RNA–Protein interactions for RNA: ENST00000335181.9

PKM-202, Transcript of pyruvate kinase M1/2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKM, Length 2,318 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-202ENST00000335181 NISCHQ9Y2I1 1504 aa25.14■■□□□ 1.61
PKM-202ENST00000335181 CCDC180Q9P1Z9 1646 aa21.35■■□□□ 1.01
PKM-202ENST00000335181 SHROOM4Q9ULL8 1493 aa21.34■■□□□ 1.01
PKM-202ENST00000335181 ZCCHC6Q5VYS8 1495 aaKnown RBP21.32■■□□□ 1
PKM-202ENST00000335181 SUPT5HO00267 1087 aaKnown RBP21■□□□□ 0.95
PKM-202ENST00000335181 DCAF1Q9Y4B6 1507 aa20.72■□□□□ 0.91
PKM-202ENST00000335181 CHIC1Q5VXU3 224 aa20.61■□□□□ 0.89
PKM-202ENST00000335181 MYO15BQ96JP2 1530 aa20.57■□□□□ 0.88
PKM-202ENST00000335181 DCAF8L2P0C7V8 631 aa20.54■□□□□ 0.88
PKM-202ENST00000335181 HRCP23327 699 aa20.26■□□□□ 0.83
PKM-202ENST00000335181 ABCC9O60706 1549 aa20.14■□□□□ 0.81
PKM-202ENST00000335181 PCGF6Q9BYE7 350 aa20.04■□□□□ 0.8
PKM-202ENST00000335181 RSF1Q96T23 1441 aaPredicted RBP19.93■□□□□ 0.78
PKM-202ENST00000335181 LOC105371045A0A1W2PR82 267 aa19.92■□□□□ 0.78
PKM-202ENST00000335181 SCRIBQ14160 1630 aa19.9■□□□□ 0.78
PKM-202ENST00000335181 RB1CC1Q8TDY2 1594 aa19.77■□□□□ 0.76
PKM-202ENST00000335181 TRIM26Q12899 539 aaPredicted RBP19.73■□□□□ 0.75
PKM-202ENST00000335181 NACADO15069 1562 aa19.69■□□□□ 0.74
PKM-202ENST00000335181 PPARGC1BQ86YN6 1023 aaKnown RBP19.69■□□□□ 0.74
PKM-202ENST00000335181 TRIM41Q8WV44 630 aa19.62■□□□□ 0.73
PKM-202ENST00000335181 CECR2Q9BXF3 1484 aa19.53■□□□□ 0.72
PKM-202ENST00000335181 MROH2BQ7Z745 1585 aa19.51■□□□□ 0.71
PKM-202ENST00000335181 ZEB1P37275 1124 aaPredicted RBP19.4■□□□□ 0.7
PKM-202ENST00000335181 WIZO95785 1651 aa19.4■□□□□ 0.7
PKM-202ENST00000335181 BAZ1AQ9NRL2 1556 aaPredicted RBP19.36■□□□□ 0.69
PKM-202ENST00000335181 FAM9AQ8IZU1 332 aaPredicted RBP19.36■□□□□ 0.69
PKM-202ENST00000335181 EIF4G1Q04637 1599 aaKnown RBP19.31■□□□□ 0.68
PKM-202ENST00000335181 TOP2AP11388 1531 aaKnown RBP19.16■□□□□ 0.66
PKM-202ENST00000335181 SMARCA4P51532 1647 aa19.1■□□□□ 0.65
PKM-202ENST00000335181 EHMT2Q96KQ7 1210 aa19.1■□□□□ 0.65
PKM-202ENST00000335181 CCDC88BA6NC98 1476 aa19.05■□□□□ 0.64
PKM-202ENST00000335181 SMARCA2P51531 1590 aa19.04■□□□□ 0.64
PKM-202ENST00000335181 UNC13AQ9UPW8 1703 aa19■□□□□ 0.63
PKM-202ENST00000335181 ABCC8Q09428 1581 aa18.99■□□□□ 0.63
PKM-202ENST00000335181 WRNQ14191 1432 aaPredicted RBP eCLIP18.98■□□□□ 0.631e-7■■■■□ 20.9
PKM-202ENST00000335181 EEA1Q15075 1411 aa18.9■□□□□ 0.62
PKM-202ENST00000335181 TNIKQ9UKE5 1360 aa18.88■□□□□ 0.61
PKM-202ENST00000335181 CEP162Q5TB80 1403 aa18.87■□□□□ 0.61
PKM-202ENST00000335181 SOGA1O94964 1423 aa18.86■□□□□ 0.61
PKM-202ENST00000335181 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.81■□□□□ 0.6
PKM-202ENST00000335181 PEG3Q9GZU2 1588 aa18.81■□□□□ 0.6
PKM-202ENST00000335181 CCER1Q8TC90 406 aaPredicted RBP18.79■□□□□ 0.6
PKM-202ENST00000335181 BICRAQ9NZM4 1560 aa18.78■□□□□ 0.6
PKM-202ENST00000335181 CSRNP3Q8WYN3 585 aa18.78■□□□□ 0.6
PKM-202ENST00000335181 RUSC2Q8N2Y8 1516 aa18.74■□□□□ 0.59
PKM-202ENST00000335181 GOLGA3Q08378 1498 aa18.72■□□□□ 0.59
PKM-202ENST00000335181 SCAF1Q9H7N4 1312 aaKnown RBP18.71■□□□□ 0.59
PKM-202ENST00000335181 UBTFP17480 764 aaKnown RBP18.63■□□□□ 0.57
PKM-202ENST00000335181 KIF21BO75037 1637 aa18.63■□□□□ 0.57
PKM-202ENST00000335181 PABPN1Q86U42 306 aaKnown RBP eCLIP18.61■□□□□ 0.573e-11■□□□□ 10.4
PKM-202ENST00000335181 SYNJ1O43426 1573 aa18.61■□□□□ 0.57
PKM-202ENST00000335181 CEP164Q9UPV0 1460 aa18.61■□□□□ 0.57
PKM-202ENST00000335181 PELP1Q8IZL8 1130 aaKnown RBP18.6■□□□□ 0.57
PKM-202ENST00000335181 ATAD2BQ9ULI0 1458 aa18.57■□□□□ 0.56
PKM-202ENST00000335181 TTBK1Q5TCY1 1321 aaPredicted RBP18.55■□□□□ 0.56
PKM-202ENST00000335181 DIEXFQ68CQ4 756 aaKnown RBP18.54■□□□□ 0.56
PKM-202ENST00000335181 ACIN1Q9UKV3 1341 aaKnown RBP18.52■□□□□ 0.56
PKM-202ENST00000335181 BAZ1BQ9UIG0 1483 aaKnown RBP18.52■□□□□ 0.55
PKM-202ENST00000335181 CLIP1P30622 1438 aa18.48■□□□□ 0.55
PKM-202ENST00000335181 VPS8Q8N3P4 1428 aa18.46■□□□□ 0.55
PKM-202ENST00000335181 NEUROD1Q13562 356 aa18.44■□□□□ 0.54
PKM-202ENST00000335181 TOP2BQ02880 1626 aa18.41■□□□□ 0.54
PKM-202ENST00000335181 RAPGEF2Q9Y4G8 1499 aa18.41■□□□□ 0.54
PKM-202ENST00000335181 ZNF316A6NFI3 1004 aaPredicted RBP18.4■□□□□ 0.54
PKM-202ENST00000335181 CENPBP07199 599 aaPredicted RBP18.38■□□□□ 0.53
PKM-202ENST00000335181 BIVM-ERCC5R4GMW8 1640 aa18.36■□□□□ 0.53
PKM-202ENST00000335181 ERICH3Q5RHP9 1530 aa18.31■□□□□ 0.52
PKM-202ENST00000335181 HNRNPUL2Q1KMD3 747 aaKnown RBP18.29■□□□□ 0.52
PKM-202ENST00000335181 PRXQ9BXM0 1461 aa18.28■□□□□ 0.52
PKM-202ENST00000335181 APLP2Q06481 763 aa18.27■□□□□ 0.51
PKM-202ENST00000335181 GTF3C3Q9Y5Q9 886 aa18.25■□□□□ 0.51
PKM-202ENST00000335181 HMGXB3Q12766 1538 aa18.24■□□□□ 0.51
PKM-202ENST00000335181 NCAPD3P42695 1498 aa18.22■□□□□ 0.51
PKM-202ENST00000335181 ARAP1Q96P48 1450 aa18.2■□□□□ 0.5
PKM-202ENST00000335181 CUX1P39880 1505 aa18.17■□□□□ 0.5
PKM-202ENST00000335181 CLSPNQ9HAW4 1339 aa18.16■□□□□ 0.5
PKM-202ENST00000335181 KIF27Q86VH2 1401 aa18.12■□□□□ 0.49
PKM-202ENST00000335181 MIER1Q8N108 512 aa18.11■□□□□ 0.49
PKM-202ENST00000335181 RANGAP1P46060 587 aaPredicted RBP18.1■□□□□ 0.49
PKM-202ENST00000335181 CFTRP13569 1480 aa18.1■□□□□ 0.49
PKM-202ENST00000335181 DHX57Q6P158 1386 aaKnown RBP18.09■□□□□ 0.49
PKM-202ENST00000335181 RRBP1Q9P2E9 1410 aaKnown RBP18.08■□□□□ 0.49
PKM-202ENST00000335181 KANK4Q5T7N3 995 aaPredicted RBP18.05■□□□□ 0.48
PKM-202ENST00000335181 CUX2O14529 1486 aa18.04■□□□□ 0.48
PKM-202ENST00000335181 ARHGAP35Q9NRY4 1499 aa18.01■□□□□ 0.47
PKM-202ENST00000335181 YTHDC1Q96MU7 727 aaKnown RBP18■□□□□ 0.47
PKM-202ENST00000335181 PRDM2Q13029 1718 aa17.98■□□□□ 0.47
PKM-202ENST00000335181 CCNB3Q8WWL7 1395 aa17.94■□□□□ 0.46
PKM-202ENST00000335181 MAP3K1Q13233 1512 aa17.93■□□□□ 0.46
PKM-202ENST00000335181 IGF1RP08069 1367 aa17.91■□□□□ 0.46
PKM-202ENST00000335181 TIAM1Q13009 1591 aa17.86■□□□□ 0.45
PKM-202ENST00000335181 CADPSQ9ULU8 1353 aa17.84■□□□□ 0.45
PKM-202ENST00000335181 CARMIL1Q5VZK9 1371 aa17.81■□□□□ 0.44
PKM-202ENST00000335181 FGD5Q6ZNL6 1462 aa17.8■□□□□ 0.44
PKM-202ENST00000335181 LRRC9Q6ZRR7 1453 aa17.78■□□□□ 0.44
PKM-202ENST00000335181 RAB3GAP2Q9H2M9 1393 aa17.78■□□□□ 0.44
PKM-202ENST00000335181 MAPKBP1O60336 1514 aa17.78■□□□□ 0.44
PKM-202ENST00000335181 FHAD1B1AJZ9 1412 aa17.74■□□□□ 0.43
PKM-202ENST00000335181 CFAP43Q8NDM7 1665 aa17.74■□□□□ 0.43
PKM-202ENST00000335181 SETD5Q9C0A6 1442 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms