RNA–Protein interactions for RNA: ENST00000452668.1

CHKB-CPT1B-201, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 4

Gene CHKB-CPT1B, Length 546 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-201ENST00000452668 NISCHQ9Y2I1 1504 aa29.45■■■□□ 2.3
CHKB-CPT1B-201ENST00000452668 ABCC9O60706 1549 aa26.48■■□□□ 1.83
CHKB-CPT1B-201ENST00000452668 CCDC180Q9P1Z9 1646 aa26.41■■□□□ 1.82
CHKB-CPT1B-201ENST00000452668 RB1CC1Q8TDY2 1594 aa25.22■■□□□ 1.63
CHKB-CPT1B-201ENST00000452668 DCAF8L2P0C7V8 631 aa25.07■■□□□ 1.6
CHKB-CPT1B-201ENST00000452668 NACADO15069 1562 aa25.03■■□□□ 1.6
CHKB-CPT1B-201ENST00000452668 DNAJC5BQ9UF47 199 aa24.76■■□□□ 1.55
CHKB-CPT1B-201ENST00000452668 PABPN1Q86U42 306 aaKnown RBP eCLIP24.68■■□□□ 1.541e-6■□□□□ 10.4
CHKB-CPT1B-201ENST00000452668 MYO15BQ96JP2 1530 aa24.65■■□□□ 1.54
CHKB-CPT1B-201ENST00000452668 UNC13AQ9UPW8 1703 aa24.47■■□□□ 1.51
CHKB-CPT1B-201ENST00000452668 ZCCHC6Q5VYS8 1495 aaKnown RBP24.38■■□□□ 1.49
CHKB-CPT1B-201ENST00000452668 BICRAQ9NZM4 1560 aa24.33■■□□□ 1.49
CHKB-CPT1B-201ENST00000452668 DCAF1Q9Y4B6 1507 aa24.31■■□□□ 1.48
CHKB-CPT1B-201ENST00000452668 SHROOM4Q9ULL8 1493 aa24.15■■□□□ 1.46
CHKB-CPT1B-201ENST00000452668 SCRIBQ14160 1630 aa24.1■■□□□ 1.45
CHKB-CPT1B-201ENST00000452668 CC2D2AQ9P2K1 1620 aa23.88■■□□□ 1.41
CHKB-CPT1B-201ENST00000452668 CECR2Q9BXF3 1484 aa23.87■■□□□ 1.41
CHKB-CPT1B-201ENST00000452668 EIF4G1Q04637 1599 aaKnown RBP23.82■■□□□ 1.4
CHKB-CPT1B-201ENST00000452668 NCAPD3P42695 1498 aa23.08■■□□□ 1.29
CHKB-CPT1B-201ENST00000452668 ATAD2BQ9ULI0 1458 aa23■■□□□ 1.27
CHKB-CPT1B-201ENST00000452668 SMARCA2P51531 1590 aa23■■□□□ 1.27
CHKB-CPT1B-201ENST00000452668 ERCC6Q03468 1493 aa22.97■■□□□ 1.27
CHKB-CPT1B-201ENST00000452668 SMARCA4P51532 1647 aa22.96■■□□□ 1.27
CHKB-CPT1B-201ENST00000452668 HMGXB3Q12766 1538 aa22.91■■□□□ 1.26
CHKB-CPT1B-201ENST00000452668 BAZ1AQ9NRL2 1556 aaPredicted RBP22.9■■□□□ 1.26
CHKB-CPT1B-201ENST00000452668 CUX2O14529 1486 aa22.85■■□□□ 1.25
CHKB-CPT1B-201ENST00000452668 DNAJC5Q9H3Z4 198 aa22.85■■□□□ 1.25
CHKB-CPT1B-201ENST00000452668 BAZ1BQ9UIG0 1483 aaKnown RBP22.85■■□□□ 1.25
CHKB-CPT1B-201ENST00000452668 PEG3Q9GZU2 1588 aa22.71■■□□□ 1.23
CHKB-CPT1B-201ENST00000452668 NESP48681 1621 aa22.68■■□□□ 1.22
CHKB-CPT1B-201ENST00000452668 MROH2BQ7Z745 1585 aa22.66■■□□□ 1.22
CHKB-CPT1B-201ENST00000452668 LAMC3Q9Y6N6 1575 aa22.59■■□□□ 1.21
CHKB-CPT1B-201ENST00000452668 PDS5BQ9NTI5 1447 aa22.54■■□□□ 1.2
CHKB-CPT1B-201ENST00000452668 THOC2Q8NI27 1593 aaKnown RBP22.42■■□□□ 1.18
CHKB-CPT1B-201ENST00000452668 CADPSQ9ULU8 1353 aa22.42■■□□□ 1.18
CHKB-CPT1B-201ENST00000452668 WIZO95785 1651 aa22.38■■□□□ 1.17
CHKB-CPT1B-201ENST00000452668 KIF21AQ7Z4S6 1674 aa22.37■■□□□ 1.17
CHKB-CPT1B-201ENST00000452668 MRC2Q9UBG0 1479 aa22.28■■□□□ 1.16
CHKB-CPT1B-201ENST00000452668 RSF1Q96T23 1441 aaPredicted RBP22.22■■□□□ 1.15
CHKB-CPT1B-201ENST00000452668 CEP164Q9UPV0 1460 aa22.22■■□□□ 1.15
CHKB-CPT1B-201ENST00000452668 WDR62O43379 1518 aa22.16■■□□□ 1.14
CHKB-CPT1B-201ENST00000452668 FANCD2Q9BXW9 1451 aa22.16■■□□□ 1.14
CHKB-CPT1B-201ENST00000452668 TOP2AP11388 1531 aaKnown RBP22.15■■□□□ 1.14
CHKB-CPT1B-201ENST00000452668 CFTRP13569 1480 aa22.12■■□□□ 1.13
CHKB-CPT1B-201ENST00000452668 TRIM41Q8WV44 630 aa21.94■■□□□ 1.1
CHKB-CPT1B-201ENST00000452668 URB2Q14146 1524 aaKnown RBP21.91■■□□□ 1.1
CHKB-CPT1B-201ENST00000452668 CCDC88BA6NC98 1476 aa21.9■■□□□ 1.1
CHKB-CPT1B-201ENST00000452668 OSCARQ8IYS5 282 aa21.89■■□□□ 1.09
CHKB-CPT1B-201ENST00000452668 PRDM2Q13029 1718 aa21.84■■□□□ 1.09
CHKB-CPT1B-201ENST00000452668 IFT140Q96RY7 1462 aa21.77■■□□□ 1.07
CHKB-CPT1B-201ENST00000452668 ABCC8Q09428 1581 aa21.76■■□□□ 1.07
CHKB-CPT1B-201ENST00000452668 TOPBP1Q92547 1522 aa21.71■■□□□ 1.07
CHKB-CPT1B-201ENST00000452668 ZNF608Q9ULD9 1512 aaPredicted RBP21.65■■□□□ 1.06
CHKB-CPT1B-201ENST00000452668 DNMBPQ6XZF7 1577 aa21.64■■□□□ 1.05
CHKB-CPT1B-201ENST00000452668 EIF4G3O43432 1585 aaKnown RBP21.53■■□□□ 1.04
CHKB-CPT1B-201ENST00000452668 FBLN2P98095 1184 aa21.51■■□□□ 1.03
CHKB-CPT1B-201ENST00000452668 AQRO60306 1485 aaKnown RBP eCLIP21.5■■□□□ 1.03
CHKB-CPT1B-201ENST00000452668 POLA1P09884 1462 aaPredicted RBP21.48■■□□□ 1.03
CHKB-CPT1B-201ENST00000452668 RIMBP3CA6NJZ7 1639 aa21.46■■□□□ 1.03
CHKB-CPT1B-201ENST00000452668 RIMBP3BA6NNM3 1639 aa21.46■■□□□ 1.03
CHKB-CPT1B-201ENST00000452668 TARBP1Q13395 1621 aaKnown RBP21.46■■□□□ 1.03
CHKB-CPT1B-201ENST00000452668 RIMBP3Q9UFD9 1639 aa21.46■■□□□ 1.03
CHKB-CPT1B-201ENST00000452668 SOGA1O94964 1423 aa21.46■■□□□ 1.03
CHKB-CPT1B-201ENST00000452668 ARHGEF11O15085 1522 aa21.42■■□□□ 1.02
CHKB-CPT1B-201ENST00000452668 RAD54L2Q9Y4B4 1467 aa21.4■■□□□ 1.02
CHKB-CPT1B-201ENST00000452668 TDRD9Q8NDG6 1382 aaKnown RBP21.39■■□□□ 1.02
CHKB-CPT1B-201ENST00000452668 SUPT5HO00267 1087 aaKnown RBP21.38■■□□□ 1.01
CHKB-CPT1B-201ENST00000452668 CYB5RLQ6IPT4 315 aa21.37■■□□□ 1.01
CHKB-CPT1B-201ENST00000452668 FGD5Q6ZNL6 1462 aa21.37■■□□□ 1.01
CHKB-CPT1B-201ENST00000452668 CHD1O14646 1710 aa21.35■■□□□ 1.01
CHKB-CPT1B-201ENST00000452668 CHMP7Q8WUX9 453 aaPredicted RBP21.34■■□□□ 1.01
CHKB-CPT1B-201ENST00000452668 WDR97A6NE52 1622 aa21.33■■□□□ 1
CHKB-CPT1B-201ENST00000452668 CUX1P39880 1505 aa21.29■■□□□ 1
CHKB-CPT1B-201ENST00000452668 SNAPC4Q5SXM2 1469 aa21.29■■□□□ 1
CHKB-CPT1B-201ENST00000452668 GRIN2BQ13224 1484 aa21.26■□□□□ 0.99
CHKB-CPT1B-201ENST00000452668 MAGI1Q96QZ7 1491 aaPredicted RBP21.26■□□□□ 0.99
CHKB-CPT1B-201ENST00000452668 TRHP20396 242 aaPredicted RBP21.22■□□□□ 0.99
CHKB-CPT1B-201ENST00000452668 SYNJ1O43426 1573 aa21.2■□□□□ 0.98
CHKB-CPT1B-201ENST00000452668 SYNJ2O15056 1496 aa21.18■□□□□ 0.98
CHKB-CPT1B-201ENST00000452668 GAPVD1Q14C86 1478 aa21.18■□□□□ 0.98
CHKB-CPT1B-201ENST00000452668 ARAP1Q96P48 1450 aa21.18■□□□□ 0.98
CHKB-CPT1B-201ENST00000452668 ABCA10Q8WWZ4 1543 aa21.12■□□□□ 0.97
CHKB-CPT1B-201ENST00000452668 CLASP1Q7Z460 1538 aa21.11■□□□□ 0.97
CHKB-CPT1B-201ENST00000452668 WRNQ14191 1432 aaPredicted RBP eCLIP21.11■□□□□ 0.97
CHKB-CPT1B-201ENST00000452668 PBRM1Q86U86 1689 aa21.09■□□□□ 0.97
CHKB-CPT1B-201ENST00000452668 ABCA5Q8WWZ7 1642 aa21.04■□□□□ 0.96
CHKB-CPT1B-201ENST00000452668 TOP2BQ02880 1626 aa20.97■□□□□ 0.95
CHKB-CPT1B-201ENST00000452668 GRIN2AQ12879 1464 aa20.95■□□□□ 0.94
CHKB-CPT1B-201ENST00000452668 BIVM-ERCC5R4GMW8 1640 aa20.95■□□□□ 0.94
CHKB-CPT1B-201ENST00000452668 FHAD1B1AJZ9 1412 aa20.92■□□□□ 0.94
CHKB-CPT1B-201ENST00000452668 ADAMTS12P58397 1594 aa20.89■□□□□ 0.94
CHKB-CPT1B-201ENST00000452668 ERICH3Q5RHP9 1530 aa20.87■□□□□ 0.93
CHKB-CPT1B-201ENST00000452668 NUP160Q12769 1436 aa20.86■□□□□ 0.93
CHKB-CPT1B-201ENST00000452668 CEP170Q5SW79 1584 aa20.82■□□□□ 0.92
CHKB-CPT1B-201ENST00000452668 ERCC6L2Q5T890 1561 aa20.75■□□□□ 0.91
CHKB-CPT1B-201ENST00000452668 JPH4Q96JJ6 628 aa20.74■□□□□ 0.91
CHKB-CPT1B-201ENST00000452668 PRG4Q92954 1404 aaPredicted RBP20.73■□□□□ 0.91
CHKB-CPT1B-201ENST00000452668 SHROOM2Q13796 1616 aa20.71■□□□□ 0.91
CHKB-CPT1B-201ENST00000452668 NPM1P06748 294 aaKnown RBP eCLIP20.68■□□□□ 0.9
CHKB-CPT1B-201ENST00000452668 KIF27Q86VH2 1401 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms