RNA–Protein interactions for RNA: ENST00000606602.1

SNX5-219, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-219ENST00000606602 NISCHQ9Y2I1 1504 aa60.72■■■■■ 7.31
SNX5-219ENST00000606602 ABCC9O60706 1549 aa54.4■■■■■ 6.3
SNX5-219ENST00000606602 CCDC180Q9P1Z9 1646 aa54.36■■■■■ 6.29
SNX5-219ENST00000606602 RB1CC1Q8TDY2 1594 aa51.76■■■■■ 5.88
SNX5-219ENST00000606602 NACADO15069 1562 aa51.43■■■■■ 5.82
SNX5-219ENST00000606602 DCAF8L2P0C7V8 631 aa51.36■■■■■ 5.81
SNX5-219ENST00000606602 DNAJC5BQ9UF47 199 aa50.97■■■■■ 5.75
SNX5-219ENST00000606602 MYO15BQ96JP2 1530 aa50.74■■■■■ 5.71
SNX5-219ENST00000606602 PABPN1Q86U42 306 aaKnown RBP eCLIP50.72■■■■■ 5.71
SNX5-219ENST00000606602 UNC13AQ9UPW8 1703 aa50.47■■■■■ 5.67
SNX5-219ENST00000606602 ZCCHC6Q5VYS8 1495 aaKnown RBP50.33■■■■■ 5.65
SNX5-219ENST00000606602 BICRAQ9NZM4 1560 aa50.23■■■■■ 5.63
SNX5-219ENST00000606602 DCAF1Q9Y4B6 1507 aa50.12■■■■■ 5.61
SNX5-219ENST00000606602 SCRIBQ14160 1630 aa49.62■■■■■ 5.53
SNX5-219ENST00000606602 SHROOM4Q9ULL8 1493 aa49.57■■■■■ 5.53
SNX5-219ENST00000606602 CC2D2AQ9P2K1 1620 aa49.09■■■■■ 5.45
SNX5-219ENST00000606602 EIF4G1Q04637 1599 aaKnown RBP49.02■■■■■ 5.44
SNX5-219ENST00000606602 CECR2Q9BXF3 1484 aa48.99■■■■■ 5.43
SNX5-219ENST00000606602 NCAPD3P42695 1498 aa47.51■■■■■ 5.2
SNX5-219ENST00000606602 ATAD2BQ9ULI0 1458 aa47.38■■■■■ 5.17
SNX5-219ENST00000606602 SMARCA4P51532 1647 aa47.31■■■■■ 5.16
SNX5-219ENST00000606602 SMARCA2P51531 1590 aa47.24■■■■■ 5.15
SNX5-219ENST00000606602 BAZ1AQ9NRL2 1556 aaPredicted RBP47.12■■■■■ 5.13
SNX5-219ENST00000606602 HMGXB3Q12766 1538 aa47.12■■■■■ 5.13
SNX5-219ENST00000606602 ERCC6Q03468 1493 aa46.98■■■■■ 5.11
SNX5-219ENST00000606602 BAZ1BQ9UIG0 1483 aaKnown RBP46.94■■■■■ 5.1
SNX5-219ENST00000606602 PEG3Q9GZU2 1588 aa46.83■■■■■ 5.09
SNX5-219ENST00000606602 CUX2O14529 1486 aa46.81■■■■■ 5.08
SNX5-219ENST00000606602 MROH2BQ7Z745 1585 aa46.79■■■■■ 5.08
SNX5-219ENST00000606602 DNAJC5Q9H3Z4 198 aa46.74■■■■■ 5.07
SNX5-219ENST00000606602 NESP48681 1621 aa46.74■■■■■ 5.07
SNX5-219ENST00000606602 LAMC3Q9Y6N6 1575 aa46.39■■■■■ 5.02
SNX5-219ENST00000606602 WIZO95785 1651 aa46.2■■■■■ 4.99
SNX5-219ENST00000606602 PDS5BQ9NTI5 1447 aa46.19■■■■■ 4.98
SNX5-219ENST00000606602 THOC2Q8NI27 1593 aaKnown RBP46.18■■■■■ 4.98
SNX5-219ENST00000606602 CADPSQ9ULU8 1353 aa46.1■■■■■ 4.97
SNX5-219ENST00000606602 KIF21AQ7Z4S6 1674 aa46.05■■■■■ 4.96
SNX5-219ENST00000606602 RSF1Q96T23 1441 aaPredicted RBP45.89■■■■■ 4.94
SNX5-219ENST00000606602 MRC2Q9UBG0 1479 aa45.75■■■■■ 4.91
SNX5-219ENST00000606602 TOP2AP11388 1531 aaKnown RBP45.64■■■■■ 4.9
SNX5-219ENST00000606602 WDR62O43379 1518 aa45.6■■■■■ 4.89
SNX5-219ENST00000606602 CEP164Q9UPV0 1460 aa45.6■■■■■ 4.89
SNX5-219ENST00000606602 CFTRP13569 1480 aa45.56■■■■■ 4.88
SNX5-219ENST00000606602 FANCD2Q9BXW9 1451 aa45.56■■■■■ 4.88
SNX5-219ENST00000606602 URB2Q14146 1524 aaKnown RBP45.17■■■■■ 4.82
SNX5-219ENST00000606602 CCDC88BA6NC98 1476 aa45.17■■■■■ 4.82
SNX5-219ENST00000606602 PRDM2Q13029 1718 aa44.96■■■■■ 4.79
SNX5-219ENST00000606602 TRIM41Q8WV44 630 aa44.78■■■■■ 4.76
SNX5-219ENST00000606602 OSCARQ8IYS5 282 aa44.77■■■■■ 4.76
SNX5-219ENST00000606602 TOPBP1Q92547 1522 aa44.7■■■■■ 4.75
SNX5-219ENST00000606602 IFT140Q96RY7 1462 aa44.69■■■■■ 4.74
SNX5-219ENST00000606602 ABCC8Q09428 1581 aa44.61■■■■■ 4.73
SNX5-219ENST00000606602 ZNF608Q9ULD9 1512 aaPredicted RBP44.6■■■■■ 4.73
SNX5-219ENST00000606602 DNMBPQ6XZF7 1577 aa44.52■■■■■ 4.72
SNX5-219ENST00000606602 EIF4G3O43432 1585 aaKnown RBP44.31■■■■■ 4.68
SNX5-219ENST00000606602 POLA1P09884 1462 aaPredicted RBP44.25■■■■■ 4.67
SNX5-219ENST00000606602 TARBP1Q13395 1621 aaKnown RBP44.24■■■■■ 4.67
SNX5-219ENST00000606602 AQRO60306 1485 aaKnown RBP eCLIP44.24■■■■■ 4.672e-8■■■■□ 21.6
SNX5-219ENST00000606602 RAD54L2Q9Y4B4 1467 aa44.11■■■■■ 4.65
SNX5-219ENST00000606602 SOGA1O94964 1423 aa44.09■■■■■ 4.65
SNX5-219ENST00000606602 RIMBP3CA6NJZ7 1639 aa44.07■■■■■ 4.65
SNX5-219ENST00000606602 RIMBP3BA6NNM3 1639 aa44.07■■■■■ 4.65
SNX5-219ENST00000606602 RIMBP3Q9UFD9 1639 aa44.07■■■■■ 4.65
SNX5-219ENST00000606602 SUPT5HO00267 1087 aaKnown RBP44.02■■■■■ 4.64
SNX5-219ENST00000606602 TDRD9Q8NDG6 1382 aaKnown RBP44.02■■■■■ 4.64
SNX5-219ENST00000606602 FBLN2P98095 1184 aa44.01■■■■■ 4.64
SNX5-219ENST00000606602 FGD5Q6ZNL6 1462 aa43.99■■■■■ 4.63
SNX5-219ENST00000606602 ARHGEF11O15085 1522 aa43.98■■■■■ 4.63
SNX5-219ENST00000606602 CUX1P39880 1505 aa43.95■■■■■ 4.63
SNX5-219ENST00000606602 CHD1O14646 1710 aa43.93■■■■■ 4.62
SNX5-219ENST00000606602 WDR97A6NE52 1622 aa43.79■■■■■ 4.6
SNX5-219ENST00000606602 SNAPC4Q5SXM2 1469 aa43.77■■■■■ 4.6
SNX5-219ENST00000606602 CYB5RLQ6IPT4 315 aa43.74■■■■■ 4.59
SNX5-219ENST00000606602 CHMP7Q8WUX9 453 aaPredicted RBP43.68■■■■■ 4.58
SNX5-219ENST00000606602 GRIN2BQ13224 1484 aa43.68■■■■■ 4.58
SNX5-219ENST00000606602 MAGI1Q96QZ7 1491 aaPredicted RBP43.64■■■■■ 4.58
SNX5-219ENST00000606602 ARAP1Q96P48 1450 aa43.56■■■■■ 4.56
SNX5-219ENST00000606602 GAPVD1Q14C86 1478 aa43.53■■■■■ 4.56
SNX5-219ENST00000606602 SYNJ2O15056 1496 aa43.51■■■■■ 4.56
SNX5-219ENST00000606602 ABCA10Q8WWZ4 1543 aa43.48■■■■■ 4.55
SNX5-219ENST00000606602 SYNJ1O43426 1573 aa43.48■■■■■ 4.55
SNX5-219ENST00000606602 CLASP1Q7Z460 1538 aa43.48■■■■■ 4.55
SNX5-219ENST00000606602 PBRM1Q86U86 1689 aa43.4■■■■■ 4.54
SNX5-219ENST00000606602 WRNQ14191 1432 aaPredicted RBP eCLIP43.38■■■■■ 4.536e-6■■■□□ 16.7
SNX5-219ENST00000606602 ABCA5Q8WWZ7 1642 aa43.37■■■■■ 4.53
SNX5-219ENST00000606602 TRHP20396 242 aaPredicted RBP43.25■■■■■ 4.51
SNX5-219ENST00000606602 TOP2BQ02880 1626 aa43.25■■■■■ 4.51
SNX5-219ENST00000606602 BIVM-ERCC5R4GMW8 1640 aa43.22■■■■■ 4.51
SNX5-219ENST00000606602 GRIN2AQ12879 1464 aa43.1■■■■■ 4.49
SNX5-219ENST00000606602 ADAMTS12P58397 1594 aa43.05■■■■■ 4.48
SNX5-219ENST00000606602 FHAD1B1AJZ9 1412 aa43■■■■■ 4.47
SNX5-219ENST00000606602 NUP160Q12769 1436 aa42.94■■■■■ 4.46
SNX5-219ENST00000606602 ERICH3Q5RHP9 1530 aa42.93■■■■■ 4.46
SNX5-219ENST00000606602 CEP170Q5SW79 1584 aa42.91■■■■■ 4.46
SNX5-219ENST00000606602 ERCC6L2Q5T890 1561 aa42.82■■■■■ 4.45
SNX5-219ENST00000606602 SHROOM2Q13796 1616 aa42.68■■■■■ 4.42
SNX5-219ENST00000606602 JPH4Q96JJ6 628 aa42.58■■■■■ 4.41
SNX5-219ENST00000606602 PRG4Q92954 1404 aaPredicted RBP42.57■■■■■ 4.41
SNX5-219ENST00000606602 KIF27Q86VH2 1401 aa42.48■■■■■ 4.39
SNX5-219ENST00000606602 IGF1RP08069 1367 aa42.47■■■■■ 4.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms