RNA–Protein interactions for RNA: ENST00000493546.1

PLXNA3-207, Transcript of plexin A3, humanhuman

TSL 3

Gene PLXNA3, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA3-207ENST00000493546 NISCHQ9Y2I1 1504 aa22.87■■□□□ 1.25
PLXNA3-207ENST00000493546 ABCC9O60706 1549 aa20.71■□□□□ 0.91
PLXNA3-207ENST00000493546 CCDC180Q9P1Z9 1646 aa20.52■□□□□ 0.88
PLXNA3-207ENST00000493546 RB1CC1Q8TDY2 1594 aa19.61■□□□□ 0.73
PLXNA3-207ENST00000493546 DNAJC5BQ9UF47 199 aa19.5■□□□□ 0.71
PLXNA3-207ENST00000493546 DCAF8L2P0C7V8 631 aa19.48■□□□□ 0.71
PLXNA3-207ENST00000493546 NACADO15069 1562 aa19.44■□□□□ 0.7
PLXNA3-207ENST00000493546 PABPN1Q86U42 306 aaKnown RBP eCLIP19.3■□□□□ 0.687e-7■□□□□ 10.4
PLXNA3-207ENST00000493546 UNC13AQ9UPW8 1703 aa19.13■□□□□ 0.65
PLXNA3-207ENST00000493546 MYO15BQ96JP2 1530 aa19.1■□□□□ 0.65
PLXNA3-207ENST00000493546 BICRAQ9NZM4 1560 aa19.03■□□□□ 0.64
PLXNA3-207ENST00000493546 ZCCHC6Q5VYS8 1495 aaKnown RBP18.94■□□□□ 0.62
PLXNA3-207ENST00000493546 DCAF1Q9Y4B6 1507 aa18.84■□□□□ 0.61
PLXNA3-207ENST00000493546 SCRIBQ14160 1630 aa18.78■□□□□ 0.6
PLXNA3-207ENST00000493546 SHROOM4Q9ULL8 1493 aa18.74■□□□□ 0.59
PLXNA3-207ENST00000493546 CC2D2AQ9P2K1 1620 aa18.66■□□□□ 0.58
PLXNA3-207ENST00000493546 CECR2Q9BXF3 1484 aa18.65■□□□□ 0.58
PLXNA3-207ENST00000493546 EIF4G1Q04637 1599 aaKnown RBP18.59■□□□□ 0.57
PLXNA3-207ENST00000493546 NCAPD3P42695 1498 aa17.96■□□□□ 0.47
PLXNA3-207ENST00000493546 DNAJC5Q9H3Z4 198 aa17.95■□□□□ 0.46
PLXNA3-207ENST00000493546 ATAD2BQ9ULI0 1458 aa17.92■□□□□ 0.46
PLXNA3-207ENST00000493546 ERCC6Q03468 1493 aa17.9■□□□□ 0.46
PLXNA3-207ENST00000493546 SMARCA4P51532 1647 aa17.87■□□□□ 0.45
PLXNA3-207ENST00000493546 SMARCA2P51531 1590 aa17.85■□□□□ 0.45
PLXNA3-207ENST00000493546 CUX2O14529 1486 aa17.84■□□□□ 0.45
PLXNA3-207ENST00000493546 HMGXB3Q12766 1538 aa17.81■□□□□ 0.44
PLXNA3-207ENST00000493546 SUPT5HO00267 1087 aaKnown RBP17.79■□□□□ 0.44
PLXNA3-207ENST00000493546 BAZ1AQ9NRL2 1556 aaPredicted RBP17.76■□□□□ 0.43
PLXNA3-207ENST00000493546 NESP48681 1621 aa17.76■□□□□ 0.43
PLXNA3-207ENST00000493546 BAZ1BQ9UIG0 1483 aaKnown RBP17.75■□□□□ 0.43
PLXNA3-207ENST00000493546 PEG3Q9GZU2 1588 aa17.65■□□□□ 0.42
PLXNA3-207ENST00000493546 MROH2BQ7Z745 1585 aa17.64■□□□□ 0.41
PLXNA3-207ENST00000493546 LAMC3Q9Y6N6 1575 aa17.56■□□□□ 0.4
PLXNA3-207ENST00000493546 THOC2Q8NI27 1593 aaKnown RBP17.55■□□□□ 0.4
PLXNA3-207ENST00000493546 PDS5BQ9NTI5 1447 aa17.51■□□□□ 0.39
PLXNA3-207ENST00000493546 KIF21AQ7Z4S6 1674 aa17.48■□□□□ 0.39
PLXNA3-207ENST00000493546 RSF1Q96T23 1441 aaPredicted RBP17.45■□□□□ 0.38
PLXNA3-207ENST00000493546 CADPSQ9ULU8 1353 aa17.44■□□□□ 0.38
PLXNA3-207ENST00000493546 WIZO95785 1651 aa17.42■□□□□ 0.38
PLXNA3-207ENST00000493546 MRC2Q9UBG0 1479 aa17.36■□□□□ 0.37
PLXNA3-207ENST00000493546 WDR62O43379 1518 aa17.29■□□□□ 0.36
PLXNA3-207ENST00000493546 CEP164Q9UPV0 1460 aa17.28■□□□□ 0.36
PLXNA3-207ENST00000493546 FANCD2Q9BXW9 1451 aa17.25■□□□□ 0.35
PLXNA3-207ENST00000493546 TRIM41Q8WV44 630 aa17.22■□□□□ 0.35
PLXNA3-207ENST00000493546 CFTRP13569 1480 aa17.2■□□□□ 0.34
PLXNA3-207ENST00000493546 TOP2AP11388 1531 aaKnown RBP17.19■□□□□ 0.34
PLXNA3-207ENST00000493546 URB2Q14146 1524 aaKnown RBP17.11■□□□□ 0.33
PLXNA3-207ENST00000493546 OSCARQ8IYS5 282 aa17.05■□□□□ 0.32
PLXNA3-207ENST00000493546 CHIC1Q5VXU3 224 aa17.04■□□□□ 0.32
PLXNA3-207ENST00000493546 CCDC88BA6NC98 1476 aa17.01■□□□□ 0.31
PLXNA3-207ENST00000493546 PRDM2Q13029 1718 aa16.97■□□□□ 0.31
PLXNA3-207ENST00000493546 IFT140Q96RY7 1462 aa16.93■□□□□ 0.3
PLXNA3-207ENST00000493546 ZNF608Q9ULD9 1512 aaPredicted RBP16.92■□□□□ 0.3
PLXNA3-207ENST00000493546 TOPBP1Q92547 1522 aa16.91■□□□□ 0.3
PLXNA3-207ENST00000493546 ABCC8Q09428 1581 aa16.84■□□□□ 0.29
PLXNA3-207ENST00000493546 DNMBPQ6XZF7 1577 aa16.82■□□□□ 0.28
PLXNA3-207ENST00000493546 RIMBP3CA6NJZ7 1639 aa16.81■□□□□ 0.28
PLXNA3-207ENST00000493546 RIMBP3BA6NNM3 1639 aa16.81■□□□□ 0.28
PLXNA3-207ENST00000493546 RIMBP3Q9UFD9 1639 aa16.81■□□□□ 0.28
PLXNA3-207ENST00000493546 EIF4G3O43432 1585 aaKnown RBP16.8■□□□□ 0.28
PLXNA3-207ENST00000493546 AQRO60306 1485 aaKnown RBP eCLIP16.77■□□□□ 0.282e-6■■■□□ 15.2
PLXNA3-207ENST00000493546 ARHGEF11O15085 1522 aa16.75■□□□□ 0.27
PLXNA3-207ENST00000493546 FBLN2P98095 1184 aa16.74■□□□□ 0.27
PLXNA3-207ENST00000493546 POLA1P09884 1462 aaPredicted RBP16.73■□□□□ 0.27
PLXNA3-207ENST00000493546 TARBP1Q13395 1621 aaKnown RBP16.73■□□□□ 0.27
PLXNA3-207ENST00000493546 RAD54L2Q9Y4B4 1467 aa16.7■□□□□ 0.26
PLXNA3-207ENST00000493546 CYB5RLQ6IPT4 315 aa16.69■□□□□ 0.26
PLXNA3-207ENST00000493546 CHD1O14646 1710 aa16.68■□□□□ 0.26
PLXNA3-207ENST00000493546 SOGA1O94964 1423 aa16.67■□□□□ 0.26
PLXNA3-207ENST00000493546 TDRD9Q8NDG6 1382 aaKnown RBP16.66■□□□□ 0.26
PLXNA3-207ENST00000493546 FGD5Q6ZNL6 1462 aa16.62■□□□□ 0.25
PLXNA3-207ENST00000493546 SNAPC4Q5SXM2 1469 aa16.6■□□□□ 0.25
PLXNA3-207ENST00000493546 ARAP1Q96P48 1450 aa16.59■□□□□ 0.25
PLXNA3-207ENST00000493546 CUX1P39880 1505 aa16.58■□□□□ 0.24
PLXNA3-207ENST00000493546 CHMP7Q8WUX9 453 aaPredicted RBP16.57■□□□□ 0.24
PLXNA3-207ENST00000493546 TRHP20396 242 aaPredicted RBP16.56■□□□□ 0.24
PLXNA3-207ENST00000493546 WDR97A6NE52 1622 aa16.53■□□□□ 0.24
PLXNA3-207ENST00000493546 GRIN2BQ13224 1484 aa16.52■□□□□ 0.23
PLXNA3-207ENST00000493546 WRNQ14191 1432 aaPredicted RBP eCLIP16.52■□□□□ 0.23
PLXNA3-207ENST00000493546 MAGI1Q96QZ7 1491 aaPredicted RBP16.51■□□□□ 0.23
PLXNA3-207ENST00000493546 SYNJ1O43426 1573 aa16.49■□□□□ 0.23
PLXNA3-207ENST00000493546 CLASP1Q7Z460 1538 aa16.49■□□□□ 0.23
PLXNA3-207ENST00000493546 EEA1Q15075 1411 aa16.47■□□□□ 0.23
PLXNA3-207ENST00000493546 SYNJ2O15056 1496 aa16.47■□□□□ 0.23
PLXNA3-207ENST00000493546 GAPVD1Q14C86 1478 aa16.46■□□□□ 0.23
PLXNA3-207ENST00000493546 PBRM1Q86U86 1689 aa16.42■□□□□ 0.22
PLXNA3-207ENST00000493546 ABCA10Q8WWZ4 1543 aa16.4■□□□□ 0.22
PLXNA3-207ENST00000493546 FAM9AQ8IZU1 332 aaPredicted RBP16.39■□□□□ 0.21
PLXNA3-207ENST00000493546 ABCA5Q8WWZ7 1642 aa16.37■□□□□ 0.21
PLXNA3-207ENST00000493546 TOP2BQ02880 1626 aa16.32■□□□□ 0.2
PLXNA3-207ENST00000493546 LOC105371045A0A1W2PR82 267 aa16.31■□□□□ 0.2
PLXNA3-207ENST00000493546 GRIN2AQ12879 1464 aa16.3■□□□□ 0.2
PLXNA3-207ENST00000493546 BIVM-ERCC5R4GMW8 1640 aa16.28■□□□□ 0.2
PLXNA3-207ENST00000493546 ADAMTS12P58397 1594 aa16.27■□□□□ 0.2
PLXNA3-207ENST00000493546 ERCC6L2Q5T890 1561 aa16.26■□□□□ 0.19
PLXNA3-207ENST00000493546 CSRNP3Q8WYN3 585 aa16.25■□□□□ 0.19
PLXNA3-207ENST00000493546 FHAD1B1AJZ9 1412 aa16.24■□□□□ 0.19
PLXNA3-207ENST00000493546 NUP160Q12769 1436 aa16.24■□□□□ 0.19
PLXNA3-207ENST00000493546 CEP170Q5SW79 1584 aa16.24■□□□□ 0.19
PLXNA3-207ENST00000493546 ERICH3Q5RHP9 1530 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms