Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 HNRNPC-202ENST00000420743 1559 ntTSL 2 BASIC11.16□□□□□ -0.621e-8■■■□□ 14.8
SRSF1Q07955 HNRNPC-231ENST00000557336 580 ntTSL 311□□□□□ -0.651e-8■■■□□ 14.8
SRSF1Q07955 HNRNPC-230ENST00000557201 1371 ntTSL 1 (best) BASIC10.65□□□□□ -0.711e-8■■■□□ 14.8
SRSF1Q07955 HNRNPC-213ENST00000554891 644 ntTSL 510.21□□□□□ -0.771e-8■■■□□ 14.8
SRSF1Q07955 HNRNPC-218ENST00000555215 781 ntTSL 59.97□□□□□ -0.811e-8■■■□□ 14.8
SRSF1Q07955 HNRNPC-209ENST00000554383 1039 ntTSL 59.97□□□□□ -0.811e-8■■■□□ 14.8
SRSF1Q07955 HNRNPC-214ENST00000554969 1924 ntAPPRIS P2 TSL 5 BASIC9.97□□□□□ -0.811e-8■■■□□ 14.8
SRSF1Q07955 HNRNPC-224ENST00000556226 629 ntTSL 59.67□□□□□ -0.861e-8■■■□□ 14.8
SRSF1Q07955 HNRNPC-216ENST00000555137 789 ntTSL 39.67□□□□□ -0.861e-8■■■□□ 14.8
SRSF1Q07955 HNRNPC-225ENST00000556513 1403 ntTSL 5 BASIC9.65□□□□□ -0.871e-8■■■□□ 14.8
SRSF1Q07955 HNRNPC-232ENST00000557442 1308 ntTSL 29.63□□□□□ -0.871e-8■■■□□ 14.8
SRSF1Q07955 HNRNPC-208ENST00000553753 1790 ntTSL 5 BASIC9.52□□□□□ -0.881e-8■■■□□ 14.8
SRSF1Q07955 HNRNPC-219ENST00000555309 1714 ntTSL 5 BASIC9.48□□□□□ -0.891e-8■■■□□ 14.8
SRSF1Q07955 HNRNPC-207ENST00000553614 604 ntTSL 59.19□□□□□ -0.941e-8■■■□□ 14.8
SRSF1Q07955 HNRNPC-227ENST00000556897 1252 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.941e-8■■■□□ 14.8
SRSF1Q07955 HNRNPC-212ENST00000554539 748 ntTSL 58.8□□□□□ -11e-8■■■□□ 14.8
SRSF1Q07955 HNRNPC-222ENST00000555914 1658 ntAPPRIS ALT1 TSL 5 BASIC8.65□□□□□ -1.031e-8■■■□□ 14.8
SRSF1Q07955 HNRNPC-223ENST00000556142 1599 ntTSL 5 BASIC8.4□□□□□ -1.061e-8■■■□□ 14.8
SRSF1Q07955 HNRNPC-211ENST00000554455 1784 ntTSL 1 (best) BASIC7.46□□□□□ -1.211e-8■■■□□ 14.8
SRSF1Q07955 HNRNPC-226ENST00000556628 1156 ntTSL 1 (best) BASIC7.29□□□□□ -1.241e-8■■■□□ 14.8
SRSF1Q07955 HNRNPC-201ENST00000336053 3301 ntTSL 2 BASIC6.97□□□□□ -1.291e-8■■■□□ 14.8
SRSF1Q07955 HNRNPC-233ENST00000557768 599 ntTSL 35.39□□□□□ -1.551e-8■■■□□ 14.8
SRSF1Q07955 HNRNPC-217ENST00000555176 531 ntTSL 53.28□□□□□ -1.881e-8■■■□□ 14.8
SRSF1Q07955 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.951e-8■■■□□ 14.8
SRSF1Q07955 SUPT5H-207ENST00000594990 558 ntTSL 515.89■□□□□ 0.131e-8■■■□□ 14.8
SRSF1Q07955 USP48-214ENST00000532737 680 ntTSL 422.71■■□□□ 1.233e-8■■■□□ 14.8
SRSF1Q07955 USP48-205ENST00000421625 2818 ntTSL 2 BASIC16.43■□□□□ 0.223e-8■■■□□ 14.8
SRSF1Q07955 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.717e-7■■■□□ 14.8
SRSF1Q07955 ARHGEF10L-204ENST00000375415 4035 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.037e-7■■■□□ 14.8
SRSF1Q07955 SUN1-207ENST00000419312 473 ntTSL 414.98□□□□□ -0.012e-6■■■□□ 14.8
SRSF1Q07955 LEPR-204ENST00000371059 3079 ntTSL 1 (best) BASIC9.46□□□□□ -0.896e-7■■■□□ 14.8
SRSF1Q07955 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.42□□□□□ -1.546e-7■■■□□ 14.8
SRSF1Q07955 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.966e-7■■■□□ 14.8
SRSF1Q07955 DYRK1A-207ENST00000462274 1189 ntTSL 1 (best)24.44■■□□□ 1.58e-7■■■□□ 14.8
SRSF1Q07955 PRODH2-206ENST00000591694 728 ntTSL 315.87■□□□□ 0.137e-9■■■□□ 14.8
SRSF1Q07955 NKD1-202ENST00000564336 477 ntTSL 321.55■■□□□ 1.048e-7■■■□□ 14.8
SRSF1Q07955 ARAP1-211ENST00000495878 2758 ntTSL 1 (best)9.92□□□□□ -0.827e-8■■■□□ 14.8
SRSF1Q07955 ARAP1-209ENST00000455638 2683 ntTSL 5 BASIC9.79□□□□□ -0.847e-8■■■□□ 14.8
SRSF1Q07955 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.113e-8■■■□□ 14.8
SRSF1Q07955 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC14.6□□□□□ -0.073e-8■■■□□ 14.8
SRSF1Q07955 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC10.95□□□□□ -0.663e-8■■■□□ 14.8
SRSF1Q07955 SHC1-201ENST00000366442 780 ntTSL 322.39■■□□□ 1.179e-9■■■□□ 14.8
SRSF1Q07955 SHC1-206ENST00000412170 692 ntTSL 522.39■■□□□ 1.179e-9■■■□□ 14.8
SRSF1Q07955 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.539e-9■■■□□ 14.8
SRSF1Q07955 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.539e-9■■■□□ 14.8
SRSF1Q07955 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.719e-9■■■□□ 14.8
SRSF1Q07955 SHC1-210ENST00000448116 3481 ntAPPRIS ALT1 TSL 1 (best) BASIC9.84□□□□□ -0.839e-9■■■□□ 14.8
SRSF1Q07955 SHC1-203ENST00000368449 2879 ntTSL 5 BASIC9.58□□□□□ -0.889e-9■■■□□ 14.8
SRSF1Q07955 SLC25A37-209ENST00000521637 503 ntTSL 315.66■□□□□ 0.15e-15■■■□□ 14.8
SRSF1Q07955 SLC25A37-210ENST00000522164 571 ntTSL 215.05■□□□□ -05e-15■■■□□ 14.8
SRSF1Q07955 RHOT2-202ENST00000561711 644 ntTSL 321.51■■□□□ 1.034e-7■■■□□ 14.8
SRSF1Q07955 RHOT2-221ENST00000569358 1273 ntTSL 519.94■□□□□ 0.784e-7■■■□□ 14.8
SRSF1Q07955 RHOT2-213ENST00000565004 1014 ntTSL 515.5■□□□□ 0.074e-7■■■□□ 14.8
SRSF1Q07955 RHOT2-218ENST00000568636 3098 ntTSL 212.6□□□□□ -0.394e-7■■■□□ 14.8
SRSF1Q07955 TFRC-210ENST00000465288 560 ntTSL 57.97□□□□□ -1.132e-6■■■□□ 14.8
SRSF1Q07955 TFRC-211ENST00000475593 875 ntTSL 36.53□□□□□ -1.362e-6■■■□□ 14.8
SRSF1Q07955 TFRC-212ENST00000477148 570 ntTSL 46.32□□□□□ -1.42e-6■■■□□ 14.8
SRSF1Q07955 STK36-215ENST00000486644 730 ntTSL 514.72□□□□□ -0.059e-8■■■□□ 14.8
SRSF1Q07955 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.25□□□□□ -1.731e-6■■■□□ 14.7
SRSF1Q07955 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.32□□□□□ -1.881e-6■■■□□ 14.7
SRSF1Q07955 SNX5-206ENST00000469704 696 ntTSL 325.05■■□□□ 1.67e-16■■■□□ 14.7
SRSF1Q07955 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC23.7■■□□□ 1.387e-16■■■□□ 14.7
SRSF1Q07955 SNX5-217ENST00000606557 1087 ntBASIC20.92■□□□□ 0.947e-16■■■□□ 14.7
SRSF1Q07955 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.55■□□□□ 0.567e-16■■■□□ 14.7
SRSF1Q07955 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.477e-16■■■□□ 14.7
SRSF1Q07955 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.42■□□□□ 0.387e-16■■■□□ 14.7
SRSF1Q07955 OVOL2-204ENST00000486776 550 ntTSL 312.97□□□□□ -0.337e-16■■■□□ 14.7
SRSF1Q07955 SNX5-214ENST00000490175 2025 ntTSL 1 (best)12.44□□□□□ -0.427e-16■■■□□ 14.7
SRSF1Q07955 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.487e-16■■■□□ 14.7
SRSF1Q07955 SNX5-207ENST00000474883 695 ntTSL 54.2□□□□□ -1.747e-16■■■□□ 14.7
SRSF1Q07955 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.11■□□□□ 0.173e-6■■■□□ 14.7
SRSF1Q07955 ANXA4-204ENST00000460439 543 ntTSL 412.72□□□□□ -0.373e-6■■■□□ 14.7
SRSF1Q07955 ANXA4-212ENST00000635311 1492 ntTSL 212.36□□□□□ -0.433e-6■■■□□ 14.7
SRSF1Q07955 ANXA4-205ENST00000460942 576 ntTSL 512.15□□□□□ -0.463e-6■■■□□ 14.7
SRSF1Q07955 ANXA4-211ENST00000487351 552 ntTSL 211.72□□□□□ -0.533e-6■■■□□ 14.7
SRSF1Q07955 ANXA4-201ENST00000394295 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.853e-6■■■□□ 14.7
SRSF1Q07955 ANXA4-203ENST00000418066 905 ntTSL 36.94□□□□□ -1.33e-6■■■□□ 14.7
SRSF1Q07955 ANXA4-209ENST00000477632 3949 ntTSL 1 (best)6.79□□□□□ -1.323e-6■■■□□ 14.7
SRSF1Q07955 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.492e-8■■■□□ 14.7
SRSF1Q07955 SRRT-216ENST00000618262 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.752e-8■■■□□ 14.7
SRSF1Q07955 SRRT-215ENST00000614484 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.82e-8■■■□□ 14.7
SRSF1Q07955 SRRT-213ENST00000611405 2905 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.962e-8■■■□□ 14.7
SRSF1Q07955 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.571e-7■■■□□ 14.7
SRSF1Q07955 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.531e-7■■■□□ 14.7
SRSF1Q07955 VEGFA-220ENST00000519767 970 ntTSL 1 (best)24.25■■□□□ 1.471e-7■■■□□ 14.7
SRSF1Q07955 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.471e-7■■■□□ 14.7
SRSF1Q07955 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC24.03■■□□□ 1.441e-7■■■□□ 14.7
SRSF1Q07955 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC23.86■■□□□ 1.411e-7■■■□□ 14.7
SRSF1Q07955 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC23.86■■□□□ 1.411e-7■■■□□ 14.7
SRSF1Q07955 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC23.86■■□□□ 1.411e-7■■■□□ 14.7
SRSF1Q07955 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC23.86■■□□□ 1.411e-7■■■□□ 14.7
SRSF1Q07955 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.411e-7■■■□□ 14.7
SRSF1Q07955 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.411e-7■■■□□ 14.7
SRSF1Q07955 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.411e-7■■■□□ 14.7
SRSF1Q07955 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC23.86■■□□□ 1.411e-7■■■□□ 14.7
SRSF1Q07955 CDK5RAP3-210ENST00000578733 578 ntTSL 210.27□□□□□ -0.771e-6■■■□□ 14.7
SRSF1Q07955 KRI1-205ENST00000536714 806 ntTSL 217.45■□□□□ 0.382e-6■■■□□ 14.7
SRSF1Q07955 KRI1-215ENST00000618579 516 ntTSL 316.87■□□□□ 0.292e-6■■■□□ 14.7
SRSF1Q07955 KRI1-214ENST00000612875 2608 ntTSL 216.2■□□□□ 0.182e-6■■■□□ 14.7
SRSF1Q07955 KRI1-203ENST00000478863 2545 ntTSL 214.8□□□□□ -0.042e-6■■■□□ 14.7
Retrieved 100 of 14,836 protein–RNA pairs in 102.4 ms