RNA–Protein interactions for RNA: ENST00000565143.1

PKM-214, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 2,301 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-214ENST00000565143 NISCHQ9Y2I1 1504 aa26.72■■□□□ 1.87
PKM-214ENST00000565143 CCDC180Q9P1Z9 1646 aa22.85■■□□□ 1.25
PKM-214ENST00000565143 ZCCHC6Q5VYS8 1495 aaKnown RBP22.61■■□□□ 1.21
PKM-214ENST00000565143 SHROOM4Q9ULL8 1493 aa22.51■■□□□ 1.19
PKM-214ENST00000565143 SUPT5HO00267 1087 aaKnown RBP22.09■■□□□ 1.13
PKM-214ENST00000565143 DCAF1Q9Y4B6 1507 aa22.05■■□□□ 1.12
PKM-214ENST00000565143 DCAF8L2P0C7V8 631 aa21.94■■□□□ 1.1
PKM-214ENST00000565143 CHIC1Q5VXU3 224 aa21.55■■□□□ 1.04
PKM-214ENST00000565143 MYO15BQ96JP2 1530 aa21.46■■□□□ 1.03
PKM-214ENST00000565143 ABCC9O60706 1549 aa21.33■■□□□ 1
PKM-214ENST00000565143 SCRIBQ14160 1630 aa21.23■□□□□ 0.99
PKM-214ENST00000565143 NACADO15069 1562 aa21.11■□□□□ 0.97
PKM-214ENST00000565143 RSF1Q96T23 1441 aaPredicted RBP21.08■□□□□ 0.97
PKM-214ENST00000565143 RB1CC1Q8TDY2 1594 aa20.91■□□□□ 0.94
PKM-214ENST00000565143 HRCP23327 699 aa20.83■□□□□ 0.93
PKM-214ENST00000565143 LOC105371045A0A1W2PR82 267 aa20.8■□□□□ 0.92
PKM-214ENST00000565143 PCGF6Q9BYE7 350 aa20.76■□□□□ 0.91
PKM-214ENST00000565143 CECR2Q9BXF3 1484 aa20.74■□□□□ 0.91
PKM-214ENST00000565143 MROH2BQ7Z745 1585 aa20.71■□□□□ 0.91
PKM-214ENST00000565143 TRIM41Q8WV44 630 aa20.68■□□□□ 0.9
PKM-214ENST00000565143 WIZO95785 1651 aa20.59■□□□□ 0.89
PKM-214ENST00000565143 BAZ1AQ9NRL2 1556 aaPredicted RBP20.56■□□□□ 0.88
PKM-214ENST00000565143 TRIM26Q12899 539 aaPredicted RBP20.52■□□□□ 0.87
PKM-214ENST00000565143 FAM9AQ8IZU1 332 aaPredicted RBP20.37■□□□□ 0.85
PKM-214ENST00000565143 UNC13AQ9UPW8 1703 aa20.37■□□□□ 0.85
PKM-214ENST00000565143 SMARCA4P51532 1647 aa20.36■□□□□ 0.85
PKM-214ENST00000565143 EIF4G1Q04637 1599 aaKnown RBP20.36■□□□□ 0.85
PKM-214ENST00000565143 TOP2AP11388 1531 aaKnown RBP20.36■□□□□ 0.85
PKM-214ENST00000565143 PPARGC1BQ86YN6 1023 aaKnown RBP20.23■□□□□ 0.83
PKM-214ENST00000565143 SMARCA2P51531 1590 aa20.21■□□□□ 0.83
PKM-214ENST00000565143 CCDC88BA6NC98 1476 aa20.2■□□□□ 0.82
PKM-214ENST00000565143 ZEB1P37275 1124 aaPredicted RBP20.14■□□□□ 0.82
PKM-214ENST00000565143 BICRAQ9NZM4 1560 aa20.11■□□□□ 0.81
PKM-214ENST00000565143 EHMT2Q96KQ7 1210 aa20.09■□□□□ 0.81
PKM-214ENST00000565143 ABCC8Q09428 1581 aa20.07■□□□□ 0.8
PKM-214ENST00000565143 PEG3Q9GZU2 1588 aa20.04■□□□□ 0.8
PKM-214ENST00000565143 PABPN1Q86U42 306 aaKnown RBP eCLIP19.98■□□□□ 0.793e-11■□□□□ 10.4
PKM-214ENST00000565143 EEA1Q15075 1411 aa19.97■□□□□ 0.79
PKM-214ENST00000565143 SOGA1O94964 1423 aa19.88■□□□□ 0.77
PKM-214ENST00000565143 WRNQ14191 1432 aaPredicted RBP eCLIP19.88■□□□□ 0.77
PKM-214ENST00000565143 TNIKQ9UKE5 1360 aa19.86■□□□□ 0.77
PKM-214ENST00000565143 ATAD2BQ9ULI0 1458 aa19.83■□□□□ 0.76
PKM-214ENST00000565143 CSRNP3Q8WYN3 585 aa19.82■□□□□ 0.76
PKM-214ENST00000565143 CEP162Q5TB80 1403 aa19.82■□□□□ 0.76
PKM-214ENST00000565143 BAZ1BQ9UIG0 1483 aaKnown RBP19.78■□□□□ 0.76
PKM-214ENST00000565143 GOLGA3Q08378 1498 aa19.75■□□□□ 0.75
PKM-214ENST00000565143 RUSC2Q8N2Y8 1516 aa19.75■□□□□ 0.75
PKM-214ENST00000565143 SYNJ1O43426 1573 aa19.7■□□□□ 0.74
PKM-214ENST00000565143 UBTFP17480 764 aaKnown RBP19.69■□□□□ 0.74
PKM-214ENST00000565143 CEP164Q9UPV0 1460 aa19.66■□□□□ 0.74
PKM-214ENST00000565143 KIF21BO75037 1637 aa19.65■□□□□ 0.74
PKM-214ENST00000565143 CCER1Q8TC90 406 aaPredicted RBP19.59■□□□□ 0.73
PKM-214ENST00000565143 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.57■□□□□ 0.72
PKM-214ENST00000565143 TOP2BQ02880 1626 aa19.54■□□□□ 0.72
PKM-214ENST00000565143 HMGXB3Q12766 1538 aa19.52■□□□□ 0.72
PKM-214ENST00000565143 NCAPD3P42695 1498 aa19.5■□□□□ 0.71
PKM-214ENST00000565143 BIVM-ERCC5R4GMW8 1640 aa19.49■□□□□ 0.71
PKM-214ENST00000565143 CLIP1P30622 1438 aa19.48■□□□□ 0.71
PKM-214ENST00000565143 TTBK1Q5TCY1 1321 aaPredicted RBP19.46■□□□□ 0.71
PKM-214ENST00000565143 RAPGEF2Q9Y4G8 1499 aa19.42■□□□□ 0.7
PKM-214ENST00000565143 VPS8Q8N3P4 1428 aa19.42■□□□□ 0.7
PKM-214ENST00000565143 ERICH3Q5RHP9 1530 aa19.37■□□□□ 0.69
PKM-214ENST00000565143 APLP2Q06481 763 aa19.31■□□□□ 0.68
PKM-214ENST00000565143 CFTRP13569 1480 aa19.31■□□□□ 0.68
PKM-214ENST00000565143 PRXQ9BXM0 1461 aa19.31■□□□□ 0.68
PKM-214ENST00000565143 CUX1P39880 1505 aa19.3■□□□□ 0.68
PKM-214ENST00000565143 KIF27Q86VH2 1401 aa19.25■□□□□ 0.67
PKM-214ENST00000565143 PRDM2Q13029 1718 aa19.23■□□□□ 0.67
PKM-214ENST00000565143 DIEXFQ68CQ4 756 aaKnown RBP19.19■□□□□ 0.66
PKM-214ENST00000565143 HNRNPUL2Q1KMD3 747 aaKnown RBP19.17■□□□□ 0.66
PKM-214ENST00000565143 ARAP1Q96P48 1450 aa19.17■□□□□ 0.66
PKM-214ENST00000565143 RANGAP1P46060 587 aaPredicted RBP19.15■□□□□ 0.66
PKM-214ENST00000565143 CC2D2AQ9P2K1 1620 aa19.1■□□□□ 0.65
PKM-214ENST00000565143 ZNF316A6NFI3 1004 aaPredicted RBP19.1■□□□□ 0.65
PKM-214ENST00000565143 CADPSQ9ULU8 1353 aa19.09■□□□□ 0.65
PKM-214ENST00000565143 SCAF1Q9H7N4 1312 aaKnown RBP19.08■□□□□ 0.64
PKM-214ENST00000565143 CUX2O14529 1486 aa19.02■□□□□ 0.64
PKM-214ENST00000565143 ACIN1Q9UKV3 1341 aaKnown RBP19.01■□□□□ 0.63
PKM-214ENST00000565143 ARHGAP35Q9NRY4 1499 aa19.01■□□□□ 0.63
PKM-214ENST00000565143 CLSPNQ9HAW4 1339 aa19■□□□□ 0.63
PKM-214ENST00000565143 IGF1RP08069 1367 aa18.99■□□□□ 0.63
PKM-214ENST00000565143 DNAJC5BQ9UF47 199 aa18.99■□□□□ 0.63
PKM-214ENST00000565143 CENPBP07199 599 aaPredicted RBP18.98■□□□□ 0.63
PKM-214ENST00000565143 RRBP1Q9P2E9 1410 aaKnown RBP18.97■□□□□ 0.63
PKM-214ENST00000565143 KANK4Q5T7N3 995 aaPredicted RBP18.97■□□□□ 0.63
PKM-214ENST00000565143 FGD5Q6ZNL6 1462 aa18.96■□□□□ 0.63
PKM-214ENST00000565143 CARMIL1Q5VZK9 1371 aa18.93■□□□□ 0.62
PKM-214ENST00000565143 NEUROD1Q13562 356 aa18.91■□□□□ 0.62
PKM-214ENST00000565143 MAP3K1Q13233 1512 aa18.9■□□□□ 0.62
PKM-214ENST00000565143 DHX57Q6P158 1386 aaKnown RBP18.89■□□□□ 0.61
PKM-214ENST00000565143 FANCD2Q9BXW9 1451 aa18.88■□□□□ 0.61
PKM-214ENST00000565143 CCNB3Q8WWL7 1395 aa18.87■□□□□ 0.61
PKM-214ENST00000565143 DNMBPQ6XZF7 1577 aa18.84■□□□□ 0.61
PKM-214ENST00000565143 TIAM1Q13009 1591 aa18.84■□□□□ 0.61
PKM-214ENST00000565143 PELP1Q8IZL8 1130 aaKnown RBP18.83■□□□□ 0.61
PKM-214ENST00000565143 FHAD1B1AJZ9 1412 aa18.8■□□□□ 0.6
PKM-214ENST00000565143 ABCA10Q8WWZ4 1543 aa18.8■□□□□ 0.6
PKM-214ENST00000565143 TOPBP1Q92547 1522 aa18.77■□□□□ 0.59
PKM-214ENST00000565143 LRRC9Q6ZRR7 1453 aa18.75■□□□□ 0.59
PKM-214ENST00000565143 POLA1P09884 1462 aaPredicted RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms