RNA–Protein interactions for RNA: ENST00000423024.1

GGA1-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 3

Gene GGA1, Length 559 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-209ENST00000423024 NISCHQ9Y2I1 1504 aa16.91■□□□□ 0.3
GGA1-209ENST00000423024 ABCC9O60706 1549 aa16.07■□□□□ 0.16
GGA1-209ENST00000423024 CCDC180Q9P1Z9 1646 aa15.5■□□□□ 0.07
GGA1-209ENST00000423024 DNAJC5BQ9UF47 199 aa15.49■□□□□ 0.07
GGA1-209ENST00000423024 RB1CC1Q8TDY2 1594 aa15.06■□□□□ 0
GGA1-209ENST00000423024 PABPN1Q86U42 306 aaKnown RBP eCLIP14.84□□□□□ -0.032e-10■□□□□ 10.4
GGA1-209ENST00000423024 NACADO15069 1562 aa14.78□□□□□ -0.04
GGA1-209ENST00000423024 DNAJC5Q9H3Z4 198 aa14.73□□□□□ -0.05
GGA1-209ENST00000423024 UNC13AQ9UPW8 1703 aa14.71□□□□□ -0.05
GGA1-209ENST00000423024 DCAF8L2P0C7V8 631 aa14.62□□□□□ -0.07
GGA1-209ENST00000423024 BICRAQ9NZM4 1560 aa14.56□□□□□ -0.08
GGA1-209ENST00000423024 CECR2Q9BXF3 1484 aa14.54□□□□□ -0.08
GGA1-209ENST00000423024 CC2D2AQ9P2K1 1620 aa14.49□□□□□ -0.09
GGA1-209ENST00000423024 SHROOM4Q9ULL8 1493 aa14.37□□□□□ -0.11
GGA1-209ENST00000423024 MYO15BQ96JP2 1530 aa14.33□□□□□ -0.12
GGA1-209ENST00000423024 EIF4G1Q04637 1599 aaKnown RBP14.3□□□□□ -0.12
GGA1-209ENST00000423024 CUX2O14529 1486 aa14.12□□□□□ -0.15
GGA1-209ENST00000423024 SCRIBQ14160 1630 aa14.1□□□□□ -0.15
GGA1-209ENST00000423024 ERCC6Q03468 1493 aa13.99□□□□□ -0.17
GGA1-209ENST00000423024 TRIM41Q8WV44 630 aa13.93□□□□□ -0.18
GGA1-209ENST00000423024 DCAF1Q9Y4B6 1507 aa13.93□□□□□ -0.18
GGA1-209ENST00000423024 ZCCHC6Q5VYS8 1495 aaKnown RBP13.89□□□□□ -0.19
GGA1-209ENST00000423024 THOC2Q8NI27 1593 aaKnown RBP13.61□□□□□ -0.23
GGA1-209ENST00000423024 NESP48681 1621 aa13.6□□□□□ -0.23
GGA1-209ENST00000423024 NCAPD3P42695 1498 aa13.6□□□□□ -0.23
GGA1-209ENST00000423024 SMARCA2P51531 1590 aa13.54□□□□□ -0.24
GGA1-209ENST00000423024 HMGXB3Q12766 1538 aa13.49□□□□□ -0.25
GGA1-209ENST00000423024 ATAD2BQ9ULI0 1458 aa13.49□□□□□ -0.25
GGA1-209ENST00000423024 KIF21AQ7Z4S6 1674 aa13.47□□□□□ -0.25
GGA1-209ENST00000423024 LAMC3Q9Y6N6 1575 aa13.45□□□□□ -0.26
GGA1-209ENST00000423024 BAZ1AQ9NRL2 1556 aaPredicted RBP13.42□□□□□ -0.26
GGA1-209ENST00000423024 PDS5BQ9NTI5 1447 aa13.4□□□□□ -0.26
GGA1-209ENST00000423024 BAZ1BQ9UIG0 1483 aaKnown RBP13.38□□□□□ -0.27
GGA1-209ENST00000423024 SMARCA4P51532 1647 aa13.36□□□□□ -0.27
GGA1-209ENST00000423024 OSCARQ8IYS5 282 aa13.35□□□□□ -0.27
GGA1-209ENST00000423024 MRC2Q9UBG0 1479 aa13.31□□□□□ -0.28
GGA1-209ENST00000423024 AEBP2Q6ZN18 517 aaPredicted RBP13.3□□□□□ -0.28
GGA1-209ENST00000423024 WDR62O43379 1518 aa13.29□□□□□ -0.28
GGA1-209ENST00000423024 RIMBP3CA6NJZ7 1639 aa13.27□□□□□ -0.29
GGA1-209ENST00000423024 RIMBP3BA6NNM3 1639 aa13.27□□□□□ -0.29
GGA1-209ENST00000423024 RIMBP3Q9UFD9 1639 aa13.27□□□□□ -0.29
GGA1-209ENST00000423024 TRHP20396 242 aaPredicted RBP13.2□□□□□ -0.3
GGA1-209ENST00000423024 PEG3Q9GZU2 1588 aa13.2□□□□□ -0.3
GGA1-209ENST00000423024 CADPSQ9ULU8 1353 aa13.19□□□□□ -0.3
GGA1-209ENST00000423024 CEP164Q9UPV0 1460 aa13.16□□□□□ -0.3
GGA1-209ENST00000423024 ARHGEF11O15085 1522 aa13.14□□□□□ -0.31
GGA1-209ENST00000423024 CYB5RLQ6IPT4 315 aa13.09□□□□□ -0.31
GGA1-209ENST00000423024 FANCD2Q9BXW9 1451 aa13.06□□□□□ -0.32
GGA1-209ENST00000423024 MROH2BQ7Z745 1585 aa13.02□□□□□ -0.33
GGA1-209ENST00000423024 URB2Q14146 1524 aaKnown RBP12.96□□□□□ -0.33
GGA1-209ENST00000423024 ARAP1Q96P48 1450 aa12.96□□□□□ -0.34
GGA1-209ENST00000423024 ZNF608Q9ULD9 1512 aaPredicted RBP12.9□□□□□ -0.34
GGA1-209ENST00000423024 CFTRP13569 1480 aa12.9□□□□□ -0.34
GGA1-209ENST00000423024 IFT140Q96RY7 1462 aa12.9□□□□□ -0.34
GGA1-209ENST00000423024 CHD1O14646 1710 aa12.89□□□□□ -0.35
GGA1-209ENST00000423024 WIZO95785 1651 aa12.87□□□□□ -0.35
GGA1-209ENST00000423024 RSF1Q96T23 1441 aaPredicted RBP12.87□□□□□ -0.35
GGA1-209ENST00000423024 EIF4G3O43432 1585 aaKnown RBP12.86□□□□□ -0.35
GGA1-209ENST00000423024 FBLN2P98095 1184 aa12.83□□□□□ -0.36
GGA1-209ENST00000423024 PRDM2Q13029 1718 aa12.82□□□□□ -0.36
GGA1-209ENST00000423024 TOPBP1Q92547 1522 aa12.73□□□□□ -0.37
GGA1-209ENST00000423024 ILDR1Q86SU0 546 aaPredicted RBP12.73□□□□□ -0.37
GGA1-209ENST00000423024 AQRO60306 1485 aaKnown RBP eCLIP12.72□□□□□ -0.372e-6■■□□□ 13.2
GGA1-209ENST00000423024 ABCC8Q09428 1581 aa12.7□□□□□ -0.38
GGA1-209ENST00000423024 SYNJ1O43426 1573 aa12.67□□□□□ -0.38
GGA1-209ENST00000423024 TOP2AP11388 1531 aaKnown RBP12.67□□□□□ -0.38
GGA1-209ENST00000423024 CLASP1Q7Z460 1538 aa12.67□□□□□ -0.38
GGA1-209ENST00000423024 DNMBPQ6XZF7 1577 aa12.66□□□□□ -0.38
GGA1-209ENST00000423024 TARBP1Q13395 1621 aaKnown RBP12.66□□□□□ -0.38
GGA1-209ENST00000423024 GAPVD1Q14C86 1478 aa12.61□□□□□ -0.39
GGA1-209ENST00000423024 CHMP7Q8WUX9 453 aaPredicted RBP12.61□□□□□ -0.39
GGA1-209ENST00000423024 SNAPC4Q5SXM2 1469 aa12.6□□□□□ -0.39
GGA1-209ENST00000423024 POLA1P09884 1462 aaPredicted RBP12.56□□□□□ -0.4
GGA1-209ENST00000423024 TDRD9Q8NDG6 1382 aaKnown RBP12.55□□□□□ -0.4
GGA1-209ENST00000423024 MAGI1Q96QZ7 1491 aaPredicted RBP12.54□□□□□ -0.4
GGA1-209ENST00000423024 WDR97A6NE52 1622 aa12.54□□□□□ -0.4
GGA1-209ENST00000423024 RAD54L2Q9Y4B4 1467 aa12.52□□□□□ -0.41
GGA1-209ENST00000423024 KIF13AQ9H1H9 1805 aa12.51□□□□□ -0.41
GGA1-209ENST00000423024 SYNJ2O15056 1496 aa12.51□□□□□ -0.41
GGA1-209ENST00000423024 SOGA1O94964 1423 aa12.5□□□□□ -0.41
GGA1-209ENST00000423024 CCDC88BA6NC98 1476 aa12.5□□□□□ -0.41
GGA1-209ENST00000423024 GRIN2BQ13224 1484 aa12.48□□□□□ -0.41
GGA1-209ENST00000423024 KDM4FA0A1W2PPD8 638 aa12.44□□□□□ -0.42
GGA1-209ENST00000423024 PBRM1Q86U86 1689 aa12.44□□□□□ -0.42
GGA1-209ENST00000423024 KDM6BO15054 1643 aa12.4□□□□□ -0.42
GGA1-209ENST00000423024 FGD5Q6ZNL6 1462 aa12.4□□□□□ -0.42
GGA1-209ENST00000423024 ERCC6L2Q5T890 1561 aa12.4□□□□□ -0.42
GGA1-209ENST00000423024 FAM69CQ0P6D2 419 aa12.37□□□□□ -0.43
GGA1-209ENST00000423024 CEP170Q5SW79 1584 aa12.37□□□□□ -0.43
GGA1-209ENST00000423024 ABCC10Q5T3U5 1492 aa12.33□□□□□ -0.44
GGA1-209ENST00000423024 TSPOAP1O95153 1857 aa12.32□□□□□ -0.44
GGA1-209ENST00000423024 NPM1P06748 294 aaKnown RBP eCLIP12.32□□□□□ -0.44
GGA1-209ENST00000423024 GRIN2AQ12879 1464 aa12.31□□□□□ -0.44
GGA1-209ENST00000423024 HECW2Q9P2P5 1572 aa12.3□□□□□ -0.44
GGA1-209ENST00000423024 DIP2BQ9P265 1576 aa12.3□□□□□ -0.44
GGA1-209ENST00000423024 SHROOM2Q13796 1616 aa12.29□□□□□ -0.44
GGA1-209ENST00000423024 CUX1P39880 1505 aa12.28□□□□□ -0.44
GGA1-209ENST00000423024 MAPKBP1O60336 1514 aa12.27□□□□□ -0.44
GGA1-209ENST00000423024 ABCA5Q8WWZ7 1642 aa12.27□□□□□ -0.44
GGA1-209ENST00000423024 ADGRL1O94910 1474 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms