RNA–Protein interactions for RNA: ENST00000464225.5

CHKB-203, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-203ENST00000464225 NISCHQ9Y2I1 1504 aa25.03■■□□□ 1.6
CHKB-203ENST00000464225 CCDC180Q9P1Z9 1646 aa22.39■■□□□ 1.17
CHKB-203ENST00000464225 ABCC9O60706 1549 aa22.22■■□□□ 1.15
CHKB-203ENST00000464225 RB1CC1Q8TDY2 1594 aa21.22■□□□□ 0.99
CHKB-203ENST00000464225 NACADO15069 1562 aa21.12■□□□□ 0.97
CHKB-203ENST00000464225 DCAF8L2P0C7V8 631 aa21.01■□□□□ 0.95
CHKB-203ENST00000464225 MYO15BQ96JP2 1530 aa20.89■□□□□ 0.94
CHKB-203ENST00000464225 ZCCHC6Q5VYS8 1495 aaKnown RBP20.81■□□□□ 0.92
CHKB-203ENST00000464225 UNC13AQ9UPW8 1703 aa20.75■□□□□ 0.91
CHKB-203ENST00000464225 PABPN1Q86U42 306 aaKnown RBP eCLIP20.71■□□□□ 0.911e-6■□□□□ 10.4
CHKB-203ENST00000464225 DCAF1Q9Y4B6 1507 aa20.68■□□□□ 0.9
CHKB-203ENST00000464225 DNAJC5BQ9UF47 199 aa20.68■□□□□ 0.9
CHKB-203ENST00000464225 BICRAQ9NZM4 1560 aa20.61■□□□□ 0.89
CHKB-203ENST00000464225 SCRIBQ14160 1630 aa20.43■□□□□ 0.86
CHKB-203ENST00000464225 SHROOM4Q9ULL8 1493 aa20.34■□□□□ 0.85
CHKB-203ENST00000464225 EIF4G1Q04637 1599 aaKnown RBP20.09■□□□□ 0.81
CHKB-203ENST00000464225 CC2D2AQ9P2K1 1620 aa20.09■□□□□ 0.81
CHKB-203ENST00000464225 CECR2Q9BXF3 1484 aa19.99■□□□□ 0.79
CHKB-203ENST00000464225 SMARCA4P51532 1647 aa19.5■□□□□ 0.71
CHKB-203ENST00000464225 NCAPD3P42695 1498 aa19.49■□□□□ 0.71
CHKB-203ENST00000464225 ATAD2BQ9ULI0 1458 aa19.48■□□□□ 0.71
CHKB-203ENST00000464225 BAZ1AQ9NRL2 1556 aaPredicted RBP19.42■□□□□ 0.7
CHKB-203ENST00000464225 SMARCA2P51531 1590 aa19.41■□□□□ 0.7
CHKB-203ENST00000464225 HMGXB3Q12766 1538 aa19.37■□□□□ 0.69
CHKB-203ENST00000464225 MROH2BQ7Z745 1585 aa19.31■□□□□ 0.68
CHKB-203ENST00000464225 PEG3Q9GZU2 1588 aa19.31■□□□□ 0.68
CHKB-203ENST00000464225 BAZ1BQ9UIG0 1483 aaKnown RBP19.28■□□□□ 0.68
CHKB-203ENST00000464225 ERCC6Q03468 1493 aa19.16■□□□□ 0.66
CHKB-203ENST00000464225 NESP48681 1621 aa19.14■□□□□ 0.66
CHKB-203ENST00000464225 CUX2O14529 1486 aa19.07■□□□□ 0.64
CHKB-203ENST00000464225 WIZO95785 1651 aa19.07■□□□□ 0.64
CHKB-203ENST00000464225 LAMC3Q9Y6N6 1575 aa19.02■□□□□ 0.64
CHKB-203ENST00000464225 RSF1Q96T23 1441 aaPredicted RBP18.96■□□□□ 0.63
CHKB-203ENST00000464225 THOC2Q8NI27 1593 aaKnown RBP18.93■□□□□ 0.62
CHKB-203ENST00000464225 CADPSQ9ULU8 1353 aa18.91■□□□□ 0.62
CHKB-203ENST00000464225 PDS5BQ9NTI5 1447 aa18.91■□□□□ 0.62
CHKB-203ENST00000464225 KIF21AQ7Z4S6 1674 aa18.89■□□□□ 0.61
CHKB-203ENST00000464225 TOP2AP11388 1531 aaKnown RBP18.84■□□□□ 0.61
CHKB-203ENST00000464225 DNAJC5Q9H3Z4 198 aa18.84■□□□□ 0.61
CHKB-203ENST00000464225 CFTRP13569 1480 aa18.74■□□□□ 0.59
CHKB-203ENST00000464225 MRC2Q9UBG0 1479 aa18.74■□□□□ 0.59
CHKB-203ENST00000464225 CEP164Q9UPV0 1460 aa18.71■□□□□ 0.59
CHKB-203ENST00000464225 WDR62O43379 1518 aa18.7■□□□□ 0.58
CHKB-203ENST00000464225 FANCD2Q9BXW9 1451 aa18.7■□□□□ 0.58
CHKB-203ENST00000464225 CCDC88BA6NC98 1476 aa18.63■□□□□ 0.57
CHKB-203ENST00000464225 PRDM2Q13029 1718 aa18.56■□□□□ 0.56
CHKB-203ENST00000464225 URB2Q14146 1524 aaKnown RBP18.54■□□□□ 0.56
CHKB-203ENST00000464225 TOPBP1Q92547 1522 aa18.38■□□□□ 0.53
CHKB-203ENST00000464225 DNMBPQ6XZF7 1577 aa18.32■□□□□ 0.52
CHKB-203ENST00000464225 IFT140Q96RY7 1462 aa18.32■□□□□ 0.52
CHKB-203ENST00000464225 ABCC8Q09428 1581 aa18.31■□□□□ 0.52
CHKB-203ENST00000464225 ZNF608Q9ULD9 1512 aaPredicted RBP18.29■□□□□ 0.52
CHKB-203ENST00000464225 SUPT5HO00267 1087 aaKnown RBP18.23■□□□□ 0.51
CHKB-203ENST00000464225 OSCARQ8IYS5 282 aa18.2■□□□□ 0.5
CHKB-203ENST00000464225 EIF4G3O43432 1585 aaKnown RBP18.2■□□□□ 0.5
CHKB-203ENST00000464225 POLA1P09884 1462 aaPredicted RBP18.2■□□□□ 0.5
CHKB-203ENST00000464225 TARBP1Q13395 1621 aaKnown RBP18.2■□□□□ 0.5
CHKB-203ENST00000464225 AQRO60306 1485 aaKnown RBP eCLIP18.14■□□□□ 0.49
CHKB-203ENST00000464225 CUX1P39880 1505 aa18.13■□□□□ 0.49
CHKB-203ENST00000464225 RAD54L2Q9Y4B4 1467 aa18.13■□□□□ 0.49
CHKB-203ENST00000464225 FGD5Q6ZNL6 1462 aa18.11■□□□□ 0.49
CHKB-203ENST00000464225 SOGA1O94964 1423 aa18.1■□□□□ 0.49
CHKB-203ENST00000464225 TRIM41Q8WV44 630 aa18.09■□□□□ 0.49
CHKB-203ENST00000464225 TDRD9Q8NDG6 1382 aaKnown RBP18.04■□□□□ 0.48
CHKB-203ENST00000464225 CHD1O14646 1710 aa18.02■□□□□ 0.48
CHKB-203ENST00000464225 WDR97A6NE52 1622 aa18.01■□□□□ 0.47
CHKB-203ENST00000464225 RIMBP3CA6NJZ7 1639 aa17.98■□□□□ 0.47
CHKB-203ENST00000464225 RIMBP3BA6NNM3 1639 aa17.98■□□□□ 0.47
CHKB-203ENST00000464225 RIMBP3Q9UFD9 1639 aa17.98■□□□□ 0.47
CHKB-203ENST00000464225 SNAPC4Q5SXM2 1469 aa17.97■□□□□ 0.47
CHKB-203ENST00000464225 ARHGEF11O15085 1522 aa17.95■□□□□ 0.46
CHKB-203ENST00000464225 FBLN2P98095 1184 aa17.95■□□□□ 0.46
CHKB-203ENST00000464225 GRIN2BQ13224 1484 aa17.93■□□□□ 0.46
CHKB-203ENST00000464225 MAGI1Q96QZ7 1491 aaPredicted RBP17.92■□□□□ 0.46
CHKB-203ENST00000464225 ABCA10Q8WWZ4 1543 aa17.91■□□□□ 0.46
CHKB-203ENST00000464225 GAPVD1Q14C86 1478 aa17.89■□□□□ 0.45
CHKB-203ENST00000464225 ABCA5Q8WWZ7 1642 aa17.88■□□□□ 0.45
CHKB-203ENST00000464225 WRNQ14191 1432 aaPredicted RBP eCLIP17.88■□□□□ 0.45
CHKB-203ENST00000464225 SYNJ1O43426 1573 aa17.87■□□□□ 0.45
CHKB-203ENST00000464225 TOP2BQ02880 1626 aa17.87■□□□□ 0.45
CHKB-203ENST00000464225 BIVM-ERCC5R4GMW8 1640 aa17.87■□□□□ 0.45
CHKB-203ENST00000464225 PBRM1Q86U86 1689 aa17.87■□□□□ 0.45
CHKB-203ENST00000464225 SYNJ2O15056 1496 aa17.85■□□□□ 0.45
CHKB-203ENST00000464225 CHMP7Q8WUX9 453 aaPredicted RBP17.84■□□□□ 0.45
CHKB-203ENST00000464225 CLASP1Q7Z460 1538 aa17.82■□□□□ 0.44
CHKB-203ENST00000464225 ARAP1Q96P48 1450 aa17.79■□□□□ 0.44
CHKB-203ENST00000464225 CYB5RLQ6IPT4 315 aa17.77■□□□□ 0.44
CHKB-203ENST00000464225 ADAMTS12P58397 1594 aa17.74■□□□□ 0.43
CHKB-203ENST00000464225 GRIN2AQ12879 1464 aa17.71■□□□□ 0.43
CHKB-203ENST00000464225 ERICH3Q5RHP9 1530 aa17.68■□□□□ 0.42
CHKB-203ENST00000464225 FHAD1B1AJZ9 1412 aa17.67■□□□□ 0.42
CHKB-203ENST00000464225 NUP160Q12769 1436 aa17.64■□□□□ 0.42
CHKB-203ENST00000464225 CEP170Q5SW79 1584 aa17.64■□□□□ 0.41
CHKB-203ENST00000464225 ERCC6L2Q5T890 1561 aa17.57■□□□□ 0.4
CHKB-203ENST00000464225 SHROOM2Q13796 1616 aa17.54■□□□□ 0.4
CHKB-203ENST00000464225 KIF27Q86VH2 1401 aa17.52■□□□□ 0.4
CHKB-203ENST00000464225 TRHP20396 242 aaPredicted RBP17.5■□□□□ 0.39
CHKB-203ENST00000464225 IGF1RP08069 1367 aa17.5■□□□□ 0.39
CHKB-203ENST00000464225 RUSC2Q8N2Y8 1516 aa17.48■□□□□ 0.39
CHKB-203ENST00000464225 CUL7Q14999 1698 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms