RNA–Protein interactions for RNA: ENST00000565184.5

PKM-216, Transcript of pyruvate kinase M1/2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKM, Length 2,503 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-216ENST00000565184 NISCHQ9Y2I1 1504 aa37■■■■□ 3.51
PKM-216ENST00000565184 CCDC180Q9P1Z9 1646 aa31.89■■■□□ 2.7
PKM-216ENST00000565184 ZCCHC6Q5VYS8 1495 aaKnown RBP31.16■■■□□ 2.58
PKM-216ENST00000565184 SHROOM4Q9ULL8 1493 aa30.74■■■□□ 2.51
PKM-216ENST00000565184 DCAF8L2P0C7V8 631 aa30.58■■■□□ 2.49
PKM-216ENST00000565184 DCAF1Q9Y4B6 1507 aa30.49■■■□□ 2.47
PKM-216ENST00000565184 ABCC9O60706 1549 aa29.93■■■□□ 2.38
PKM-216ENST00000565184 MYO15BQ96JP2 1530 aa29.91■■■□□ 2.38
PKM-216ENST00000565184 SUPT5HO00267 1087 aaKnown RBP29.82■■■□□ 2.36
PKM-216ENST00000565184 NACADO15069 1562 aa29.63■■■□□ 2.33
PKM-216ENST00000565184 SCRIBQ14160 1630 aa29.58■■■□□ 2.33
PKM-216ENST00000565184 RB1CC1Q8TDY2 1594 aa29.27■■■□□ 2.28
PKM-216ENST00000565184 RSF1Q96T23 1441 aaPredicted RBP28.96■■■□□ 2.23
PKM-216ENST00000565184 CECR2Q9BXF3 1484 aa28.82■■■□□ 2.2
PKM-216ENST00000565184 CHIC1Q5VXU3 224 aa28.77■■■□□ 2.2
PKM-216ENST00000565184 UNC13AQ9UPW8 1703 aa28.73■■■□□ 2.19
PKM-216ENST00000565184 MROH2BQ7Z745 1585 aa28.67■■■□□ 2.18
PKM-216ENST00000565184 BAZ1AQ9NRL2 1556 aaPredicted RBP28.48■■■□□ 2.15
PKM-216ENST00000565184 BICRAQ9NZM4 1560 aa28.47■■■□□ 2.15
PKM-216ENST00000565184 WIZO95785 1651 aa28.45■■■□□ 2.15
PKM-216ENST00000565184 PABPN1Q86U42 306 aaKnown RBP eCLIP28.41■■■□□ 2.143e-11■□□□□ 10.4
PKM-216ENST00000565184 SMARCA4P51532 1647 aa28.32■■■□□ 2.12
PKM-216ENST00000565184 TOP2AP11388 1531 aaKnown RBP28.09■■■□□ 2.09
PKM-216ENST00000565184 TRIM41Q8WV44 630 aa27.92■■■□□ 2.06
PKM-216ENST00000565184 CCDC88BA6NC98 1476 aa27.9■■■□□ 2.06
PKM-216ENST00000565184 PEG3Q9GZU2 1588 aa27.89■■■□□ 2.06
PKM-216ENST00000565184 SMARCA2P51531 1590 aa27.88■■■□□ 2.05
PKM-216ENST00000565184 EIF4G1Q04637 1599 aaKnown RBP27.85■■■□□ 2.05
PKM-216ENST00000565184 LOC105371045A0A1W2PR82 267 aa27.78■■■□□ 2.04
PKM-216ENST00000565184 ATAD2BQ9ULI0 1458 aa27.76■■■□□ 2.04
PKM-216ENST00000565184 BAZ1BQ9UIG0 1483 aaKnown RBP27.62■■■□□ 2.01
PKM-216ENST00000565184 FAM9AQ8IZU1 332 aaPredicted RBP27.54■■■□□ 2
PKM-216ENST00000565184 ABCC8Q09428 1581 aa27.51■■□□□ 1.99
PKM-216ENST00000565184 NCAPD3P42695 1498 aa27.4■■□□□ 1.98
PKM-216ENST00000565184 HMGXB3Q12766 1538 aa27.35■■□□□ 1.97
PKM-216ENST00000565184 WRNQ14191 1432 aaPredicted RBP eCLIP27.21■■□□□ 1.951e-7■■■■□ 20.9
PKM-216ENST00000565184 EHMT2Q96KQ7 1210 aa27.21■■□□□ 1.95
PKM-216ENST00000565184 SOGA1O94964 1423 aa27.13■■□□□ 1.93
PKM-216ENST00000565184 SYNJ1O43426 1573 aa27.1■■□□□ 1.93
PKM-216ENST00000565184 CC2D2AQ9P2K1 1620 aa27.02■■□□□ 1.92
PKM-216ENST00000565184 RUSC2Q8N2Y8 1516 aa27.02■■□□□ 1.92
PKM-216ENST00000565184 PCGF6Q9BYE7 350 aa27■■□□□ 1.91
PKM-216ENST00000565184 EEA1Q15075 1411 aa27■■□□□ 1.91
PKM-216ENST00000565184 CFTRP13569 1480 aa26.95■■□□□ 1.91
PKM-216ENST00000565184 CSRNP3Q8WYN3 585 aa26.94■■□□□ 1.9
PKM-216ENST00000565184 TOP2BQ02880 1626 aa26.89■■□□□ 1.89
PKM-216ENST00000565184 BIVM-ERCC5R4GMW8 1640 aa26.82■■□□□ 1.88
PKM-216ENST00000565184 TRIM26Q12899 539 aaPredicted RBP26.79■■□□□ 1.88
PKM-216ENST00000565184 CADPSQ9ULU8 1353 aa26.77■■□□□ 1.88
PKM-216ENST00000565184 CUX1P39880 1505 aa26.76■■□□□ 1.87
PKM-216ENST00000565184 TNIKQ9UKE5 1360 aa26.75■■□□□ 1.87
PKM-216ENST00000565184 GOLGA3Q08378 1498 aa26.72■■□□□ 1.87
PKM-216ENST00000565184 PRDM2Q13029 1718 aa26.72■■□□□ 1.87
PKM-216ENST00000565184 CEP162Q5TB80 1403 aa26.67■■□□□ 1.86
PKM-216ENST00000565184 UBTFP17480 764 aaKnown RBP26.67■■□□□ 1.86
PKM-216ENST00000565184 CEP164Q9UPV0 1460 aa26.66■■□□□ 1.86
PKM-216ENST00000565184 KIF21BO75037 1637 aa26.65■■□□□ 1.86
PKM-216ENST00000565184 HRCP23327 699 aa26.6■■□□□ 1.85
PKM-216ENST00000565184 RAPGEF2Q9Y4G8 1499 aa26.51■■□□□ 1.83
PKM-216ENST00000565184 FANCD2Q9BXW9 1451 aa26.48■■□□□ 1.83
PKM-216ENST00000565184 PPARGC1BQ86YN6 1023 aaKnown RBP26.48■■□□□ 1.83
PKM-216ENST00000565184 NESP48681 1621 aa26.46■■□□□ 1.83
PKM-216ENST00000565184 KIF27Q86VH2 1401 aa26.45■■□□□ 1.83
PKM-216ENST00000565184 PRXQ9BXM0 1461 aa26.42■■□□□ 1.82
PKM-216ENST00000565184 DNAJC5BQ9UF47 199 aa26.41■■□□□ 1.82
PKM-216ENST00000565184 FGD5Q6ZNL6 1462 aa26.37■■□□□ 1.81
PKM-216ENST00000565184 ERICH3Q5RHP9 1530 aa26.36■■□□□ 1.81
PKM-216ENST00000565184 CLIP1P30622 1438 aa26.34■■□□□ 1.81
PKM-216ENST00000565184 LAMC3Q9Y6N6 1575 aa26.33■■□□□ 1.81
PKM-216ENST00000565184 CUX2O14529 1486 aa26.32■■□□□ 1.8
PKM-216ENST00000565184 DNMBPQ6XZF7 1577 aa26.29■■□□□ 1.8
PKM-216ENST00000565184 TOPBP1Q92547 1522 aa26.25■■□□□ 1.79
PKM-216ENST00000565184 IGF1RP08069 1367 aa26.23■■□□□ 1.79
PKM-216ENST00000565184 RANGAP1P46060 587 aaPredicted RBP26.2■■□□□ 1.78
PKM-216ENST00000565184 POLA1P09884 1462 aaPredicted RBP26.17■■□□□ 1.78
PKM-216ENST00000565184 VPS8Q8N3P4 1428 aa26.16■■□□□ 1.78
PKM-216ENST00000565184 PDS5BQ9NTI5 1447 aa26.16■■□□□ 1.78
PKM-216ENST00000565184 RAD54L2Q9Y4B4 1467 aa26.16■■□□□ 1.78
PKM-216ENST00000565184 TTBK1Q5TCY1 1321 aaPredicted RBP26.15■■□□□ 1.78
PKM-216ENST00000565184 URB2Q14146 1524 aaKnown RBP26.15■■□□□ 1.78
PKM-216ENST00000565184 ABCA10Q8WWZ4 1543 aa26.11■■□□□ 1.77
PKM-216ENST00000565184 CARMIL1Q5VZK9 1371 aa26.09■■□□□ 1.77
PKM-216ENST00000565184 KIF21AQ7Z4S6 1674 aa26.04■■□□□ 1.76
PKM-216ENST00000565184 ARAP1Q96P48 1450 aa26.04■■□□□ 1.76
PKM-216ENST00000565184 WDR97A6NE52 1622 aa25.94■■□□□ 1.74
PKM-216ENST00000565184 ARHGAP35Q9NRY4 1499 aa25.93■■□□□ 1.74
PKM-216ENST00000565184 APLP2Q06481 763 aa25.93■■□□□ 1.74
PKM-216ENST00000565184 ZEB1P37275 1124 aaPredicted RBP25.91■■□□□ 1.74
PKM-216ENST00000565184 TDRD9Q8NDG6 1382 aaKnown RBP25.87■■□□□ 1.73
PKM-216ENST00000565184 CUL7Q14999 1698 aa25.85■■□□□ 1.73
PKM-216ENST00000565184 ABCA5Q8WWZ7 1642 aa25.84■■□□□ 1.73
PKM-216ENST00000565184 MRC2Q9UBG0 1479 aa25.8■■□□□ 1.72
PKM-216ENST00000565184 GAPVD1Q14C86 1478 aa25.8■■□□□ 1.72
PKM-216ENST00000565184 TARBP1Q13395 1621 aaKnown RBP25.8■■□□□ 1.72
PKM-216ENST00000565184 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.77■■□□□ 1.72
PKM-216ENST00000565184 KANK4Q5T7N3 995 aaPredicted RBP25.72■■□□□ 1.71
PKM-216ENST00000565184 CCER1Q8TC90 406 aaPredicted RBP25.68■■□□□ 1.7
PKM-216ENST00000565184 CTTNBP2Q8WZ74 1663 aa25.64■■□□□ 1.7
PKM-216ENST00000565184 WDR62O43379 1518 aa25.63■■□□□ 1.69
PKM-216ENST00000565184 P3H3Q8IVL6 736 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms