RNA–Protein interactions for RNA: ENST00000429218.5

GGA1-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 5

Gene GGA1, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-210ENST00000429218 NISCHQ9Y2I1 1504 aa37.48■■■■□ 3.59
GGA1-210ENST00000429218 ABCC9O60706 1549 aa34.35■■■■□ 3.09
GGA1-210ENST00000429218 CCDC180Q9P1Z9 1646 aa33.96■■■■□ 3.03
GGA1-210ENST00000429218 DNAJC5BQ9UF47 199 aa32.61■■■□□ 2.81
GGA1-210ENST00000429218 RB1CC1Q8TDY2 1594 aa32.52■■■□□ 2.8
GGA1-210ENST00000429218 NACADO15069 1562 aa32.16■■■□□ 2.74
GGA1-210ENST00000429218 UNC13AQ9UPW8 1703 aa31.89■■■□□ 2.69
GGA1-210ENST00000429218 PABPN1Q86U42 306 aaKnown RBP eCLIP31.83■■■□□ 2.692e-10■□□□□ 10.4
GGA1-210ENST00000429218 DCAF8L2P0C7V8 631 aa31.75■■■□□ 2.67
GGA1-210ENST00000429218 BICRAQ9NZM4 1560 aa31.6■■■□□ 2.65
GGA1-210ENST00000429218 MYO15BQ96JP2 1530 aa31.54■■■□□ 2.64
GGA1-210ENST00000429218 SHROOM4Q9ULL8 1493 aa31.11■■■□□ 2.57
GGA1-210ENST00000429218 CC2D2AQ9P2K1 1620 aa31.06■■■□□ 2.56
GGA1-210ENST00000429218 CECR2Q9BXF3 1484 aa31■■■□□ 2.55
GGA1-210ENST00000429218 ZCCHC6Q5VYS8 1495 aaKnown RBP30.98■■■□□ 2.55
GGA1-210ENST00000429218 DCAF1Q9Y4B6 1507 aa30.94■■■□□ 2.54
GGA1-210ENST00000429218 SCRIBQ14160 1630 aa30.87■■■□□ 2.53
GGA1-210ENST00000429218 EIF4G1Q04637 1599 aaKnown RBP30.86■■■□□ 2.53
GGA1-210ENST00000429218 DNAJC5Q9H3Z4 198 aa30.33■■■□□ 2.45
GGA1-210ENST00000429218 CUX2O14529 1486 aa29.84■■■□□ 2.37
GGA1-210ENST00000429218 ERCC6Q03468 1493 aa29.71■■■□□ 2.35
GGA1-210ENST00000429218 NCAPD3P42695 1498 aa29.65■■■□□ 2.34
GGA1-210ENST00000429218 ATAD2BQ9ULI0 1458 aa29.49■■■□□ 2.31
GGA1-210ENST00000429218 HMGXB3Q12766 1538 aa29.45■■■□□ 2.3
GGA1-210ENST00000429218 SMARCA2P51531 1590 aa29.42■■■□□ 2.3
GGA1-210ENST00000429218 SMARCA4P51532 1647 aa29.4■■■□□ 2.3
GGA1-210ENST00000429218 NESP48681 1621 aa29.38■■■□□ 2.29
GGA1-210ENST00000429218 THOC2Q8NI27 1593 aaKnown RBP29.26■■■□□ 2.27
GGA1-210ENST00000429218 BAZ1BQ9UIG0 1483 aaKnown RBP29.2■■■□□ 2.26
GGA1-210ENST00000429218 BAZ1AQ9NRL2 1556 aaPredicted RBP29.15■■■□□ 2.26
GGA1-210ENST00000429218 LAMC3Q9Y6N6 1575 aa29.13■■■□□ 2.25
GGA1-210ENST00000429218 PEG3Q9GZU2 1588 aa29.11■■■□□ 2.25
GGA1-210ENST00000429218 KIF21AQ7Z4S6 1674 aa29.08■■■□□ 2.25
GGA1-210ENST00000429218 PDS5BQ9NTI5 1447 aa28.91■■■□□ 2.22
GGA1-210ENST00000429218 MROH2BQ7Z745 1585 aa28.88■■■□□ 2.21
GGA1-210ENST00000429218 TRIM41Q8WV44 630 aa28.8■■■□□ 2.2
GGA1-210ENST00000429218 MRC2Q9UBG0 1479 aa28.72■■■□□ 2.19
GGA1-210ENST00000429218 WDR62O43379 1518 aa28.7■■■□□ 2.19
GGA1-210ENST00000429218 CADPSQ9ULU8 1353 aa28.7■■■□□ 2.18
GGA1-210ENST00000429218 WIZO95785 1651 aa28.55■■■□□ 2.16
GGA1-210ENST00000429218 CEP164Q9UPV0 1460 aa28.52■■■□□ 2.16
GGA1-210ENST00000429218 FANCD2Q9BXW9 1451 aa28.42■■■□□ 2.14
GGA1-210ENST00000429218 CFTRP13569 1480 aa28.3■■■□□ 2.12
GGA1-210ENST00000429218 OSCARQ8IYS5 282 aa28.3■■■□□ 2.12
GGA1-210ENST00000429218 URB2Q14146 1524 aaKnown RBP28.23■■■□□ 2.11
GGA1-210ENST00000429218 TOP2AP11388 1531 aaKnown RBP28.14■■■□□ 2.1
GGA1-210ENST00000429218 PRDM2Q13029 1718 aa28.14■■■□□ 2.1
GGA1-210ENST00000429218 RIMBP3CA6NJZ7 1639 aa28.13■■■□□ 2.09
GGA1-210ENST00000429218 RIMBP3BA6NNM3 1639 aa28.13■■■□□ 2.09
GGA1-210ENST00000429218 RIMBP3Q9UFD9 1639 aa28.13■■■□□ 2.09
GGA1-210ENST00000429218 RSF1Q96T23 1441 aaPredicted RBP28.05■■■□□ 2.08
GGA1-210ENST00000429218 ZNF608Q9ULD9 1512 aaPredicted RBP27.96■■■□□ 2.07
GGA1-210ENST00000429218 ARHGEF11O15085 1522 aa27.95■■■□□ 2.06
GGA1-210ENST00000429218 IFT140Q96RY7 1462 aa27.95■■■□□ 2.06
GGA1-210ENST00000429218 EIF4G3O43432 1585 aaKnown RBP27.85■■■□□ 2.05
GGA1-210ENST00000429218 TOPBP1Q92547 1522 aa27.83■■■□□ 2.05
GGA1-210ENST00000429218 CCDC88BA6NC98 1476 aa27.77■■■□□ 2.04
GGA1-210ENST00000429218 CHD1O14646 1710 aa27.77■■■□□ 2.04
GGA1-210ENST00000429218 ABCC8Q09428 1581 aa27.73■■■□□ 2.03
GGA1-210ENST00000429218 DNMBPQ6XZF7 1577 aa27.72■■■□□ 2.03
GGA1-210ENST00000429218 CYB5RLQ6IPT4 315 aa27.68■■■□□ 2.02
GGA1-210ENST00000429218 TARBP1Q13395 1621 aaKnown RBP27.67■■■□□ 2.02
GGA1-210ENST00000429218 ARAP1Q96P48 1450 aa27.64■■■□□ 2.01
GGA1-210ENST00000429218 AQRO60306 1485 aaKnown RBP eCLIP27.61■■■□□ 2.012e-6■■□□□ 13.2
GGA1-210ENST00000429218 TRHP20396 242 aaPredicted RBP27.55■■■□□ 2
GGA1-210ENST00000429218 POLA1P09884 1462 aaPredicted RBP27.51■■■□□ 2
GGA1-210ENST00000429218 FBLN2P98095 1184 aa27.49■■□□□ 1.99
GGA1-210ENST00000429218 RAD54L2Q9Y4B4 1467 aa27.4■■□□□ 1.98
GGA1-210ENST00000429218 CLASP1Q7Z460 1538 aa27.38■■□□□ 1.97
GGA1-210ENST00000429218 WDR97A6NE52 1622 aa27.36■■□□□ 1.97
GGA1-210ENST00000429218 SNAPC4Q5SXM2 1469 aa27.36■■□□□ 1.97
GGA1-210ENST00000429218 TDRD9Q8NDG6 1382 aaKnown RBP27.34■■□□□ 1.97
GGA1-210ENST00000429218 SOGA1O94964 1423 aa27.33■■□□□ 1.97
GGA1-210ENST00000429218 SYNJ1O43426 1573 aa27.31■■□□□ 1.96
GGA1-210ENST00000429218 FGD5Q6ZNL6 1462 aa27.27■■□□□ 1.96
GGA1-210ENST00000429218 MAGI1Q96QZ7 1491 aaPredicted RBP27.26■■□□□ 1.95
GGA1-210ENST00000429218 CHMP7Q8WUX9 453 aaPredicted RBP27.2■■□□□ 1.94
GGA1-210ENST00000429218 GRIN2BQ13224 1484 aa27.19■■□□□ 1.94
GGA1-210ENST00000429218 CUX1P39880 1505 aa27.18■■□□□ 1.94
GGA1-210ENST00000429218 SYNJ2O15056 1496 aa27.17■■□□□ 1.94
GGA1-210ENST00000429218 PBRM1Q86U86 1689 aa27.17■■□□□ 1.94
GGA1-210ENST00000429218 AEBP2Q6ZN18 517 aaPredicted RBP27.13■■□□□ 1.93
GGA1-210ENST00000429218 GAPVD1Q14C86 1478 aa27.07■■□□□ 1.92
GGA1-210ENST00000429218 ABCA5Q8WWZ7 1642 aa26.99■■□□□ 1.91
GGA1-210ENST00000429218 ABCA10Q8WWZ4 1543 aa26.93■■□□□ 1.9
GGA1-210ENST00000429218 ERCC6L2Q5T890 1561 aa26.91■■□□□ 1.9
GGA1-210ENST00000429218 GRIN2AQ12879 1464 aa26.86■■□□□ 1.89
GGA1-210ENST00000429218 ADAMTS12P58397 1594 aa26.83■■□□□ 1.89
GGA1-210ENST00000429218 CEP170Q5SW79 1584 aa26.82■■□□□ 1.88
GGA1-210ENST00000429218 SHROOM2Q13796 1616 aa26.78■■□□□ 1.88
GGA1-210ENST00000429218 NUP160Q12769 1436 aa26.77■■□□□ 1.88
GGA1-210ENST00000429218 KIF13AQ9H1H9 1805 aa26.75■■□□□ 1.87
GGA1-210ENST00000429218 WRNQ14191 1432 aaPredicted RBP eCLIP26.68■■□□□ 1.86
GGA1-210ENST00000429218 BIVM-ERCC5R4GMW8 1640 aa26.66■■□□□ 1.86
GGA1-210ENST00000429218 FHAD1B1AJZ9 1412 aa26.65■■□□□ 1.86
GGA1-210ENST00000429218 TOP2BQ02880 1626 aa26.62■■□□□ 1.85
GGA1-210ENST00000429218 ERICH3Q5RHP9 1530 aa26.6■■□□□ 1.85
GGA1-210ENST00000429218 PRG4Q92954 1404 aaPredicted RBP26.53■■□□□ 1.84
GGA1-210ENST00000429218 RUSC2Q8N2Y8 1516 aa26.47■■□□□ 1.83
GGA1-210ENST00000429218 ABCC10Q5T3U5 1492 aa26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms