749 HNRNPUL2Q1KMD3 747 aaKnown RBP33.17■■■□□ 2.9
RPL13-212ENST00000563749 DNMBPQ6XZF7 1577 aa33.16■■■□□ 2.9
RPL13-212ENST00000563749 CARMIL1Q5VZK9 1371 aa33.14■■■□□ 2.9
RPL13-212ENST00000563749 TOPBP1Q92547 1522 aa33.04■■■□□ 2.88
RPL13-212ENST00000563749 ABCA10Q8WWZ4 1543 aa33.03■■■□□ 2.88
RPL13-212ENST00000563749 KANK4Q5T7N3 995 aaPredicted RBP33.02■■■□□ 2.88
RPL13-212ENST00000563749 LAMC3Q9Y6N6 1575 aa33.01■■■□□ 2.87
RPL13-212ENST00000563749 NESP48681 1621 aa32.98■■■□□ 2.87
RPL13-212ENST00000563749 POLA1P09884 1462 aaPredicted RBP32.98■■■□□ 2.87
RPL13-212ENST00000563749 RRBP1Q9P2E9 1410 aaKnown RBP32.97■■■□□ 2.87
RPL13-212ENST00000563749 MAP3K1Q13233 1512 aa32.94■■■□□ 2.86
RPL13-212ENST00000563749 RAD54L2Q9Y4B4 1467 aa32.92■■■□□ 2.86
RPL13-212ENST00000563749 DIEXFQ68CQ4 756 aaKnown RBP32.87■■■□□ 2.85
RPL13-212ENST00000563749 DNAJC5BQ9UF47 199 aa32.87■■■□□ 2.85
RPL13-212ENST00000563749 CUL7Q14999 1698 aa32.86■■■□□ 2.85
RPL13-212ENST00000563749 TIAM1Q13009 1591 aa32.83■■■□□ 2.85
RPL13-212ENST00000563749 CLSPNQ9HAW4 1339 aa32.82■■■□□ 2.85
RPL13-212ENST00000563749 ZNF316A6NFI3 1004 aaPredicted RBP32.81■■■□□ 2.84
RPL13-212ENST00000563749 FHAD1B1AJZ9 1412 aa32.8■■■□□ 2.84
RPL13-212ENST00000563749 URB2Q14146 1524 aaKnown RBP32.79■■■□□ 2.84
RPL13-212ENST00000563749 WDR97A6NE52 1622 aa32.78■■■□□ 2.84
RPL13-212ENST00000563749 CCNB3Q8WWL7 1395 aa32.78■■■□□ 2.84
RPL13-212ENST00000563749 PDS5BQ9NTI5 1447 aa32.74■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms