RNA–Protein interactions for RNA: ENST00000567118.5

PKM-219, Transcript of pyruvate kinase M1/2, humanhuman

TSL 2

Gene PKM, Length 2,254 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-219ENST00000567118 NISCHQ9Y2I1 1504 aa25.48■■□□□ 1.67
PKM-219ENST00000567118 CCDC180Q9P1Z9 1646 aa22.04■■□□□ 1.12
PKM-219ENST00000567118 DCAF8L2P0C7V8 631 aa21.66■■□□□ 1.06
PKM-219ENST00000567118 ABCC9O60706 1549 aa21.46■■□□□ 1.03
PKM-219ENST00000567118 ZCCHC6Q5VYS8 1495 aaKnown RBP21.33■■□□□ 1.01
PKM-219ENST00000567118 SHROOM4Q9ULL8 1493 aa21.18■□□□□ 0.98
PKM-219ENST00000567118 DCAF1Q9Y4B6 1507 aa20.83■□□□□ 0.93
PKM-219ENST00000567118 NACADO15069 1562 aa20.67■□□□□ 0.9
PKM-219ENST00000567118 SCRIBQ14160 1630 aa20.62■□□□□ 0.89
PKM-219ENST00000567118 MYO15BQ96JP2 1530 aa20.59■□□□□ 0.89
PKM-219ENST00000567118 RB1CC1Q8TDY2 1594 aa20.57■□□□□ 0.88
PKM-219ENST00000567118 PABPN1Q86U42 306 aaKnown RBP eCLIP20.38■□□□□ 0.853e-11■□□□□ 10.4
PKM-219ENST00000567118 SUPT5HO00267 1087 aaKnown RBP20.31■□□□□ 0.84
PKM-219ENST00000567118 UNC13AQ9UPW8 1703 aa20.18■□□□□ 0.82
PKM-219ENST00000567118 BICRAQ9NZM4 1560 aa20.03■□□□□ 0.8
PKM-219ENST00000567118 CECR2Q9BXF3 1484 aa20■□□□□ 0.79
PKM-219ENST00000567118 RSF1Q96T23 1441 aaPredicted RBP19.81■□□□□ 0.76
PKM-219ENST00000567118 MROH2BQ7Z745 1585 aa19.79■□□□□ 0.76
PKM-219ENST00000567118 BAZ1AQ9NRL2 1556 aaPredicted RBP19.64■□□□□ 0.73
PKM-219ENST00000567118 WIZO95785 1651 aa19.62■□□□□ 0.73
PKM-219ENST00000567118 SMARCA4P51532 1647 aa19.59■□□□□ 0.73
PKM-219ENST00000567118 EIF4G1Q04637 1599 aaKnown RBP19.46■□□□□ 0.71
PKM-219ENST00000567118 ATAD2BQ9ULI0 1458 aa19.37■□□□□ 0.69
PKM-219ENST00000567118 BAZ1BQ9UIG0 1483 aaKnown RBP19.28■□□□□ 0.68
PKM-219ENST00000567118 TOP2AP11388 1531 aaKnown RBP19.26■□□□□ 0.67
PKM-219ENST00000567118 CC2D2AQ9P2K1 1620 aa19.25■□□□□ 0.67
PKM-219ENST00000567118 SMARCA2P51531 1590 aa19.25■□□□□ 0.67
PKM-219ENST00000567118 PEG3Q9GZU2 1588 aa19.22■□□□□ 0.67
PKM-219ENST00000567118 CCDC88BA6NC98 1476 aa19.22■□□□□ 0.67
PKM-219ENST00000567118 DNAJC5BQ9UF47 199 aa19.2■□□□□ 0.66
PKM-219ENST00000567118 CHIC1Q5VXU3 224 aa19.16■□□□□ 0.66
PKM-219ENST00000567118 NCAPD3P42695 1498 aa19.15■□□□□ 0.66
PKM-219ENST00000567118 HMGXB3Q12766 1538 aa19.02■□□□□ 0.64
PKM-219ENST00000567118 TRIM41Q8WV44 630 aa18.95■□□□□ 0.62
PKM-219ENST00000567118 ABCC8Q09428 1581 aa18.86■□□□□ 0.61
PKM-219ENST00000567118 FAM9AQ8IZU1 332 aaPredicted RBP18.83■□□□□ 0.61
PKM-219ENST00000567118 NESP48681 1621 aa18.79■□□□□ 0.6
PKM-219ENST00000567118 EHMT2Q96KQ7 1210 aa18.77■□□□□ 0.6
PKM-219ENST00000567118 CADPSQ9ULU8 1353 aa18.76■□□□□ 0.59
PKM-219ENST00000567118 CFTRP13569 1480 aa18.73■□□□□ 0.59
PKM-219ENST00000567118 WRNQ14191 1432 aaPredicted RBP eCLIP18.65■□□□□ 0.581e-7■■■■□ 20.9
PKM-219ENST00000567118 LOC105371045A0A1W2PR82 267 aa18.64■□□□□ 0.57
PKM-219ENST00000567118 SYNJ1O43426 1573 aa18.57■□□□□ 0.56
PKM-219ENST00000567118 FANCD2Q9BXW9 1451 aa18.57■□□□□ 0.56
PKM-219ENST00000567118 SOGA1O94964 1423 aa18.51■□□□□ 0.55
PKM-219ENST00000567118 CUX1P39880 1505 aa18.48■□□□□ 0.55
PKM-219ENST00000567118 LAMC3Q9Y6N6 1575 aa18.47■□□□□ 0.55
PKM-219ENST00000567118 RUSC2Q8N2Y8 1516 aa18.47■□□□□ 0.55
PKM-219ENST00000567118 PDS5BQ9NTI5 1447 aa18.45■□□□□ 0.54
PKM-219ENST00000567118 CEP164Q9UPV0 1460 aa18.42■□□□□ 0.54
PKM-219ENST00000567118 PRDM2Q13029 1718 aa18.4■□□□□ 0.54
PKM-219ENST00000567118 TOP2BQ02880 1626 aa18.39■□□□□ 0.53
PKM-219ENST00000567118 KIF21AQ7Z4S6 1674 aa18.39■□□□□ 0.53
PKM-219ENST00000567118 ERCC6Q03468 1493 aa18.37■□□□□ 0.53
PKM-219ENST00000567118 URB2Q14146 1524 aaKnown RBP18.34■□□□□ 0.53
PKM-219ENST00000567118 FGD5Q6ZNL6 1462 aa18.33■□□□□ 0.52
PKM-219ENST00000567118 TOPBP1Q92547 1522 aa18.32■□□□□ 0.52
PKM-219ENST00000567118 RAD54L2Q9Y4B4 1467 aa18.31■□□□□ 0.52
PKM-219ENST00000567118 CSRNP3Q8WYN3 585 aa18.31■□□□□ 0.52
PKM-219ENST00000567118 BIVM-ERCC5R4GMW8 1640 aa18.3■□□□□ 0.52
PKM-219ENST00000567118 POLA1P09884 1462 aaPredicted RBP18.25■□□□□ 0.51
PKM-219ENST00000567118 DNMBPQ6XZF7 1577 aa18.25■□□□□ 0.51
PKM-219ENST00000567118 RANGAP1P46060 587 aaPredicted RBP18.24■□□□□ 0.51
PKM-219ENST00000567118 CUX2O14529 1486 aa18.23■□□□□ 0.51
PKM-219ENST00000567118 UBTFP17480 764 aaKnown RBP18.22■□□□□ 0.51
PKM-219ENST00000567118 TDRD9Q8NDG6 1382 aaKnown RBP18.2■□□□□ 0.5
PKM-219ENST00000567118 MRC2Q9UBG0 1479 aa18.2■□□□□ 0.5
PKM-219ENST00000567118 KIF27Q86VH2 1401 aa18.16■□□□□ 0.5
PKM-219ENST00000567118 HRCP23327 699 aa18.15■□□□□ 0.5
PKM-219ENST00000567118 EEA1Q15075 1411 aa18.11■□□□□ 0.49
PKM-219ENST00000567118 RAPGEF2Q9Y4G8 1499 aa18.08■□□□□ 0.49
PKM-219ENST00000567118 IGF1RP08069 1367 aa18.08■□□□□ 0.48
PKM-219ENST00000567118 AQRO60306 1485 aaKnown RBP eCLIP18.07■□□□□ 0.489e-8■■■■■ 27.1
PKM-219ENST00000567118 PCGF6Q9BYE7 350 aa18.05■□□□□ 0.48
PKM-219ENST00000567118 WDR62O43379 1518 aa18.05■□□□□ 0.48
PKM-219ENST00000567118 ABCA10Q8WWZ4 1543 aa18.05■□□□□ 0.48
PKM-219ENST00000567118 ZNF608Q9ULD9 1512 aaPredicted RBP18.04■□□□□ 0.48
PKM-219ENST00000567118 THOC2Q8NI27 1593 aaKnown RBP18.04■□□□□ 0.48
PKM-219ENST00000567118 GOLGA3Q08378 1498 aa18■□□□□ 0.47
PKM-219ENST00000567118 CARMIL1Q5VZK9 1371 aa18■□□□□ 0.47
PKM-219ENST00000567118 GAPVD1Q14C86 1478 aa17.99■□□□□ 0.47
PKM-219ENST00000567118 TARBP1Q13395 1621 aaKnown RBP17.98■□□□□ 0.47
PKM-219ENST00000567118 PRXQ9BXM0 1461 aa17.96■□□□□ 0.47
PKM-219ENST00000567118 PPARGC1BQ86YN6 1023 aaKnown RBP17.95■□□□□ 0.46
PKM-219ENST00000567118 FBLN2P98095 1184 aa17.94■□□□□ 0.46
PKM-219ENST00000567118 IFT140Q96RY7 1462 aa17.93■□□□□ 0.46
PKM-219ENST00000567118 TNIKQ9UKE5 1360 aa17.92■□□□□ 0.46
PKM-219ENST00000567118 CEP162Q5TB80 1403 aa17.91■□□□□ 0.46
PKM-219ENST00000567118 WDR97A6NE52 1622 aa17.91■□□□□ 0.46
PKM-219ENST00000567118 KIF21BO75037 1637 aa17.91■□□□□ 0.46
PKM-219ENST00000567118 ABCA5Q8WWZ7 1642 aa17.88■□□□□ 0.45
PKM-219ENST00000567118 TTBK1Q5TCY1 1321 aaPredicted RBP17.87■□□□□ 0.45
PKM-219ENST00000567118 P3H3Q8IVL6 736 aa17.86■□□□□ 0.45
PKM-219ENST00000567118 EIF4G3O43432 1585 aaKnown RBP17.82■□□□□ 0.44
PKM-219ENST00000567118 GRIN2BQ13224 1484 aa17.81■□□□□ 0.44
PKM-219ENST00000567118 CLIP1P30622 1438 aa17.8■□□□□ 0.44
PKM-219ENST00000567118 ERICH3Q5RHP9 1530 aa17.8■□□□□ 0.44
PKM-219ENST00000567118 CHMP7Q8WUX9 453 aaPredicted RBP17.8■□□□□ 0.44
PKM-219ENST00000567118 SNAPC4Q5SXM2 1469 aa17.79■□□□□ 0.44
PKM-219ENST00000567118 PBRM1Q86U86 1689 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms