RNA–Protein interactions for RNA: ENST00000495826.5

DGCR8-209, Transcript of DGCR8, microprocessor complex subunit, humanhuman

TSL 1 (best)

Gene DGCR8, Length 4,695 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DGCR8-209ENST00000495826 NISCHQ9Y2I1 1504 aa26.33■■□□□ 1.81
DGCR8-209ENST00000495826 SUPT5HO00267 1087 aaKnown RBP23.5■■□□□ 1.35
DGCR8-209ENST00000495826 SHROOM4Q9ULL8 1493 aa23.46■■□□□ 1.35
DGCR8-209ENST00000495826 DCAF8L2P0C7V8 631 aa23.42■■□□□ 1.34
DGCR8-209ENST00000495826 PCGF6Q9BYE7 350 aa22.45■■□□□ 1.18
DGCR8-209ENST00000495826 CHIC1Q5VXU3 224 aa22.33■■□□□ 1.17
DGCR8-209ENST00000495826 HRCP23327 699 aa22.31■■□□□ 1.16
DGCR8-209ENST00000495826 ZCCHC6Q5VYS8 1495 aaKnown RBP22.17■■□□□ 1.14
DGCR8-209ENST00000495826 ZEB1P37275 1124 aaPredicted RBP22.09■■□□□ 1.13
DGCR8-209ENST00000495826 CCDC180Q9P1Z9 1646 aa22.02■■□□□ 1.12
DGCR8-209ENST00000495826 TRIM26Q12899 539 aaPredicted RBP21.94■■□□□ 1.1
DGCR8-209ENST00000495826 TRIM41Q8WV44 630 aa21.94■■□□□ 1.1
DGCR8-209ENST00000495826 FAM9AQ8IZU1 332 aaPredicted RBP21.82■■□□□ 1.08
DGCR8-209ENST00000495826 LOC105371045A0A1W2PR82 267 aa21.77■■□□□ 1.08
DGCR8-209ENST00000495826 EHMT2Q96KQ7 1210 aa21.76■■□□□ 1.07
DGCR8-209ENST00000495826 DCAF1Q9Y4B6 1507 aa21.62■■□□□ 1.05
DGCR8-209ENST00000495826 PELP1Q8IZL8 1130 aaKnown RBP21.59■■□□□ 1.05
DGCR8-209ENST00000495826 PPARGC1BQ86YN6 1023 aaKnown RBP21.58■■□□□ 1.05
DGCR8-209ENST00000495826 MYO15BQ96JP2 1530 aa21.52■■□□□ 1.04
DGCR8-209ENST00000495826 CCER1Q8TC90 406 aaPredicted RBP21.43■■□□□ 1.02
DGCR8-209ENST00000495826 CENPBP07199 599 aaPredicted RBP21.36■■□□□ 1.01
DGCR8-209ENST00000495826 APLP2Q06481 763 aa21.29■■□□□ 1
DGCR8-209ENST00000495826 TTBK1Q5TCY1 1321 aaPredicted RBP21.15■□□□□ 0.98
DGCR8-209ENST00000495826 UBTFP17480 764 aaKnown RBP21.13■□□□□ 0.97
DGCR8-209ENST00000495826 SCRIBQ14160 1630 aa21.08■□□□□ 0.96
DGCR8-209ENST00000495826 RSF1Q96T23 1441 aaPredicted RBP21.02■□□□□ 0.96
DGCR8-209ENST00000495826 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.93■□□□□ 0.94
DGCR8-209ENST00000495826 MYT1Q01538 1121 aa20.92■□□□□ 0.94
DGCR8-209ENST00000495826 ABCC9O60706 1549 aa20.92■□□□□ 0.94
DGCR8-209ENST00000495826 DIEXFQ68CQ4 756 aaKnown RBP20.85■□□□□ 0.93
DGCR8-209ENST00000495826 RB1CC1Q8TDY2 1594 aa20.83■□□□□ 0.92
DGCR8-209ENST00000495826 NACADO15069 1562 aa20.7■□□□□ 0.9
DGCR8-209ENST00000495826 RANGAP1P46060 587 aaPredicted RBP20.69■□□□□ 0.9
DGCR8-209ENST00000495826 YTHDC1Q96MU7 727 aaKnown RBP20.68■□□□□ 0.9
DGCR8-209ENST00000495826 ACIN1Q9UKV3 1341 aaKnown RBP20.65■□□□□ 0.9
DGCR8-209ENST00000495826 CSRNP3Q8WYN3 585 aa20.63■□□□□ 0.89
DGCR8-209ENST00000495826 HNRNPUL2Q1KMD3 747 aaKnown RBP20.61■□□□□ 0.89
DGCR8-209ENST00000495826 ZNF316A6NFI3 1004 aaPredicted RBP20.57■□□□□ 0.88
DGCR8-209ENST00000495826 GTF3C3Q9Y5Q9 886 aa20.53■□□□□ 0.88
DGCR8-209ENST00000495826 EEA1Q15075 1411 aa20.49■□□□□ 0.87
DGCR8-209ENST00000495826 SCAF1Q9H7N4 1312 aaKnown RBP20.48■□□□□ 0.87
DGCR8-209ENST00000495826 CECR2Q9BXF3 1484 aa20.45■□□□□ 0.86
DGCR8-209ENST00000495826 BAZ1AQ9NRL2 1556 aaPredicted RBP20.42■□□□□ 0.86
DGCR8-209ENST00000495826 CEP162Q5TB80 1403 aa20.38■□□□□ 0.85
DGCR8-209ENST00000495826 MROH2BQ7Z745 1585 aa20.38■□□□□ 0.85
DGCR8-209ENST00000495826 TNIKQ9UKE5 1360 aa20.37■□□□□ 0.85
DGCR8-209ENST00000495826 PABPN1Q86U42 306 aaKnown RBP eCLIP20.34■□□□□ 0.857e-7■□□□□ 10.4
DGCR8-209ENST00000495826 NEUROD1Q13562 356 aa20.33■□□□□ 0.84
DGCR8-209ENST00000495826 GOLGA3Q08378 1498 aa20.29■□□□□ 0.84
DGCR8-209ENST00000495826 NEFLP07196 543 aa20.25■□□□□ 0.83
DGCR8-209ENST00000495826 ATP1B4Q9UN42 357 aaPredicted RBP20.22■□□□□ 0.83
DGCR8-209ENST00000495826 WIZO95785 1651 aa20.18■□□□□ 0.82
DGCR8-209ENST00000495826 CLSPNQ9HAW4 1339 aa20.18■□□□□ 0.82
DGCR8-209ENST00000495826 ITGAEP38570 1179 aa20.17■□□□□ 0.82
DGCR8-209ENST00000495826 CLIP1P30622 1438 aa20.17■□□□□ 0.82
DGCR8-209ENST00000495826 WRNQ14191 1432 aaPredicted RBP eCLIP20.15■□□□□ 0.823e-7■■■■□ 25.1
DGCR8-209ENST00000495826 CEP164Q9UPV0 1460 aa20.13■□□□□ 0.81
DGCR8-209ENST00000495826 TOP2AP11388 1531 aaKnown RBP20.12■□□□□ 0.81
DGCR8-209ENST00000495826 CCDC88BA6NC98 1476 aa20.1■□□□□ 0.81
DGCR8-209ENST00000495826 SOGA1O94964 1423 aa20.07■□□□□ 0.8
DGCR8-209ENST00000495826 ABCC8Q09428 1581 aa20.03■□□□□ 0.8
DGCR8-209ENST00000495826 MIER1Q8N108 512 aa20■□□□□ 0.79
DGCR8-209ENST00000495826 ERICH6Q7L0X2 663 aa19.95■□□□□ 0.78
DGCR8-209ENST00000495826 FAM50AQ14320 339 aaKnown RBP19.92■□□□□ 0.78
DGCR8-209ENST00000495826 SMARCA4P51532 1647 aa19.9■□□□□ 0.78
DGCR8-209ENST00000495826 BAZ1BQ9UIG0 1483 aaKnown RBP19.89■□□□□ 0.77
DGCR8-209ENST00000495826 VPS8Q8N3P4 1428 aa19.89■□□□□ 0.77
DGCR8-209ENST00000495826 SMARCA2P51531 1590 aa19.8■□□□□ 0.76
DGCR8-209ENST00000495826 ANP32CO43423 234 aa19.8■□□□□ 0.76
DGCR8-209ENST00000495826 KIF27Q86VH2 1401 aa19.73■□□□□ 0.75
DGCR8-209ENST00000495826 RUSC2Q8N2Y8 1516 aa19.68■□□□□ 0.74
DGCR8-209ENST00000495826 BCANQ96GW7 911 aa19.63■□□□□ 0.73
DGCR8-209ENST00000495826 CCNB3Q8WWL7 1395 aa19.6■□□□□ 0.73
DGCR8-209ENST00000495826 P3H3Q8IVL6 736 aa19.58■□□□□ 0.72
DGCR8-209ENST00000495826 DDX10Q13206 875 aaKnown RBP19.57■□□□□ 0.72
DGCR8-209ENST00000495826 RAPGEF2Q9Y4G8 1499 aa19.57■□□□□ 0.72
DGCR8-209ENST00000495826 TONSLQ96HA7 1378 aa19.56■□□□□ 0.72
DGCR8-209ENST00000495826 KIF21BO75037 1637 aa19.55■□□□□ 0.72
DGCR8-209ENST00000495826 ATAD2BQ9ULI0 1458 aa19.54■□□□□ 0.72
DGCR8-209ENST00000495826 FKBP8Q14318 412 aa19.54■□□□□ 0.72
DGCR8-209ENST00000495826 TRIM52Q96A61 297 aa19.53■□□□□ 0.72
DGCR8-209ENST00000495826 CDK11AQ9UQ88 783 aaPredicted RBP19.49■□□□□ 0.71
DGCR8-209ENST00000495826 TIMELESSQ9UNS1 1208 aa19.49■□□□□ 0.71
DGCR8-209ENST00000495826 SUPT16HQ9Y5B9 1047 aaKnown RBP19.48■□□□□ 0.71
DGCR8-209ENST00000495826 KANK4Q5T7N3 995 aaPredicted RBP19.47■□□□□ 0.71
DGCR8-209ENST00000495826 DHX57Q6P158 1386 aaKnown RBP19.46■□□□□ 0.71
DGCR8-209ENST00000495826 FHAD1B1AJZ9 1412 aa19.45■□□□□ 0.7
DGCR8-209ENST00000495826 EIF4G1Q04637 1599 aaKnown RBP19.4■□□□□ 0.7
DGCR8-209ENST00000495826 SETD5Q9C0A6 1442 aa19.4■□□□□ 0.7
DGCR8-209ENST00000495826 MTUS2Q5JR59 1369 aa19.38■□□□□ 0.69
DGCR8-209ENST00000495826 CARMIL1Q5VZK9 1371 aa19.37■□□□□ 0.69
DGCR8-209ENST00000495826 SYNJ1O43426 1573 aa19.36■□□□□ 0.69
DGCR8-209ENST00000495826 CUX2O14529 1486 aa19.35■□□□□ 0.69
DGCR8-209ENST00000495826 POLR3GLQ9BT43 218 aa19.35■□□□□ 0.69
DGCR8-209ENST00000495826 RAB3GAP2Q9H2M9 1393 aa19.34■□□□□ 0.69
DGCR8-209ENST00000495826 ERICH3Q5RHP9 1530 aa19.33■□□□□ 0.69
DGCR8-209ENST00000495826 HNRNPUQ00839 825 aaKnown RBP eCLIP19.31■□□□□ 0.68
DGCR8-209ENST00000495826 CCER2I3L3R5 266 aa19.3■□□□□ 0.68
DGCR8-209ENST00000495826 SIN3AQ96ST3 1273 aa19.28■□□□□ 0.68
DGCR8-209ENST00000495826 ANP32EQ9BTT0 268 aa19.27■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms