RNA–Protein interactions for RNA: ENST00000589478.1

ATP5D-204, Transcript of ATP synthase subunit delta, mitochondrial, humanhuman

TSL 2

Gene ATP5D, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP5D-204ENST00000589478 NISCHQ9Y2I1 1504 aa47.9■■■■■ 5.26
ATP5D-204ENST00000589478 CCDC180Q9P1Z9 1646 aa42.78■■■■■ 4.44
ATP5D-204ENST00000589478 ABCC9O60706 1549 aa42.08■■■■■ 4.33
ATP5D-204ENST00000589478 RB1CC1Q8TDY2 1594 aa40.41■■■■■ 4.06
ATP5D-204ENST00000589478 NACADO15069 1562 aa40.27■■■■■ 4.04
ATP5D-204ENST00000589478 DCAF8L2P0C7V8 631 aa40.16■■■■■ 4.02
ATP5D-204ENST00000589478 MYO15BQ96JP2 1530 aa39.92■■■■□ 3.98
ATP5D-204ENST00000589478 ZCCHC6Q5VYS8 1495 aaKnown RBP39.84■■■■□ 3.97
ATP5D-204ENST00000589478 DCAF1Q9Y4B6 1507 aa39.64■■■■□ 3.94
ATP5D-204ENST00000589478 UNC13AQ9UPW8 1703 aa39.44■■■■□ 3.9
ATP5D-204ENST00000589478 PABPN1Q86U42 306 aaKnown RBP eCLIP39.24■■■■□ 3.875e-7■□□□□ 10.4
ATP5D-204ENST00000589478 BICRAQ9NZM4 1560 aa39.1■■■■□ 3.85
ATP5D-204ENST00000589478 SCRIBQ14160 1630 aa38.98■■■■□ 3.83
ATP5D-204ENST00000589478 DNAJC5BQ9UF47 199 aa38.92■■■■□ 3.82
ATP5D-204ENST00000589478 SHROOM4Q9ULL8 1493 aa38.77■■■■□ 3.8
ATP5D-204ENST00000589478 EIF4G1Q04637 1599 aaKnown RBP38.15■■■■□ 3.7
ATP5D-204ENST00000589478 CC2D2AQ9P2K1 1620 aa38.06■■■■□ 3.68
ATP5D-204ENST00000589478 CECR2Q9BXF3 1484 aa37.86■■■■□ 3.65
ATP5D-204ENST00000589478 SMARCA4P51532 1647 aa37.25■■■■□ 3.55
ATP5D-204ENST00000589478 BAZ1AQ9NRL2 1556 aaPredicted RBP37.19■■■■□ 3.54
ATP5D-204ENST00000589478 NCAPD3P42695 1498 aa37.13■■■■□ 3.53
ATP5D-204ENST00000589478 SMARCA2P51531 1590 aa37.1■■■■□ 3.53
ATP5D-204ENST00000589478 ATAD2BQ9ULI0 1458 aa37.09■■■■□ 3.53
ATP5D-204ENST00000589478 HMGXB3Q12766 1538 aa36.95■■■■□ 3.51
ATP5D-204ENST00000589478 MROH2BQ7Z745 1585 aa36.88■■■■□ 3.49
ATP5D-204ENST00000589478 PEG3Q9GZU2 1588 aa36.88■■■■□ 3.49
ATP5D-204ENST00000589478 BAZ1BQ9UIG0 1483 aaKnown RBP36.82■■■■□ 3.49
ATP5D-204ENST00000589478 WIZO95785 1651 aa36.49■■■■□ 3.43
ATP5D-204ENST00000589478 ERCC6Q03468 1493 aa36.37■■■■□ 3.41
ATP5D-204ENST00000589478 RSF1Q96T23 1441 aaPredicted RBP36.35■■■■□ 3.41
ATP5D-204ENST00000589478 NESP48681 1621 aa36.3■■■■□ 3.4
ATP5D-204ENST00000589478 LAMC3Q9Y6N6 1575 aa36.24■■■■□ 3.39
ATP5D-204ENST00000589478 TOP2AP11388 1531 aaKnown RBP36.12■■■■□ 3.37
ATP5D-204ENST00000589478 CUX2O14529 1486 aa36.06■■■■□ 3.36
ATP5D-204ENST00000589478 CADPSQ9ULU8 1353 aa36.03■■■■□ 3.36
ATP5D-204ENST00000589478 PDS5BQ9NTI5 1447 aa36.01■■■■□ 3.36
ATP5D-204ENST00000589478 KIF21AQ7Z4S6 1674 aa35.91■■■■□ 3.34
ATP5D-204ENST00000589478 DNAJC5Q9H3Z4 198 aa35.89■■■■□ 3.34
ATP5D-204ENST00000589478 THOC2Q8NI27 1593 aaKnown RBP35.85■■■■□ 3.33
ATP5D-204ENST00000589478 CFTRP13569 1480 aa35.75■■■■□ 3.31
ATP5D-204ENST00000589478 CCDC88BA6NC98 1476 aa35.65■■■■□ 3.3
ATP5D-204ENST00000589478 CEP164Q9UPV0 1460 aa35.65■■■■□ 3.3
ATP5D-204ENST00000589478 FANCD2Q9BXW9 1451 aa35.64■■■■□ 3.3
ATP5D-204ENST00000589478 MRC2Q9UBG0 1479 aa35.64■■■■□ 3.3
ATP5D-204ENST00000589478 WDR62O43379 1518 aa35.53■■■■□ 3.28
ATP5D-204ENST00000589478 PRDM2Q13029 1718 aa35.53■■■■□ 3.28
ATP5D-204ENST00000589478 URB2Q14146 1524 aaKnown RBP35.27■■■■□ 3.24
ATP5D-204ENST00000589478 SUPT5HO00267 1087 aaKnown RBP35.24■■■■□ 3.23
ATP5D-204ENST00000589478 ABCC8Q09428 1581 aa35.06■■■■□ 3.2
ATP5D-204ENST00000589478 TOPBP1Q92547 1522 aa35.02■■■■□ 3.2
ATP5D-204ENST00000589478 DNMBPQ6XZF7 1577 aa34.99■■■■□ 3.19
ATP5D-204ENST00000589478 IFT140Q96RY7 1462 aa34.9■■■■□ 3.18
ATP5D-204ENST00000589478 ZNF608Q9ULD9 1512 aaPredicted RBP34.71■■■■□ 3.15
ATP5D-204ENST00000589478 POLA1P09884 1462 aaPredicted RBP34.71■■■■□ 3.15
ATP5D-204ENST00000589478 TARBP1Q13395 1621 aaKnown RBP34.66■■■■□ 3.14
ATP5D-204ENST00000589478 CUX1P39880 1505 aa34.63■■■■□ 3.13
ATP5D-204ENST00000589478 EIF4G3O43432 1585 aaKnown RBP34.62■■■■□ 3.13
ATP5D-204ENST00000589478 FGD5Q6ZNL6 1462 aa34.58■■■■□ 3.13
ATP5D-204ENST00000589478 SOGA1O94964 1423 aa34.56■■■■□ 3.12
ATP5D-204ENST00000589478 RAD54L2Q9Y4B4 1467 aa34.53■■■■□ 3.12
ATP5D-204ENST00000589478 OSCARQ8IYS5 282 aa34.49■■■■□ 3.11
ATP5D-204ENST00000589478 AQRO60306 1485 aaKnown RBP eCLIP34.49■■■■□ 3.112e-8■■■□□ 18.7
ATP5D-204ENST00000589478 WDR97A6NE52 1622 aa34.44■■■■□ 3.1
ATP5D-204ENST00000589478 TDRD9Q8NDG6 1382 aaKnown RBP34.38■■■■□ 3.09
ATP5D-204ENST00000589478 WRNQ14191 1432 aaPredicted RBP eCLIP34.33■■■■□ 3.09
ATP5D-204ENST00000589478 TOP2BQ02880 1626 aa34.29■■■■□ 3.08
ATP5D-204ENST00000589478 BIVM-ERCC5R4GMW8 1640 aa34.29■■■■□ 3.08
ATP5D-204ENST00000589478 CHD1O14646 1710 aa34.24■■■■□ 3.07
ATP5D-204ENST00000589478 ABCA10Q8WWZ4 1543 aa34.24■■■■□ 3.07
ATP5D-204ENST00000589478 SYNJ1O43426 1573 aa34.23■■■■□ 3.07
ATP5D-204ENST00000589478 GRIN2BQ13224 1484 aa34.22■■■■□ 3.07
ATP5D-204ENST00000589478 SNAPC4Q5SXM2 1469 aa34.2■■■■□ 3.07
ATP5D-204ENST00000589478 FBLN2P98095 1184 aa34.19■■■■□ 3.06
ATP5D-204ENST00000589478 GAPVD1Q14C86 1478 aa34.18■■■■□ 3.06
ATP5D-204ENST00000589478 MAGI1Q96QZ7 1491 aaPredicted RBP34.17■■■■□ 3.06
ATP5D-204ENST00000589478 PBRM1Q86U86 1689 aa34.15■■■■□ 3.06
ATP5D-204ENST00000589478 ABCA5Q8WWZ7 1642 aa34.13■■■■□ 3.05
ATP5D-204ENST00000589478 TRIM41Q8WV44 630 aa34.12■■■■□ 3.05
ATP5D-204ENST00000589478 CHMP7Q8WUX9 453 aaPredicted RBP34.05■■■■□ 3.04
ATP5D-204ENST00000589478 SYNJ2O15056 1496 aa34.03■■■■□ 3.04
ATP5D-204ENST00000589478 RIMBP3CA6NJZ7 1639 aa33.97■■■■□ 3.03
ATP5D-204ENST00000589478 RIMBP3BA6NNM3 1639 aa33.97■■■■□ 3.03
ATP5D-204ENST00000589478 RIMBP3Q9UFD9 1639 aa33.97■■■■□ 3.03
ATP5D-204ENST00000589478 ARHGEF11O15085 1522 aa33.94■■■■□ 3.02
ATP5D-204ENST00000589478 ADAMTS12P58397 1594 aa33.85■■■■□ 3.01
ATP5D-204ENST00000589478 ERICH3Q5RHP9 1530 aa33.84■■■■□ 3.01
ATP5D-204ENST00000589478 CLASP1Q7Z460 1538 aa33.84■■■■□ 3.01
ATP5D-204ENST00000589478 GRIN2AQ12879 1464 aa33.77■■■■□ 3
ATP5D-204ENST00000589478 FHAD1B1AJZ9 1412 aa33.77■■■■□ 3
ATP5D-204ENST00000589478 KIF27Q86VH2 1401 aa33.67■■■□□ 2.98
ATP5D-204ENST00000589478 CYB5RLQ6IPT4 315 aa33.63■■■□□ 2.97
ATP5D-204ENST00000589478 ARAP1Q96P48 1450 aa33.62■■■□□ 2.97
ATP5D-204ENST00000589478 NUP160Q12769 1436 aa33.61■■■□□ 2.97
ATP5D-204ENST00000589478 CEP170Q5SW79 1584 aa33.6■■■□□ 2.97
ATP5D-204ENST00000589478 CUL7Q14999 1698 aa33.52■■■□□ 2.96
ATP5D-204ENST00000589478 IGF1RP08069 1367 aa33.48■■■□□ 2.95
ATP5D-204ENST00000589478 SHROOM2Q13796 1616 aa33.4■■■□□ 2.94
ATP5D-204ENST00000589478 RUSC2Q8N2Y8 1516 aa33.35■■■□□ 2.93
ATP5D-204ENST00000589478 CARMIL1Q5VZK9 1371 aa33.33■■■□□ 2.93
ATP5D-204ENST00000589478 ERCC6L2Q5T890 1561 aa33.31■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms