RNA–Protein interactions for RNA: ENST00000319622.10

PKM-201, Transcript of pyruvate kinase M1/2, humanhuman

APPRIS P5 TSL 2 BASIC

Gene PKM, Length 2,717 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-201ENST00000319622 NISCHQ9Y2I1 1504 aa47.99■■■■■ 5.27
PKM-201ENST00000319622 CCDC180Q9P1Z9 1646 aa41.07■■■■■ 4.16
PKM-201ENST00000319622 SHROOM4Q9ULL8 1493 aa40.58■■■■■ 4.09
PKM-201ENST00000319622 ZCCHC6Q5VYS8 1495 aaKnown RBP40.49■■■■■ 4.07
PKM-201ENST00000319622 DCAF8L2P0C7V8 631 aa40■■■■□ 3.99
PKM-201ENST00000319622 SUPT5HO00267 1087 aaKnown RBP39.49■■■■□ 3.91
PKM-201ENST00000319622 DCAF1Q9Y4B6 1507 aa39.33■■■■□ 3.89
PKM-201ENST00000319622 ABCC9O60706 1549 aa38.59■■■■□ 3.77
PKM-201ENST00000319622 SCRIBQ14160 1630 aa38.47■■■■□ 3.75
PKM-201ENST00000319622 MYO15BQ96JP2 1530 aa38.39■■■■□ 3.74
PKM-201ENST00000319622 NACADO15069 1562 aa38.09■■■■□ 3.69
PKM-201ENST00000319622 CHIC1Q5VXU3 224 aa38.07■■■■□ 3.69
PKM-201ENST00000319622 RSF1Q96T23 1441 aaPredicted RBP37.76■■■■□ 3.64
PKM-201ENST00000319622 RB1CC1Q8TDY2 1594 aa37.6■■■■□ 3.61
PKM-201ENST00000319622 CECR2Q9BXF3 1484 aa37.52■■■■□ 3.6
PKM-201ENST00000319622 MROH2BQ7Z745 1585 aa37.32■■■■□ 3.56
PKM-201ENST00000319622 WIZO95785 1651 aa37.1■■■■□ 3.53
PKM-201ENST00000319622 UNC13AQ9UPW8 1703 aa37.1■■■■□ 3.53
PKM-201ENST00000319622 LOC105371045A0A1W2PR82 267 aa36.96■■■■□ 3.51
PKM-201ENST00000319622 BAZ1AQ9NRL2 1556 aaPredicted RBP36.9■■■■□ 3.5
PKM-201ENST00000319622 PABPN1Q86U42 306 aaKnown RBP eCLIP36.79■■■■□ 3.483e-11■□□□□ 10.4
PKM-201ENST00000319622 TRIM41Q8WV44 630 aa36.78■■■■□ 3.48
PKM-201ENST00000319622 SMARCA4P51532 1647 aa36.69■■■■□ 3.46
PKM-201ENST00000319622 BICRAQ9NZM4 1560 aa36.64■■■■□ 3.46
PKM-201ENST00000319622 FAM9AQ8IZU1 332 aaPredicted RBP36.53■■■■□ 3.44
PKM-201ENST00000319622 TOP2AP11388 1531 aaKnown RBP36.47■■■■□ 3.43
PKM-201ENST00000319622 EIF4G1Q04637 1599 aaKnown RBP36.32■■■■□ 3.41
PKM-201ENST00000319622 PCGF6Q9BYE7 350 aa36.32■■■■□ 3.41
PKM-201ENST00000319622 CCDC88BA6NC98 1476 aa36.31■■■■□ 3.4
PKM-201ENST00000319622 EHMT2Q96KQ7 1210 aa36.28■■■■□ 3.4
PKM-201ENST00000319622 SMARCA2P51531 1590 aa36.27■■■■□ 3.4
PKM-201ENST00000319622 ABCC8Q09428 1581 aa36.09■■■■□ 3.37
PKM-201ENST00000319622 PEG3Q9GZU2 1588 aa35.97■■■■□ 3.35
PKM-201ENST00000319622 ATAD2BQ9ULI0 1458 aa35.87■■■■□ 3.33
PKM-201ENST00000319622 HRCP23327 699 aa35.86■■■■□ 3.33
PKM-201ENST00000319622 BAZ1BQ9UIG0 1483 aaKnown RBP35.75■■■■□ 3.31
PKM-201ENST00000319622 TRIM26Q12899 539 aaPredicted RBP35.7■■■■□ 3.31
PKM-201ENST00000319622 SOGA1O94964 1423 aa35.6■■■■□ 3.29
PKM-201ENST00000319622 WRNQ14191 1432 aaPredicted RBP eCLIP35.49■■■■□ 3.271e-7■■■■□ 20.9
PKM-201ENST00000319622 RUSC2Q8N2Y8 1516 aa35.48■■■■□ 3.27
PKM-201ENST00000319622 PPARGC1BQ86YN6 1023 aaKnown RBP35.38■■■■□ 3.25
PKM-201ENST00000319622 SYNJ1O43426 1573 aa35.38■■■■□ 3.25
PKM-201ENST00000319622 CSRNP3Q8WYN3 585 aa35.29■■■■□ 3.24
PKM-201ENST00000319622 NCAPD3P42695 1498 aa35.24■■■■□ 3.23
PKM-201ENST00000319622 EEA1Q15075 1411 aa35.22■■■■□ 3.23
PKM-201ENST00000319622 HMGXB3Q12766 1538 aa35.21■■■■□ 3.23
PKM-201ENST00000319622 CEP162Q5TB80 1403 aa35.14■■■■□ 3.22
PKM-201ENST00000319622 UBTFP17480 764 aaKnown RBP35.14■■■■□ 3.22
PKM-201ENST00000319622 TNIKQ9UKE5 1360 aa35.09■■■■□ 3.21
PKM-201ENST00000319622 GOLGA3Q08378 1498 aa35.01■■■■□ 3.2
PKM-201ENST00000319622 TOP2BQ02880 1626 aa34.95■■■■□ 3.19
PKM-201ENST00000319622 TTBK1Q5TCY1 1321 aaPredicted RBP34.95■■■■□ 3.19
PKM-201ENST00000319622 CEP164Q9UPV0 1460 aa34.87■■■■□ 3.17
PKM-201ENST00000319622 BIVM-ERCC5R4GMW8 1640 aa34.84■■■■□ 3.17
PKM-201ENST00000319622 KIF21BO75037 1637 aa34.83■■■■□ 3.17
PKM-201ENST00000319622 CFTRP13569 1480 aa34.82■■■■□ 3.17
PKM-201ENST00000319622 CUX1P39880 1505 aa34.78■■■■□ 3.16
PKM-201ENST00000319622 RAPGEF2Q9Y4G8 1499 aa34.76■■■■□ 3.16
PKM-201ENST00000319622 CC2D2AQ9P2K1 1620 aa34.73■■■■□ 3.15
PKM-201ENST00000319622 RANGAP1P46060 587 aaPredicted RBP34.68■■■■□ 3.14
PKM-201ENST00000319622 CLIP1P30622 1438 aa34.61■■■■□ 3.13
PKM-201ENST00000319622 ZEB1P37275 1124 aaPredicted RBP34.58■■■■□ 3.13
PKM-201ENST00000319622 CADPSQ9ULU8 1353 aa34.54■■■■□ 3.12
PKM-201ENST00000319622 PRDM2Q13029 1718 aa34.53■■■■□ 3.12
PKM-201ENST00000319622 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.49■■■■□ 3.11
PKM-201ENST00000319622 PRXQ9BXM0 1461 aa34.44■■■■□ 3.1
PKM-201ENST00000319622 KIF27Q86VH2 1401 aa34.43■■■■□ 3.1
PKM-201ENST00000319622 VPS8Q8N3P4 1428 aa34.37■■■■□ 3.09
PKM-201ENST00000319622 ERICH3Q5RHP9 1530 aa34.36■■■■□ 3.09
PKM-201ENST00000319622 CCER1Q8TC90 406 aaPredicted RBP34.32■■■■□ 3.08
PKM-201ENST00000319622 CUX2O14529 1486 aa34.26■■■■□ 3.08
PKM-201ENST00000319622 FGD5Q6ZNL6 1462 aa34.25■■■■□ 3.07
PKM-201ENST00000319622 FANCD2Q9BXW9 1451 aa34.24■■■■□ 3.07
PKM-201ENST00000319622 NESP48681 1621 aa34.23■■■■□ 3.07
PKM-201ENST00000319622 APLP2Q06481 763 aa34.17■■■■□ 3.06
PKM-201ENST00000319622 ARAP1Q96P48 1450 aa34.14■■■■□ 3.06
PKM-201ENST00000319622 IGF1RP08069 1367 aa34.11■■■■□ 3.05
PKM-201ENST00000319622 DNAJC5BQ9UF47 199 aa34.09■■■■□ 3.05
PKM-201ENST00000319622 HNRNPUL2Q1KMD3 747 aaKnown RBP34.04■■■■□ 3.04
PKM-201ENST00000319622 RAD54L2Q9Y4B4 1467 aa33.99■■■■□ 3.03
PKM-201ENST00000319622 DNMBPQ6XZF7 1577 aa33.97■■■■□ 3.03
PKM-201ENST00000319622 CARMIL1Q5VZK9 1371 aa33.97■■■■□ 3.03
PKM-201ENST00000319622 TOPBP1Q92547 1522 aa33.96■■■■□ 3.03
PKM-201ENST00000319622 ARHGAP35Q9NRY4 1499 aa33.94■■■■□ 3.02
PKM-201ENST00000319622 POLA1P09884 1462 aaPredicted RBP33.91■■■■□ 3.02
PKM-201ENST00000319622 KANK4Q5T7N3 995 aaPredicted RBP33.89■■■■□ 3.02
PKM-201ENST00000319622 LAMC3Q9Y6N6 1575 aa33.84■■■■□ 3.01
PKM-201ENST00000319622 ABCA10Q8WWZ4 1543 aa33.79■■■■□ 3
PKM-201ENST00000319622 URB2Q14146 1524 aaKnown RBP33.79■■■■□ 3
PKM-201ENST00000319622 P3H3Q8IVL6 736 aa33.66■■■□□ 2.98
PKM-201ENST00000319622 PDS5BQ9NTI5 1447 aa33.64■■■□□ 2.98
PKM-201ENST00000319622 KIF21AQ7Z4S6 1674 aa33.62■■■□□ 2.97
PKM-201ENST00000319622 TDRD9Q8NDG6 1382 aaKnown RBP33.61■■■□□ 2.97
PKM-201ENST00000319622 WDR97A6NE52 1622 aa33.56■■■□□ 2.96
PKM-201ENST00000319622 CUL7Q14999 1698 aa33.51■■■□□ 2.96
PKM-201ENST00000319622 FHOD3Q2V2M9 1422 aa33.47■■■□□ 2.95
PKM-201ENST00000319622 RRBP1Q9P2E9 1410 aaKnown RBP33.46■■■□□ 2.95
PKM-201ENST00000319622 TIAM1Q13009 1591 aa33.45■■■□□ 2.95
PKM-201ENST00000319622 ATP1B4Q9UN42 357 aaPredicted RBP33.45■■■□□ 2.95
PKM-201ENST00000319622 ABCA5Q8WWZ7 1642 aa33.44■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms