RNA–Protein interactions for RNA: ENST00000562879.5

RPL13-210, Transcript of ribosomal protein L13, humanhuman

TSL 1 (best)

Gene RPL13, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13-210ENST00000562879 NISCHQ9Y2I1 1504 aa37.71■■■■□ 3.63
RPL13-210ENST00000562879 CCDC180Q9P1Z9 1646 aa33.74■■■□□ 2.99
RPL13-210ENST00000562879 ABCC9O60706 1549 aa32.98■■■□□ 2.87
RPL13-210ENST00000562879 RB1CC1Q8TDY2 1594 aa31.77■■■□□ 2.68
RPL13-210ENST00000562879 NACADO15069 1562 aa31.72■■■□□ 2.67
RPL13-210ENST00000562879 MYO15BQ96JP2 1530 aa31.58■■■□□ 2.65
RPL13-210ENST00000562879 ZCCHC6Q5VYS8 1495 aaKnown RBP31.42■■■□□ 2.62
RPL13-210ENST00000562879 DCAF1Q9Y4B6 1507 aa31.33■■■□□ 2.61
RPL13-210ENST00000562879 DCAF8L2P0C7V8 631 aa31.2■■■□□ 2.59
RPL13-210ENST00000562879 UNC13AQ9UPW8 1703 aa31.09■■■□□ 2.57
RPL13-210ENST00000562879 BICRAQ9NZM4 1560 aa30.87■■■□□ 2.53
RPL13-210ENST00000562879 PABPN1Q86U42 306 aaKnown RBP eCLIP30.68■■■□□ 2.52e-10■□□□□ 10.4
RPL13-210ENST00000562879 SHROOM4Q9ULL8 1493 aa30.63■■■□□ 2.49
RPL13-210ENST00000562879 SCRIBQ14160 1630 aa30.58■■■□□ 2.49
RPL13-210ENST00000562879 DNAJC5BQ9UF47 199 aa30.48■■■□□ 2.47
RPL13-210ENST00000562879 EIF4G1Q04637 1599 aaKnown RBP30.03■■■□□ 2.4
RPL13-210ENST00000562879 CC2D2AQ9P2K1 1620 aa29.93■■■□□ 2.38
RPL13-210ENST00000562879 CECR2Q9BXF3 1484 aa29.72■■■□□ 2.35
RPL13-210ENST00000562879 SMARCA4P51532 1647 aa29.33■■■□□ 2.29
RPL13-210ENST00000562879 NCAPD3P42695 1498 aa29.26■■■□□ 2.27
RPL13-210ENST00000562879 BAZ1AQ9NRL2 1556 aaPredicted RBP29.26■■■□□ 2.27
RPL13-210ENST00000562879 ATAD2BQ9ULI0 1458 aa29.19■■■□□ 2.26
RPL13-210ENST00000562879 SMARCA2P51531 1590 aa29.18■■■□□ 2.26
RPL13-210ENST00000562879 PEG3Q9GZU2 1588 aa29.16■■■□□ 2.26
RPL13-210ENST00000562879 HMGXB3Q12766 1538 aa29.15■■■□□ 2.26
RPL13-210ENST00000562879 MROH2BQ7Z745 1585 aa29.02■■■□□ 2.24
RPL13-210ENST00000562879 BAZ1BQ9UIG0 1483 aaKnown RBP28.91■■■□□ 2.22
RPL13-210ENST00000562879 WIZO95785 1651 aa28.68■■■□□ 2.18
RPL13-210ENST00000562879 RSF1Q96T23 1441 aaPredicted RBP28.61■■■□□ 2.17
RPL13-210ENST00000562879 LAMC3Q9Y6N6 1575 aa28.53■■■□□ 2.16
RPL13-210ENST00000562879 NESP48681 1621 aa28.51■■■□□ 2.15
RPL13-210ENST00000562879 ERCC6Q03468 1493 aa28.43■■■□□ 2.14
RPL13-210ENST00000562879 TOP2AP11388 1531 aaKnown RBP28.43■■■□□ 2.14
RPL13-210ENST00000562879 CUX2O14529 1486 aa28.38■■■□□ 2.13
RPL13-210ENST00000562879 CADPSQ9ULU8 1353 aa28.32■■■□□ 2.12
RPL13-210ENST00000562879 THOC2Q8NI27 1593 aaKnown RBP28.27■■■□□ 2.12
RPL13-210ENST00000562879 PDS5BQ9NTI5 1447 aa28.26■■■□□ 2.11
RPL13-210ENST00000562879 KIF21AQ7Z4S6 1674 aa28.24■■■□□ 2.11
RPL13-210ENST00000562879 CFTRP13569 1480 aa28.17■■■□□ 2.1
RPL13-210ENST00000562879 CCDC88BA6NC98 1476 aa28.02■■■□□ 2.08
RPL13-210ENST00000562879 MRC2Q9UBG0 1479 aa28.01■■■□□ 2.07
RPL13-210ENST00000562879 PRDM2Q13029 1718 aa28■■■□□ 2.07
RPL13-210ENST00000562879 WDR62O43379 1518 aa27.99■■■□□ 2.07
RPL13-210ENST00000562879 FANCD2Q9BXW9 1451 aa27.99■■■□□ 2.07
RPL13-210ENST00000562879 CEP164Q9UPV0 1460 aa27.98■■■□□ 2.07
RPL13-210ENST00000562879 URB2Q14146 1524 aaKnown RBP27.76■■■□□ 2.03
RPL13-210ENST00000562879 DNAJC5Q9H3Z4 198 aa27.66■■■□□ 2.02
RPL13-210ENST00000562879 ABCC8Q09428 1581 aa27.56■■■□□ 2
RPL13-210ENST00000562879 TOPBP1Q92547 1522 aa27.54■■■□□ 2
RPL13-210ENST00000562879 DNMBPQ6XZF7 1577 aa27.52■■■□□ 2
RPL13-210ENST00000562879 IFT140Q96RY7 1462 aa27.43■■□□□ 1.98
RPL13-210ENST00000562879 SUPT5HO00267 1087 aaKnown RBP27.42■■□□□ 1.98
RPL13-210ENST00000562879 TARBP1Q13395 1621 aaKnown RBP27.33■■□□□ 1.97
RPL13-210ENST00000562879 POLA1P09884 1462 aaPredicted RBP27.3■■□□□ 1.96
RPL13-210ENST00000562879 ZNF608Q9ULD9 1512 aaPredicted RBP27.27■■□□□ 1.96
RPL13-210ENST00000562879 CUX1P39880 1505 aa27.26■■□□□ 1.95
RPL13-210ENST00000562879 EIF4G3O43432 1585 aaKnown RBP27.22■■□□□ 1.95
RPL13-210ENST00000562879 WDR97A6NE52 1622 aa27.17■■□□□ 1.94
RPL13-210ENST00000562879 FGD5Q6ZNL6 1462 aa27.17■■□□□ 1.94
RPL13-210ENST00000562879 SOGA1O94964 1423 aa27.1■■□□□ 1.93
RPL13-210ENST00000562879 RAD54L2Q9Y4B4 1467 aa27.09■■□□□ 1.93
RPL13-210ENST00000562879 AQRO60306 1485 aaKnown RBP eCLIP27.05■■□□□ 1.921e-12■■■■■ 27.8
RPL13-210ENST00000562879 BIVM-ERCC5R4GMW8 1640 aa27.02■■□□□ 1.92
RPL13-210ENST00000562879 TOP2BQ02880 1626 aa27.01■■□□□ 1.91
RPL13-210ENST00000562879 OSCARQ8IYS5 282 aa26.99■■□□□ 1.91
RPL13-210ENST00000562879 ABCA10Q8WWZ4 1543 aa26.95■■□□□ 1.91
RPL13-210ENST00000562879 WRNQ14191 1432 aaPredicted RBP eCLIP26.95■■□□□ 1.9
RPL13-210ENST00000562879 SYNJ1O43426 1573 aa26.94■■□□□ 1.9
RPL13-210ENST00000562879 TDRD9Q8NDG6 1382 aaKnown RBP26.94■■□□□ 1.9
RPL13-210ENST00000562879 ABCA5Q8WWZ7 1642 aa26.9■■□□□ 1.9
RPL13-210ENST00000562879 CHD1O14646 1710 aa26.9■■□□□ 1.9
RPL13-210ENST00000562879 GRIN2BQ13224 1484 aa26.87■■□□□ 1.89
RPL13-210ENST00000562879 MAGI1Q96QZ7 1491 aaPredicted RBP26.87■■□□□ 1.89
RPL13-210ENST00000562879 SNAPC4Q5SXM2 1469 aa26.84■■□□□ 1.89
RPL13-210ENST00000562879 PBRM1Q86U86 1689 aa26.84■■□□□ 1.89
RPL13-210ENST00000562879 GAPVD1Q14C86 1478 aa26.82■■□□□ 1.88
RPL13-210ENST00000562879 SYNJ2O15056 1496 aa26.75■■□□□ 1.87
RPL13-210ENST00000562879 RIMBP3CA6NJZ7 1639 aa26.69■■□□□ 1.86
RPL13-210ENST00000562879 RIMBP3BA6NNM3 1639 aa26.69■■□□□ 1.86
RPL13-210ENST00000562879 RIMBP3Q9UFD9 1639 aa26.69■■□□□ 1.86
RPL13-210ENST00000562879 CLASP1Q7Z460 1538 aa26.68■■□□□ 1.86
RPL13-210ENST00000562879 ARHGEF11O15085 1522 aa26.67■■□□□ 1.86
RPL13-210ENST00000562879 ERICH3Q5RHP9 1530 aa26.65■■□□□ 1.86
RPL13-210ENST00000562879 ADAMTS12P58397 1594 aa26.63■■□□□ 1.85
RPL13-210ENST00000562879 FBLN2P98095 1184 aa26.59■■□□□ 1.85
RPL13-210ENST00000562879 CHMP7Q8WUX9 453 aaPredicted RBP26.58■■□□□ 1.85
RPL13-210ENST00000562879 GRIN2AQ12879 1464 aa26.55■■□□□ 1.84
RPL13-210ENST00000562879 FHAD1B1AJZ9 1412 aa26.53■■□□□ 1.84
RPL13-210ENST00000562879 NUP160Q12769 1436 aa26.48■■□□□ 1.83
RPL13-210ENST00000562879 ARAP1Q96P48 1450 aa26.44■■□□□ 1.82
RPL13-210ENST00000562879 TRIM41Q8WV44 630 aa26.44■■□□□ 1.82
RPL13-210ENST00000562879 CEP170Q5SW79 1584 aa26.44■■□□□ 1.82
RPL13-210ENST00000562879 KIF27Q86VH2 1401 aa26.39■■□□□ 1.82
RPL13-210ENST00000562879 CUL7Q14999 1698 aa26.36■■□□□ 1.81
RPL13-210ENST00000562879 SHROOM2Q13796 1616 aa26.36■■□□□ 1.81
RPL13-210ENST00000562879 IGF1RP08069 1367 aa26.33■■□□□ 1.8
RPL13-210ENST00000562879 RUSC2Q8N2Y8 1516 aa26.26■■□□□ 1.79
RPL13-210ENST00000562879 CYB5RLQ6IPT4 315 aa26.24■■□□□ 1.79
RPL13-210ENST00000562879 ERCC6L2Q5T890 1561 aa26.2■■□□□ 1.78
RPL13-210ENST00000562879 KIAA0586Q9BVV6 1533 aa26.14■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms