RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 PELP1Q8IZL8 1130 aaKnown RBP8.51□□□□□ -1.05
SMG1-211ENST00000565324 MYT1Q01538 1121 aa8.22□□□□□ -1.09
SMG1-211ENST00000565324 CCER1Q8TC90 406 aaPredicted RBP8.08□□□□□ -1.12
SMG1-211ENST00000565324 DCAF8L2P0C7V8 631 aa8.05□□□□□ -1.12
SMG1-211ENST00000565324 ERICH6Q7L0X2 663 aa8.01□□□□□ -1.13
SMG1-211ENST00000565324 CENPBP07199 599 aaPredicted RBP7.93□□□□□ -1.14
SMG1-211ENST00000565324 APLP2Q06481 763 aa7.83□□□□□ -1.16
SMG1-211ENST00000565324 YTHDC1Q96MU7 727 aaKnown RBP7.82□□□□□ -1.16
SMG1-211ENST00000565324 SUPT5HO00267 1087 aaKnown RBP7.8□□□□□ -1.16
SMG1-211ENST00000565324 ZEB1P37275 1124 aaPredicted RBP7.8□□□□□ -1.16
SMG1-211ENST00000565324 NEFLP07196 543 aa7.75□□□□□ -1.17
SMG1-211ENST00000565324 FAM9AQ8IZU1 332 aaPredicted RBP7.75□□□□□ -1.17
SMG1-211ENST00000565324 TTBK1Q5TCY1 1321 aaPredicted RBP7.68□□□□□ -1.18
SMG1-211ENST00000565324 DAXXQ9UER7 740 aaPredicted RBP7.63□□□□□ -1.19
SMG1-211ENST00000565324 PCGF6Q9BYE7 350 aa7.57□□□□□ -1.2
SMG1-211ENST00000565324 NISCHQ9Y2I1 1504 aa7.53□□□□□ -1.2
SMG1-211ENST00000565324 EHMT2Q96KQ7 1210 aa7.52□□□□□ -1.21
SMG1-211ENST00000565324 SHROOM4Q9ULL8 1493 aa7.51□□□□□ -1.21
SMG1-211ENST00000565324 RTL5Q5HYW3 569 aaPredicted RBP7.45□□□□□ -1.22
SMG1-211ENST00000565324 ZNF316A6NFI3 1004 aaPredicted RBP7.4□□□□□ -1.22
SMG1-211ENST00000565324 TRIM41Q8WV44 630 aa7.31□□□□□ -1.24
SMG1-211ENST00000565324 GLIPR1L2Q4G1C9 344 aa7.31□□□□□ -1.24
SMG1-211ENST00000565324 TRIM26Q12899 539 aaPredicted RBP7.3□□□□□ -1.24
SMG1-211ENST00000565324 CLSPNQ9HAW4 1339 aa7.28□□□□□ -1.24
SMG1-211ENST00000565324 ATP1B4Q9UN42 357 aaPredicted RBP7.28□□□□□ -1.24
SMG1-211ENST00000565324 UBTFP17480 764 aaKnown RBP7.28□□□□□ -1.24
SMG1-211ENST00000565324 HRCP23327 699 aa7.26□□□□□ -1.25
SMG1-211ENST00000565324 MYT1LQ9UL68 1186 aa7.21□□□□□ -1.26
SMG1-211ENST00000565324 RANGAP1P46060 587 aaPredicted RBP7.19□□□□□ -1.26
SMG1-211ENST00000565324 CDK11AQ9UQ88 783 aaPredicted RBP7.18□□□□□ -1.26
SMG1-211ENST00000565324 ZBTB47Q9UFB7 747 aaPredicted RBP7.17□□□□□ -1.26
SMG1-211ENST00000565324 DIEXFQ68CQ4 756 aaKnown RBP7.16□□□□□ -1.26
SMG1-211ENST00000565324 ANP32BQ92688 251 aaKnown RBP7.16□□□□□ -1.26
SMG1-211ENST00000565324 POLR3GLQ9BT43 218 aa7.14□□□□□ -1.27
SMG1-211ENST00000565324 ANP32AP39687 249 aaKnown RBP7.13□□□□□ -1.27
SMG1-211ENST00000565324 EIF5BO60841 1220 aaKnown RBP7.08□□□□□ -1.28
SMG1-211ENST00000565324 SLC4A1APQ9BWU0 796 aaKnown RBP7.04□□□□□ -1.28
SMG1-211ENST00000565324 GTF3C3Q9Y5Q9 886 aa7.04□□□□□ -1.28
SMG1-211ENST00000565324 NEFMP07197 916 aa7.04□□□□□ -1.28
SMG1-211ENST00000565324 ANP32CO43423 234 aa7.03□□□□□ -1.28
SMG1-211ENST00000565324 UPF2Q9HAU5 1272 aaKnown RBP7.02□□□□□ -1.29
SMG1-211ENST00000565324 CANXP27824 592 aaKnown RBP7□□□□□ -1.29
SMG1-211ENST00000565324 ITGAEP38570 1179 aa7□□□□□ -1.29
SMG1-211ENST00000565324 TNNT2P45379 298 aaPredicted RBP7□□□□□ -1.29
SMG1-211ENST00000565324 HNRNPUL2Q1KMD3 747 aaKnown RBP6.99□□□□□ -1.29
SMG1-211ENST00000565324 PPARGC1BQ86YN6 1023 aaKnown RBP6.99□□□□□ -1.29
SMG1-211ENST00000565324 HSP90AA1P07900 732 aaKnown RBP6.98□□□□□ -1.29
SMG1-211ENST00000565324 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.97□□□□□ -1.29
SMG1-211ENST00000565324 CNGB1Q14028 1251 aaPredicted RBP6.97□□□□□ -1.29
SMG1-211ENST00000565324 BCANQ96GW7 911 aa6.93□□□□□ -1.3
SMG1-211ENST00000565324 ANP32EQ9BTT0 268 aa6.93□□□□□ -1.3
SMG1-211ENST00000565324 ACIN1Q9UKV3 1341 aaKnown RBP6.93□□□□□ -1.3
SMG1-211ENST00000565324 CDK11BP21127 795 aaKnown RBP6.9□□□□□ -1.3
SMG1-211ENST00000565324 TRIM44Q96DX7 344 aaPredicted RBP6.9□□□□□ -1.3
SMG1-211ENST00000565324 FAM50AQ14320 339 aaKnown RBP6.88□□□□□ -1.31
SMG1-211ENST00000565324 NPM2Q86SE8 214 aaKnown RBP6.87□□□□□ -1.31
SMG1-211ENST00000565324 TRIM52Q96A61 297 aa6.87□□□□□ -1.31
SMG1-211ENST00000565324 ERICH6BQ5W0A0 696 aa6.85□□□□□ -1.31
SMG1-211ENST00000565324 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.84□□□□□ -1.31
SMG1-211ENST00000565324 CHIC1Q5VXU3 224 aa6.84□□□□□ -1.31
SMG1-211ENST00000565324 SLC24A1O60721 1099 aa6.83□□□□□ -1.32
SMG1-211ENST00000565324 NCLP19338 710 aaKnown RBP6.83□□□□□ -1.32
SMG1-211ENST00000565324 NEUROD1Q13562 356 aa6.83□□□□□ -1.32
SMG1-211ENST00000565324 DDRGK1Q96HY6 314 aa6.83□□□□□ -1.32
SMG1-211ENST00000565324 BECN1Q14457 450 aa6.83□□□□□ -1.32
SMG1-211ENST00000565324 GOLGA6L22H0YM25 854 aa6.81□□□□□ -1.32
SMG1-211ENST00000565324 FKBP8Q14318 412 aa6.81□□□□□ -1.32
SMG1-211ENST00000565324 LOC105371045A0A1W2PR82 267 aa6.81□□□□□ -1.32
SMG1-211ENST00000565324 NBR1Q14596 966 aa6.8□□□□□ -1.32
SMG1-211ENST00000565324 ZNF326Q5BKZ1 582 aaKnown RBP6.8□□□□□ -1.32
SMG1-211ENST00000565324 BCL11AQ9H165 835 aa6.8□□□□□ -1.32
SMG1-211ENST00000565324 CCDC136Q96JN2 1154 aa6.79□□□□□ -1.32
SMG1-211ENST00000565324 ZRSR1Q15695 479 aaKnown RBP6.77□□□□□ -1.33
SMG1-211ENST00000565324 MYH16Q9H6N6 1097 aa6.77□□□□□ -1.33
SMG1-211ENST00000565324 GOLGA6L6A8MZA4 724 aa6.75□□□□□ -1.33
SMG1-211ENST00000565324 TONSLQ96HA7 1378 aa6.75□□□□□ -1.33
SMG1-211ENST00000565324 DNTTIP2Q5QJE6 756 aaKnown RBP6.74□□□□□ -1.33
SMG1-211ENST00000565324 HNRNPUQ00839 825 aaKnown RBP eCLIP6.74□□□□□ -1.33
SMG1-211ENST00000565324 PTMAP06454 111 aaKnown RBP6.74□□□□□ -1.33
SMG1-211ENST00000565324 ARXQ96QS3 562 aa6.73□□□□□ -1.33
SMG1-211ENST00000565324 PPM1GO15355 546 aaPredicted RBP6.73□□□□□ -1.33
SMG1-211ENST00000565324 NRDCO43847 1150 aa6.72□□□□□ -1.33
SMG1-211ENST00000565324 CHAF1AQ13111 956 aaPredicted RBP6.71□□□□□ -1.33
SMG1-211ENST00000565324 CASC1Q6TDU7 716 aa6.71□□□□□ -1.33
SMG1-211ENST00000565324 TMC1Q8TDI8 760 aa6.71□□□□□ -1.34
SMG1-211ENST00000565324 NAP1L5Q96NT1 182 aaPredicted RBP6.7□□□□□ -1.34
SMG1-211ENST00000565324 DCAF1Q9Y4B6 1507 aa6.7□□□□□ -1.34
SMG1-211ENST00000565324 L1TD1Q5T7N2 865 aaKnown RBP6.69□□□□□ -1.34
SMG1-211ENST00000565324 WDR43Q15061 677 aaKnown RBP eCLIP6.68□□□□□ -1.342e-6■■■■■ 28
SMG1-211ENST00000565324 PTMSP20962 102 aa6.66□□□□□ -1.34
SMG1-211ENST00000565324 FAM9BQ8IZU0 186 aa6.65□□□□□ -1.34
SMG1-211ENST00000565324 CCDC180Q9P1Z9 1646 aa6.65□□□□□ -1.35
SMG1-211ENST00000565324 MSNP26038 577 aaKnown RBP6.64□□□□□ -1.35
SMG1-211ENST00000565324 USP35Q9P2H5 1018 aa6.63□□□□□ -1.35
SMG1-211ENST00000565324 CHMP4BQ9H444 224 aaKnown RBP6.63□□□□□ -1.35
SMG1-211ENST00000565324 CFAP44Q96MT7 982 aa6.62□□□□□ -1.35
SMG1-211ENST00000565324 MRS2Q9HD23 443 aa6.61□□□□□ -1.35
SMG1-211ENST00000565324 ESF1Q9H501 851 aaKnown RBP6.6□□□□□ -1.35
SMG1-211ENST00000565324 NOP58Q9Y2X3 529 aaKnown RBP6.6□□□□□ -1.35
SMG1-211ENST00000565324 DDX10Q13206 875 aaKnown RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms