RNA–Protein interactions for RNA: ENST00000423024.1

GGA1-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 3

Gene GGA1, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-209ENST00000423024 NISCHQ9Y2I1 1504 aa16.91■□□□□ 0.3
GGA1-209ENST00000423024 ABCC9O60706 1549 aa16.07■□□□□ 0.16
GGA1-209ENST00000423024 CCDC180Q9P1Z9 1646 aa15.5■□□□□ 0.07
GGA1-209ENST00000423024 DNAJC5BQ9UF47 199 aa15.49■□□□□ 0.07
GGA1-209ENST00000423024 RB1CC1Q8TDY2 1594 aa15.06■□□□□ 0
GGA1-209ENST00000423024 PABPN1Q86U42 306 aaKnown RBP eCLIP14.84□□□□□ -0.032e-10■□□□□ 10.4
GGA1-209ENST00000423024 NACADO15069 1562 aa14.78□□□□□ -0.04
GGA1-209ENST00000423024 DNAJC5Q9H3Z4 198 aa14.73□□□□□ -0.05
GGA1-209ENST00000423024 UNC13AQ9UPW8 1703 aa14.71□□□□□ -0.05
GGA1-209ENST00000423024 DCAF8L2P0C7V8 631 aa14.62□□□□□ -0.07
GGA1-209ENST00000423024 BICRAQ9NZM4 1560 aa14.56□□□□□ -0.08
GGA1-209ENST00000423024 CECR2Q9BXF3 1484 aa14.54□□□□□ -0.08
GGA1-209ENST00000423024 CC2D2AQ9P2K1 1620 aa14.49□□□□□ -0.09
GGA1-209ENST00000423024 SHROOM4Q9ULL8 1493 aa14.37□□□□□ -0.11
GGA1-209ENST00000423024 MYO15BQ96JP2 1530 aa14.33□□□□□ -0.12
GGA1-209ENST00000423024 EIF4G1Q04637 1599 aaKnown RBP14.3□□□□□ -0.12
GGA1-209ENST00000423024 CUX2O14529 1486 aa14.12□□□□□ -0.15
GGA1-209ENST00000423024 SCRIBQ14160 1630 aa14.1□□□□□ -0.15
GGA1-209ENST00000423024 ERCC6Q03468 1493 aa13.99□□□□□ -0.17
GGA1-209ENST00000423024 TRIM41Q8WV44 630 aa13.93□□□□□ -0.18
GGA1-209ENST00000423024 DCAF1Q9Y4B6 1507 aa13.93□□□□□ -0.18
GGA1-209ENST00000423024 ZCCHC6Q5VYS8 1495 aaKnown RBP13.89□□□□□ -0.19
GGA1-209ENST00000423024 THOC2Q8NI27 1593 aaKnown RBP13.61□□□□□ -0.23
GGA1-209ENST00000423024 NESP48681 1621 aa13.6□□□□□ -0.23
GGA1-209ENST00000423024 NCAPD3P42695 1498 aa13.6□□□□□ -0.23
GGA1-209ENST00000423024 SMARCA2P51531 1590 aa13.54□□□□□ -0.24
GGA1-209ENST00000423024 HMGXB3Q12766 1538 aa13.49□□□□□ -0.25
GGA1-209ENST00000423024 ATAD2BQ9ULI0 1458 aa13.49□□□□□ -0.25
GGA1-209ENST00000423024 KIF21AQ7Z4S6 1674 aa13.47□□□□□ -0.25
GGA1-209ENST00000423024 LAMC3Q9Y6N6 1575 aa13.45□□□□□ -0.26
GGA1-209ENST00000423024 BAZ1AQ9NRL2 1556 aaPredicted RBP13.42□□□□□ -0.26
GGA1-209ENST00000423024 PDS5BQ9NTI5 1447 aa13.4□□□□□ -0.26
GGA1-209ENST00000423024 BAZ1BQ9UIG0 1483 aaKnown RBP13.38□□□□□ -0.27
GGA1-209ENST00000423024 SMARCA4P51532 1647 aa13.36□□□□□ -0.27
GGA1-209ENST00000423024 OSCARQ8IYS5 282 aa13.35□□□□□ -0.27
GGA1-209ENST00000423024 MRC2Q9UBG0 1479 aa13.31□□□□□ -0.28
GGA1-209ENST00000423024 AEBP2Q6ZN18 517 aaPredicted RBP13.3□□□□□ -0.28
GGA1-209ENST00000423024 WDR62O43379 1518 aa13.29□□□□□ -0.28
GGA1-209ENST00000423024 RIMBP3CA6NJZ7 1639 aa13.27□□□□□ -0.29
GGA1-209ENST00000423024 RIMBP3BA6NNM3 1639 aa13.27□□□□□ -0.29
GGA1-209ENST00000423024 RIMBP3Q9UFD9 1639 aa13.27□□□□□ -0.29
GGA1-209ENST00000423024 TRHP20396 242 aaPredicted RBP13.2□□□□□ -0.3
GGA1-209ENST00000423024 PEG3Q9GZU2 1588 aa13.2□□□□□ -0.3
GGA1-209ENST00000423024 CADPSQ9ULU8 1353 aa13.19□□□□□ -0.3
GGA1-209ENST00000423024 CEP164Q9UPV0 1460 aa13.16□□□□□ -0.3
GGA1-209ENST00000423024 ARHGEF11O15085 1522 aa13.14□□□□□ -0.31
GGA1-209ENST00000423024 CYB5RLQ6IPT4 315 aa13.09□□□□□ -0.31
GGA1-209ENST00000423024 FANCD2Q9BXW9 1451 aa13.06□□□□□ -0.32
GGA1-209ENST00000423024 MROH2BQ7Z745 1585 aa13.02□□□□□ -0.33
GGA1-209ENST00000423024 URB2Q14146 1524 aaKnown RBP12.96□□□□□ -0.33
GGA1-209ENST00000423024 ARAP1Q96P48 1450 aa12.96□□□□□ -0.34
GGA1-209ENST00000423024 ZNF608Q9ULD9 1512 aaPredicted RBP12.9□□□□□ -0.34
GGA1-209ENST00000423024 CFTRP13569 1480 aa12.9□□□□□ -0.34
GGA1-209ENST00000423024 IFT140Q96RY7 1462 aa12.9□□□□□ -0.34
GGA1-209ENST00000423024 CHD1O14646 1710 aa12.89□□□□□ -0.35
GGA1-209ENST00000423024 WIZO95785 1651 aa12.87□□□□□ -0.35
GGA1-209ENST00000423024 RSF1Q96T23 1441 aaPredicted RBP12.87□□□□□ -0.35
GGA1-209ENST00000423024 EIF4G3O43432 1585 aaKnown RBP12.86□□□□□ -0.35
GGA1-209ENST00000423024 FBLN2P98095 1184 aa12.83□□□□□ -0.36
GGA1-209ENST00000423024 PRDM2Q13029 1718 aa12.82□□□□□ -0.36
GGA1-209ENST00000423024 TOPBP1Q92547 1522 aa12.73□□□□□ -0.37
GGA1-209ENST00000423024 ILDR1Q86SU0 546 aaPredicted RBP12.73□□□□□ -0.37
GGA1-209ENST00000423024 AQRO60306 1485 aaKnown RBP eCLIP12.72□□□□□ -0.372e-6■■□□□ 13.2
GGA1-209ENST00000423024 ABCC8Q09428 1581 aa12.7□□□□□ -0.38
GGA1-209ENST00000423024 SYNJ1O43426 1573 aa12.67□□□□□ -0.38
GGA1-209ENST00000423024 TOP2AP11388 1531 aaKnown RBP12.67□□□□□ -0.38
GGA1-209ENST00000423024 CLASP1Q7Z460 1538 aa12.67□□□□□ -0.38
GGA1-209ENST00000423024 DNMBPQ6XZF7 1577 aa12.66□□□□□ -0.38
GGA1-209ENST00000423024 TARBP1Q13395 1621 aaKnown RBP12.66□□□□□ -0.38
GGA1-209ENST00000423024 GAPVD1Q14C86 1478 aa12.61□□□□□ -0.39
GGA1-209ENST00000423024 CHMP7Q8WUX9 453 aaPredicted RBP12.61□□□□□ -0.39
GGA1-209ENST00000423024 SNAPC4Q5SXM2 1469 aa12.6□□□□□ -0.39
GGA1-209ENST00000423024 POLA1P09884 1462 aaPredicted RBP12.56□□□□□ -0.4
GGA1-209ENST00000423024 TDRD9Q8NDG6 1382 aaKnown RBP12.55□□□□□ -0.4
GGA1-209ENST00000423024 MAGI1Q96QZ7 1491 aaPredicted RBP12.54□□□□□ -0.4
GGA1-209ENST00000423024 WDR97A6NE52 1622 aa12.54□□□□□ -0.4
GGA1-209ENST00000423024 RAD54L2Q9Y4B4 1467 aa12.52□□□□□ -0.41
GGA1-209ENST00000423024 KIF13AQ9H1H9 1805 aa12.51□□□□□ -0.41
GGA1-209ENST00000423024 SYNJ2O15056 1496 aa12.51□□□□□ -0.41
GGA1-209ENST00000423024 SOGA1O94964 1423 aa12.5□□□□□ -0.41
GGA1-209ENST00000423024 CCDC88BA6NC98 1476 aa12.5□□□□□ -0.41
GGA1-209ENST00000423024 GRIN2BQ13224 1484 aa12.48□□□□□ -0.41
GGA1-209ENST00000423024 KDM4FA0A1W2PPD8 638 aa12.44□□□□□ -0.42
GGA1-209ENST00000423024 PBRM1Q86U86 1689 aa12.44□□□□□ -0.42
GGA1-209ENST00000423024 KDM6BO15054 1643 aa12.4□□□□□ -0.42
GGA1-209ENST00000423024 FGD5Q6ZNL6 1462 aa12.4□□□□□ -0.42
GGA1-209ENST00000423024 ERCC6L2Q5T890 1561 aa12.4□□□□□ -0.42
GGA1-209ENST00000423024 FAM69CQ0P6D2 419 aa12.37□□□□□ -0.43
GGA1-209ENST00000423024 CEP170Q5SW79 1584 aa12.37□□□□□ -0.43
GGA1-209ENST00000423024 ABCC10Q5T3U5 1492 aa12.33□□□□□ -0.44
GGA1-209ENST00000423024 TSPOAP1O95153 1857 aa12.32□□□□□ -0.44
GGA1-209ENST00000423024 NPM1P06748 294 aaKnown RBP eCLIP12.32□□□□□ -0.44
GGA1-209ENST00000423024 GRIN2AQ12879 1464 aa12.31□□□□□ -0.44
GGA1-209ENST00000423024 HECW2Q9P2P5 1572 aa12.3□□□□□ -0.44
GGA1-209ENST00000423024 DIP2BQ9P265 1576 aa12.3□□□□□ -0.44
GGA1-209ENST00000423024 SHROOM2Q13796 1616 aa12.29□□□□□ -0.44
GGA1-209ENST00000423024 CUX1P39880 1505 aa12.28□□□□□ -0.44
GGA1-209ENST00000423024 MAPKBP1O60336 1514 aa12.27□□□□□ -0.44
GGA1-209ENST00000423024 ABCA5Q8WWZ7 1642 aa12.27□□□□□ -0.44
GGA1-209ENST00000423024 ADGRL1O94910 1474 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms