RNA–Protein interactions for RNA: ENST00000476185.1

PPP1R35-203, Transcript of protein phosphatase 1 regulatory subunit 35, humanhuman

TSL 2

Gene PPP1R35, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R35-203ENST00000476185 NISCHQ9Y2I1 1504 aa49.99■■■■■ 5.59
PPP1R35-203ENST00000476185 CCDC180Q9P1Z9 1646 aa44.54■■■■■ 4.72
PPP1R35-203ENST00000476185 ABCC9O60706 1549 aa43.82■■■■■ 4.61
PPP1R35-203ENST00000476185 DCAF8L2P0C7V8 631 aa42.07■■■■■ 4.33
PPP1R35-203ENST00000476185 RB1CC1Q8TDY2 1594 aa42.05■■■■■ 4.32
PPP1R35-203ENST00000476185 NACADO15069 1562 aa41.91■■■■■ 4.3
PPP1R35-203ENST00000476185 ZCCHC6Q5VYS8 1495 aaKnown RBP41.6■■■■■ 4.25
PPP1R35-203ENST00000476185 MYO15BQ96JP2 1530 aa41.49■■■■■ 4.23
PPP1R35-203ENST00000476185 DCAF1Q9Y4B6 1507 aa41.28■■■■■ 4.2
PPP1R35-203ENST00000476185 UNC13AQ9UPW8 1703 aa41.08■■■■■ 4.17
PPP1R35-203ENST00000476185 PABPN1Q86U42 306 aaKnown RBP eCLIP40.92■■■■■ 4.147e-6■□□□□ 10.4
PPP1R35-203ENST00000476185 SCRIBQ14160 1630 aa40.73■■■■■ 4.11
PPP1R35-203ENST00000476185 BICRAQ9NZM4 1560 aa40.69■■■■■ 4.1
PPP1R35-203ENST00000476185 DNAJC5BQ9UF47 199 aa40.23■■■■■ 4.03
PPP1R35-203ENST00000476185 SHROOM4Q9ULL8 1493 aa40.22■■■■■ 4.03
PPP1R35-203ENST00000476185 EIF4G1Q04637 1599 aaKnown RBP39.68■■■■□ 3.94
PPP1R35-203ENST00000476185 CC2D2AQ9P2K1 1620 aa39.58■■■■□ 3.93
PPP1R35-203ENST00000476185 CECR2Q9BXF3 1484 aa39.36■■■■□ 3.89
PPP1R35-203ENST00000476185 SMARCA4P51532 1647 aa38.86■■■■□ 3.81
PPP1R35-203ENST00000476185 BAZ1AQ9NRL2 1556 aaPredicted RBP38.8■■■■□ 3.8
PPP1R35-203ENST00000476185 ATAD2BQ9ULI0 1458 aa38.65■■■■□ 3.78
PPP1R35-203ENST00000476185 SMARCA2P51531 1590 aa38.65■■■■□ 3.78
PPP1R35-203ENST00000476185 NCAPD3P42695 1498 aa38.61■■■■□ 3.77
PPP1R35-203ENST00000476185 MROH2BQ7Z745 1585 aa38.54■■■■□ 3.76
PPP1R35-203ENST00000476185 HMGXB3Q12766 1538 aa38.46■■■■□ 3.75
PPP1R35-203ENST00000476185 BAZ1BQ9UIG0 1483 aaKnown RBP38.41■■■■□ 3.74
PPP1R35-203ENST00000476185 PEG3Q9GZU2 1588 aa38.39■■■■□ 3.74
PPP1R35-203ENST00000476185 WIZO95785 1651 aa38.17■■■■□ 3.7
PPP1R35-203ENST00000476185 RSF1Q96T23 1441 aaPredicted RBP38.02■■■■□ 3.68
PPP1R35-203ENST00000476185 ERCC6Q03468 1493 aa37.84■■■■□ 3.65
PPP1R35-203ENST00000476185 NESP48681 1621 aa37.83■■■■□ 3.65
PPP1R35-203ENST00000476185 TOP2AP11388 1531 aaKnown RBP37.72■■■■□ 3.63
PPP1R35-203ENST00000476185 LAMC3Q9Y6N6 1575 aa37.7■■■■□ 3.63
PPP1R35-203ENST00000476185 CADPSQ9ULU8 1353 aa37.53■■■■□ 3.6
PPP1R35-203ENST00000476185 PDS5BQ9NTI5 1447 aa37.47■■■■□ 3.59
PPP1R35-203ENST00000476185 KIF21AQ7Z4S6 1674 aa37.42■■■■□ 3.58
PPP1R35-203ENST00000476185 CUX2O14529 1486 aa37.37■■■■□ 3.57
PPP1R35-203ENST00000476185 CCDC88BA6NC98 1476 aa37.26■■■■□ 3.56
PPP1R35-203ENST00000476185 THOC2Q8NI27 1593 aaKnown RBP37.26■■■■□ 3.56
PPP1R35-203ENST00000476185 CFTRP13569 1480 aa37.25■■■■□ 3.55
PPP1R35-203ENST00000476185 FANCD2Q9BXW9 1451 aa37.15■■■■□ 3.54
PPP1R35-203ENST00000476185 CEP164Q9UPV0 1460 aa37.15■■■■□ 3.54
PPP1R35-203ENST00000476185 SUPT5HO00267 1087 aaKnown RBP37.14■■■■□ 3.54
PPP1R35-203ENST00000476185 MRC2Q9UBG0 1479 aa37.1■■■■□ 3.53
PPP1R35-203ENST00000476185 PRDM2Q13029 1718 aa37.06■■■■□ 3.52
PPP1R35-203ENST00000476185 WDR62O43379 1518 aa36.93■■■■□ 3.5
PPP1R35-203ENST00000476185 URB2Q14146 1524 aaKnown RBP36.75■■■■□ 3.47
PPP1R35-203ENST00000476185 TOPBP1Q92547 1522 aa36.52■■■■□ 3.44
PPP1R35-203ENST00000476185 ABCC8Q09428 1581 aa36.51■■■■□ 3.44
PPP1R35-203ENST00000476185 DNMBPQ6XZF7 1577 aa36.48■■■■□ 3.43
PPP1R35-203ENST00000476185 DNAJC5Q9H3Z4 198 aa36.39■■■■□ 3.42
PPP1R35-203ENST00000476185 IFT140Q96RY7 1462 aa36.32■■■■□ 3.41
PPP1R35-203ENST00000476185 POLA1P09884 1462 aaPredicted RBP36.18■■■■□ 3.38
PPP1R35-203ENST00000476185 CUX1P39880 1505 aa36.18■■■■□ 3.38
PPP1R35-203ENST00000476185 ZNF608Q9ULD9 1512 aaPredicted RBP36.18■■■■□ 3.38
PPP1R35-203ENST00000476185 FGD5Q6ZNL6 1462 aa36.11■■■■□ 3.37
PPP1R35-203ENST00000476185 TARBP1Q13395 1621 aaKnown RBP36.1■■■■□ 3.37
PPP1R35-203ENST00000476185 SOGA1O94964 1423 aa36.08■■■■□ 3.37
PPP1R35-203ENST00000476185 EIF4G3O43432 1585 aaKnown RBP36.06■■■■□ 3.36
PPP1R35-203ENST00000476185 RAD54L2Q9Y4B4 1467 aa36.06■■■■□ 3.36
PPP1R35-203ENST00000476185 AQRO60306 1485 aaKnown RBP eCLIP35.97■■■■□ 3.351e-14■■■□□ 15
PPP1R35-203ENST00000476185 WRNQ14191 1432 aaPredicted RBP eCLIP35.92■■■■□ 3.34
PPP1R35-203ENST00000476185 TDRD9Q8NDG6 1382 aaKnown RBP35.9■■■■□ 3.34
PPP1R35-203ENST00000476185 OSCARQ8IYS5 282 aa35.84■■■■□ 3.33
PPP1R35-203ENST00000476185 TOP2BQ02880 1626 aa35.83■■■■□ 3.33
PPP1R35-203ENST00000476185 BIVM-ERCC5R4GMW8 1640 aa35.83■■■■□ 3.33
PPP1R35-203ENST00000476185 SYNJ1O43426 1573 aa35.82■■■■□ 3.32
PPP1R35-203ENST00000476185 WDR97A6NE52 1622 aa35.8■■■■□ 3.32
PPP1R35-203ENST00000476185 FBLN2P98095 1184 aa35.72■■■■□ 3.31
PPP1R35-203ENST00000476185 ABCA10Q8WWZ4 1543 aa35.7■■■■□ 3.31
PPP1R35-203ENST00000476185 CHD1O14646 1710 aa35.69■■■■□ 3.3
PPP1R35-203ENST00000476185 GRIN2BQ13224 1484 aa35.67■■■■□ 3.3
PPP1R35-203ENST00000476185 GAPVD1Q14C86 1478 aa35.66■■■■□ 3.3
PPP1R35-203ENST00000476185 SNAPC4Q5SXM2 1469 aa35.66■■■■□ 3.3
PPP1R35-203ENST00000476185 PBRM1Q86U86 1689 aa35.64■■■■□ 3.3
PPP1R35-203ENST00000476185 ABCA5Q8WWZ7 1642 aa35.59■■■■□ 3.29
PPP1R35-203ENST00000476185 MAGI1Q96QZ7 1491 aaPredicted RBP35.57■■■■□ 3.28
PPP1R35-203ENST00000476185 CHMP7Q8WUX9 453 aaPredicted RBP35.52■■■■□ 3.28
PPP1R35-203ENST00000476185 SYNJ2O15056 1496 aa35.44■■■■□ 3.26
PPP1R35-203ENST00000476185 TRIM41Q8WV44 630 aa35.33■■■■□ 3.25
PPP1R35-203ENST00000476185 ADAMTS12P58397 1594 aa35.3■■■■□ 3.24
PPP1R35-203ENST00000476185 ERICH3Q5RHP9 1530 aa35.29■■■■□ 3.24
PPP1R35-203ENST00000476185 RIMBP3CA6NJZ7 1639 aa35.28■■■■□ 3.24
PPP1R35-203ENST00000476185 RIMBP3BA6NNM3 1639 aa35.28■■■■□ 3.24
PPP1R35-203ENST00000476185 RIMBP3Q9UFD9 1639 aa35.28■■■■□ 3.24
PPP1R35-203ENST00000476185 ARHGEF11O15085 1522 aa35.25■■■■□ 3.23
PPP1R35-203ENST00000476185 FHAD1B1AJZ9 1412 aa35.22■■■■□ 3.23
PPP1R35-203ENST00000476185 KIF27Q86VH2 1401 aa35.2■■■■□ 3.23
PPP1R35-203ENST00000476185 GRIN2AQ12879 1464 aa35.2■■■■□ 3.23
PPP1R35-203ENST00000476185 CLASP1Q7Z460 1538 aa35.18■■■■□ 3.22
PPP1R35-203ENST00000476185 CEP170Q5SW79 1584 aa35.02■■■■□ 3.2
PPP1R35-203ENST00000476185 NUP160Q12769 1436 aa34.99■■■■□ 3.19
PPP1R35-203ENST00000476185 CUL7Q14999 1698 aa34.99■■■■□ 3.19
PPP1R35-203ENST00000476185 CYB5RLQ6IPT4 315 aa34.99■■■■□ 3.19
PPP1R35-203ENST00000476185 IGF1RP08069 1367 aa34.99■■■■□ 3.19
PPP1R35-203ENST00000476185 ARAP1Q96P48 1450 aa34.93■■■■□ 3.18
PPP1R35-203ENST00000476185 CARMIL1Q5VZK9 1371 aa34.85■■■■□ 3.17
PPP1R35-203ENST00000476185 RUSC2Q8N2Y8 1516 aa34.79■■■■□ 3.16
PPP1R35-203ENST00000476185 SHROOM2Q13796 1616 aa34.76■■■■□ 3.15
PPP1R35-203ENST00000476185 ERCC6L2Q5T890 1561 aa34.72■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms