RNA–Protein interactions for RNA: ENST00000495878.5

ARAP1-211, Transcript of ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1, humanhuman

TSL 1 (best)

Gene ARAP1, Length 2,758 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARAP1-211ENST00000495878 NISCHQ9Y2I1 1504 aa27.17■■□□□ 1.94
ARAP1-211ENST00000495878 SHROOM4Q9ULL8 1493 aa23.3■■□□□ 1.32
ARAP1-211ENST00000495878 CCDC180Q9P1Z9 1646 aa23.05■■□□□ 1.28
ARAP1-211ENST00000495878 ZCCHC6Q5VYS8 1495 aaKnown RBP22.97■■□□□ 1.27
ARAP1-211ENST00000495878 SUPT5HO00267 1087 aaKnown RBP22.85■■□□□ 1.25
ARAP1-211ENST00000495878 DCAF8L2P0C7V8 631 aa22.67■■□□□ 1.22
ARAP1-211ENST00000495878 DCAF1Q9Y4B6 1507 aa22.22■■□□□ 1.15
ARAP1-211ENST00000495878 CHIC1Q5VXU3 224 aa22.17■■□□□ 1.14
ARAP1-211ENST00000495878 MYO15BQ96JP2 1530 aa22.11■■□□□ 1.13
ARAP1-211ENST00000495878 SCRIBQ14160 1630 aa21.71■■□□□ 1.07
ARAP1-211ENST00000495878 ABCC9O60706 1549 aa21.68■■□□□ 1.06
ARAP1-211ENST00000495878 LOC105371045A0A1W2PR82 267 aa21.58■■□□□ 1.05
ARAP1-211ENST00000495878 PCGF6Q9BYE7 350 aa21.54■■□□□ 1.04
ARAP1-211ENST00000495878 RSF1Q96T23 1441 aaPredicted RBP21.53■■□□□ 1.04
ARAP1-211ENST00000495878 HRCP23327 699 aa21.49■■□□□ 1.03
ARAP1-211ENST00000495878 RB1CC1Q8TDY2 1594 aa21.33■■□□□ 1.01
ARAP1-211ENST00000495878 NACADO15069 1562 aa21.32■■□□□ 1
ARAP1-211ENST00000495878 CECR2Q9BXF3 1484 aa21.25■□□□□ 0.99
ARAP1-211ENST00000495878 TRIM41Q8WV44 630 aa21.24■□□□□ 0.99
ARAP1-211ENST00000495878 MROH2BQ7Z745 1585 aa21.16■□□□□ 0.98
ARAP1-211ENST00000495878 PPARGC1BQ86YN6 1023 aaKnown RBP21.14■□□□□ 0.97
ARAP1-211ENST00000495878 FAM9AQ8IZU1 332 aaPredicted RBP21.14■□□□□ 0.97
ARAP1-211ENST00000495878 WIZO95785 1651 aa21.07■□□□□ 0.96
ARAP1-211ENST00000495878 TRIM26Q12899 539 aaPredicted RBP21.07■□□□□ 0.96
ARAP1-211ENST00000495878 EHMT2Q96KQ7 1210 aa21.02■□□□□ 0.95
ARAP1-211ENST00000495878 BAZ1AQ9NRL2 1556 aaPredicted RBP20.87■□□□□ 0.93
ARAP1-211ENST00000495878 UNC13AQ9UPW8 1703 aa20.74■□□□□ 0.91
ARAP1-211ENST00000495878 EIF4G1Q04637 1599 aaKnown RBP20.73■□□□□ 0.91
ARAP1-211ENST00000495878 SMARCA4P51532 1647 aa20.7■□□□□ 0.9
ARAP1-211ENST00000495878 TOP2AP11388 1531 aaKnown RBP20.67■□□□□ 0.9
ARAP1-211ENST00000495878 CCDC88BA6NC98 1476 aa20.63■□□□□ 0.89
ARAP1-211ENST00000495878 ABCC8Q09428 1581 aa20.62■□□□□ 0.89
ARAP1-211ENST00000495878 SMARCA2P51531 1590 aa20.59■□□□□ 0.89
ARAP1-211ENST00000495878 ZEB1P37275 1124 aaPredicted RBP20.56■□□□□ 0.88
ARAP1-211ENST00000495878 PABPN1Q86U42 306 aaKnown RBP eCLIP20.56■□□□□ 0.881e-6■■□□□ 12
ARAP1-211ENST00000495878 BICRAQ9NZM4 1560 aa20.45■□□□□ 0.86
ARAP1-211ENST00000495878 SOGA1O94964 1423 aa20.42■□□□□ 0.86
ARAP1-211ENST00000495878 RUSC2Q8N2Y8 1516 aa20.34■□□□□ 0.85
ARAP1-211ENST00000495878 TTBK1Q5TCY1 1321 aaPredicted RBP20.33■□□□□ 0.84
ARAP1-211ENST00000495878 CEP162Q5TB80 1403 aa20.3■□□□□ 0.84
ARAP1-211ENST00000495878 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.3■□□□□ 0.84
ARAP1-211ENST00000495878 CSRNP3Q8WYN3 585 aa20.29■□□□□ 0.84
ARAP1-211ENST00000495878 PEG3Q9GZU2 1588 aa20.25■□□□□ 0.83
ARAP1-211ENST00000495878 UBTFP17480 764 aaKnown RBP20.25■□□□□ 0.83
ARAP1-211ENST00000495878 TNIKQ9UKE5 1360 aa20.24■□□□□ 0.83
ARAP1-211ENST00000495878 WRNQ14191 1432 aaPredicted RBP eCLIP20.23■□□□□ 0.83
ARAP1-211ENST00000495878 EEA1Q15075 1411 aa20.22■□□□□ 0.83
ARAP1-211ENST00000495878 CCER1Q8TC90 406 aaPredicted RBP20.21■□□□□ 0.83
ARAP1-211ENST00000495878 ATAD2BQ9ULI0 1458 aa20.16■□□□□ 0.82
ARAP1-211ENST00000495878 SYNJ1O43426 1573 aa20.14■□□□□ 0.82
ARAP1-211ENST00000495878 GOLGA3Q08378 1498 aa20.13■□□□□ 0.81
ARAP1-211ENST00000495878 BAZ1BQ9UIG0 1483 aaKnown RBP20.12■□□□□ 0.81
ARAP1-211ENST00000495878 CEP164Q9UPV0 1460 aa20■□□□□ 0.79
ARAP1-211ENST00000495878 KIF21BO75037 1637 aa19.97■□□□□ 0.79
ARAP1-211ENST00000495878 CLIP1P30622 1438 aa19.93■□□□□ 0.78
ARAP1-211ENST00000495878 RANGAP1P46060 587 aaPredicted RBP19.92■□□□□ 0.78
ARAP1-211ENST00000495878 RAPGEF2Q9Y4G8 1499 aa19.91■□□□□ 0.78
ARAP1-211ENST00000495878 TOP2BQ02880 1626 aa19.86■□□□□ 0.77
ARAP1-211ENST00000495878 SCAF1Q9H7N4 1312 aaKnown RBP19.85■□□□□ 0.77
ARAP1-211ENST00000495878 HNRNPUL2Q1KMD3 747 aaKnown RBP19.83■□□□□ 0.77
ARAP1-211ENST00000495878 VPS8Q8N3P4 1428 aa19.82■□□□□ 0.76
ARAP1-211ENST00000495878 DIEXFQ68CQ4 756 aaKnown RBP19.81■□□□□ 0.76
ARAP1-211ENST00000495878 BIVM-ERCC5R4GMW8 1640 aa19.78■□□□□ 0.76
ARAP1-211ENST00000495878 APLP2Q06481 763 aa19.77■□□□□ 0.75
ARAP1-211ENST00000495878 NCAPD3P42695 1498 aa19.74■□□□□ 0.75
ARAP1-211ENST00000495878 HMGXB3Q12766 1538 aa19.72■□□□□ 0.75
ARAP1-211ENST00000495878 CUX1P39880 1505 aa19.69■□□□□ 0.74
ARAP1-211ENST00000495878 PRXQ9BXM0 1461 aa19.67■□□□□ 0.74
ARAP1-211ENST00000495878 ZNF316A6NFI3 1004 aaPredicted RBP19.64■□□□□ 0.73
ARAP1-211ENST00000495878 NEUROD1Q13562 356 aa19.64■□□□□ 0.73
ARAP1-211ENST00000495878 ERICH3Q5RHP9 1530 aa19.64■□□□□ 0.73
ARAP1-211ENST00000495878 ACIN1Q9UKV3 1341 aaKnown RBP19.63■□□□□ 0.73
ARAP1-211ENST00000495878 CFTRP13569 1480 aa19.6■□□□□ 0.73
ARAP1-211ENST00000495878 ARAP1Q96P48 1450 aa19.6■□□□□ 0.73
ARAP1-211ENST00000495878 KIF27Q86VH2 1401 aa19.58■□□□□ 0.73
ARAP1-211ENST00000495878 KANK4Q5T7N3 995 aaPredicted RBP19.55■□□□□ 0.72
ARAP1-211ENST00000495878 CENPBP07199 599 aaPredicted RBP19.49■□□□□ 0.71
ARAP1-211ENST00000495878 PRDM2Q13029 1718 aa19.44■□□□□ 0.7
ARAP1-211ENST00000495878 GTF3C3Q9Y5Q9 886 aa19.44■□□□□ 0.7
ARAP1-211ENST00000495878 ARHGAP35Q9NRY4 1499 aa19.43■□□□□ 0.7
ARAP1-211ENST00000495878 CUX2O14529 1486 aa19.43■□□□□ 0.7
ARAP1-211ENST00000495878 MIER1Q8N108 512 aa19.4■□□□□ 0.7
ARAP1-211ENST00000495878 YTHDC1Q96MU7 727 aaKnown RBP19.4■□□□□ 0.7
ARAP1-211ENST00000495878 IGF1RP08069 1367 aa19.39■□□□□ 0.69
ARAP1-211ENST00000495878 CADPSQ9ULU8 1353 aa19.39■□□□□ 0.69
ARAP1-211ENST00000495878 DHX57Q6P158 1386 aaKnown RBP19.38■□□□□ 0.69
ARAP1-211ENST00000495878 RRBP1Q9P2E9 1410 aaKnown RBP19.35■□□□□ 0.69
ARAP1-211ENST00000495878 FGD5Q6ZNL6 1462 aa19.34■□□□□ 0.69
ARAP1-211ENST00000495878 ITGAEP38570 1179 aa19.32■□□□□ 0.68
ARAP1-211ENST00000495878 CARMIL1Q5VZK9 1371 aa19.31■□□□□ 0.68
ARAP1-211ENST00000495878 CCNB3Q8WWL7 1395 aa19.3■□□□□ 0.68
ARAP1-211ENST00000495878 PELP1Q8IZL8 1130 aaKnown RBP19.29■□□□□ 0.68
ARAP1-211ENST00000495878 CLSPNQ9HAW4 1339 aa19.29■□□□□ 0.68
ARAP1-211ENST00000495878 CC2D2AQ9P2K1 1620 aa19.28■□□□□ 0.68
ARAP1-211ENST00000495878 P3H3Q8IVL6 736 aa19.22■□□□□ 0.67
ARAP1-211ENST00000495878 FANCD2Q9BXW9 1451 aa19.22■□□□□ 0.67
ARAP1-211ENST00000495878 TIAM1Q13009 1591 aa19.21■□□□□ 0.67
ARAP1-211ENST00000495878 RAD54L2Q9Y4B4 1467 aa19.18■□□□□ 0.66
ARAP1-211ENST00000495878 ATP1B4Q9UN42 357 aaPredicted RBP19.16■□□□□ 0.66
ARAP1-211ENST00000495878 LRRC9Q6ZRR7 1453 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms