RNA–Protein interactions for RNA: ENST00000500777.6

SEC31A-209, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC31A, Length 3,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-209ENST00000500777 NISCHQ9Y2I1 1504 aa11.36□□□□□ -0.59
SEC31A-209ENST00000500777 DCAF8L2P0C7V8 631 aa9.92□□□□□ -0.82
SEC31A-209ENST00000500777 CCDC180Q9P1Z9 1646 aa9.78□□□□□ -0.84
SEC31A-209ENST00000500777 SHROOM4Q9ULL8 1493 aa9.61□□□□□ -0.87
SEC31A-209ENST00000500777 ABCC9O60706 1549 aa9.55□□□□□ -0.88
SEC31A-209ENST00000500777 ZCCHC6Q5VYS8 1495 aaKnown RBP9.49□□□□□ -0.89
SEC31A-209ENST00000500777 SUPT5HO00267 1087 aaKnown RBP9.34□□□□□ -0.91
SEC31A-209ENST00000500777 DCAF1Q9Y4B6 1507 aa9.27□□□□□ -0.93
SEC31A-209ENST00000500777 NACADO15069 1562 aa9.21□□□□□ -0.93
SEC31A-209ENST00000500777 SCRIBQ14160 1630 aa9.19□□□□□ -0.94
SEC31A-209ENST00000500777 RB1CC1Q8TDY2 1594 aa9.18□□□□□ -0.94
SEC31A-209ENST00000500777 MYO15BQ96JP2 1530 aa9.14□□□□□ -0.95
SEC31A-209ENST00000500777 PABPN1Q86U42 306 aaKnown RBP eCLIP9.11□□□□□ -0.952e-7■■■■□ 22
SEC31A-209ENST00000500777 CECR2Q9BXF3 1484 aa8.88□□□□□ -0.99
SEC31A-209ENST00000500777 RSF1Q96T23 1441 aaPredicted RBP8.86□□□□□ -0.99
SEC31A-209ENST00000500777 UNC13AQ9UPW8 1703 aa8.82□□□□□ -1
SEC31A-209ENST00000500777 BAZ1AQ9NRL2 1556 aaPredicted RBP8.8□□□□□ -1
SEC31A-209ENST00000500777 MROH2BQ7Z745 1585 aa8.8□□□□□ -1
SEC31A-209ENST00000500777 BICRAQ9NZM4 1560 aa8.76□□□□□ -1.01
SEC31A-209ENST00000500777 CHIC1Q5VXU3 224 aa8.75□□□□□ -1.01
SEC31A-209ENST00000500777 TRIM41Q8WV44 630 aa8.74□□□□□ -1.01
SEC31A-209ENST00000500777 WIZO95785 1651 aa8.71□□□□□ -1.01
SEC31A-209ENST00000500777 SMARCA4P51532 1647 aa8.71□□□□□ -1.02
SEC31A-209ENST00000500777 FAM9AQ8IZU1 332 aaPredicted RBP8.68□□□□□ -1.02
SEC31A-209ENST00000500777 BAZ1BQ9UIG0 1483 aaKnown RBP8.66□□□□□ -1.02
SEC31A-209ENST00000500777 EHMT2Q96KQ7 1210 aa8.65□□□□□ -1.03
SEC31A-209ENST00000500777 SMARCA2P51531 1590 aa8.62□□□□□ -1.03
SEC31A-209ENST00000500777 ATAD2BQ9ULI0 1458 aa8.62□□□□□ -1.03
SEC31A-209ENST00000500777 TOP2AP11388 1531 aaKnown RBP8.6□□□□□ -1.03
SEC31A-209ENST00000500777 EIF4G1Q04637 1599 aaKnown RBP8.6□□□□□ -1.03
SEC31A-209ENST00000500777 CCDC88BA6NC98 1476 aa8.58□□□□□ -1.04
SEC31A-209ENST00000500777 NCAPD3P42695 1498 aa8.52□□□□□ -1.05
SEC31A-209ENST00000500777 LOC105371045A0A1W2PR82 267 aa8.52□□□□□ -1.05
SEC31A-209ENST00000500777 CC2D2AQ9P2K1 1620 aa8.49□□□□□ -1.05
SEC31A-209ENST00000500777 PEG3Q9GZU2 1588 aa8.48□□□□□ -1.05
SEC31A-209ENST00000500777 HMGXB3Q12766 1538 aa8.45□□□□□ -1.06
SEC31A-209ENST00000500777 UBTFP17480 764 aaKnown RBP8.44□□□□□ -1.06
SEC31A-209ENST00000500777 WRNQ14191 1432 aaPredicted RBP eCLIP8.43□□□□□ -1.06
SEC31A-209ENST00000500777 ABCC8Q09428 1581 aa8.43□□□□□ -1.06
SEC31A-209ENST00000500777 CADPSQ9ULU8 1353 aa8.4□□□□□ -1.07
SEC31A-209ENST00000500777 RANGAP1P46060 587 aaPredicted RBP8.39□□□□□ -1.07
SEC31A-209ENST00000500777 CSRNP3Q8WYN3 585 aa8.38□□□□□ -1.07
SEC31A-209ENST00000500777 DNAJC5BQ9UF47 199 aa8.37□□□□□ -1.07
SEC31A-209ENST00000500777 CFTRP13569 1480 aa8.33□□□□□ -1.08
SEC31A-209ENST00000500777 SOGA1O94964 1423 aa8.31□□□□□ -1.08
SEC31A-209ENST00000500777 PDS5BQ9NTI5 1447 aa8.3□□□□□ -1.08
SEC31A-209ENST00000500777 NESP48681 1621 aa8.3□□□□□ -1.08
SEC31A-209ENST00000500777 FANCD2Q9BXW9 1451 aa8.3□□□□□ -1.08
SEC31A-209ENST00000500777 EEA1Q15075 1411 aa8.29□□□□□ -1.08
SEC31A-209ENST00000500777 APLP2Q06481 763 aa8.28□□□□□ -1.08
SEC31A-209ENST00000500777 TTBK1Q5TCY1 1321 aaPredicted RBP8.26□□□□□ -1.09
SEC31A-209ENST00000500777 CEP164Q9UPV0 1460 aa8.26□□□□□ -1.09
SEC31A-209ENST00000500777 ERCC6Q03468 1493 aa8.26□□□□□ -1.09
SEC31A-209ENST00000500777 SYNJ1O43426 1573 aa8.25□□□□□ -1.09
SEC31A-209ENST00000500777 KIF27Q86VH2 1401 aa8.25□□□□□ -1.09
SEC31A-209ENST00000500777 PPARGC1BQ86YN6 1023 aaKnown RBP8.24□□□□□ -1.09
SEC31A-209ENST00000500777 RUSC2Q8N2Y8 1516 aa8.24□□□□□ -1.09
SEC31A-209ENST00000500777 PCGF6Q9BYE7 350 aa8.23□□□□□ -1.09
SEC31A-209ENST00000500777 CUX2O14529 1486 aa8.23□□□□□ -1.09
SEC31A-209ENST00000500777 LAMC3Q9Y6N6 1575 aa8.22□□□□□ -1.09
SEC31A-209ENST00000500777 CUX1P39880 1505 aa8.21□□□□□ -1.1
SEC31A-209ENST00000500777 ATP1B4Q9UN42 357 aaPredicted RBP8.21□□□□□ -1.1
SEC31A-209ENST00000500777 TOP2BQ02880 1626 aa8.2□□□□□ -1.1
SEC31A-209ENST00000500777 GOLGA3Q08378 1498 aa8.2□□□□□ -1.1
SEC31A-209ENST00000500777 FGD5Q6ZNL6 1462 aa8.2□□□□□ -1.1
SEC31A-209ENST00000500777 FBLN2P98095 1184 aa8.18□□□□□ -1.1
SEC31A-209ENST00000500777 TDRD9Q8NDG6 1382 aaKnown RBP8.17□□□□□ -1.1
SEC31A-209ENST00000500777 TNIKQ9UKE5 1360 aa8.16□□□□□ -1.1
SEC31A-209ENST00000500777 TOPBP1Q92547 1522 aa8.16□□□□□ -1.1
SEC31A-209ENST00000500777 RAD54L2Q9Y4B4 1467 aa8.16□□□□□ -1.1
SEC31A-209ENST00000500777 CARMIL1Q5VZK9 1371 aa8.15□□□□□ -1.1
SEC31A-209ENST00000500777 PRDM2Q13029 1718 aa8.14□□□□□ -1.11
SEC31A-209ENST00000500777 CEP162Q5TB80 1403 aa8.14□□□□□ -1.11
SEC31A-209ENST00000500777 P3H3Q8IVL6 736 aa8.14□□□□□ -1.11
SEC31A-209ENST00000500777 BIVM-ERCC5R4GMW8 1640 aa8.14□□□□□ -1.11
SEC31A-209ENST00000500777 DNMBPQ6XZF7 1577 aa8.14□□□□□ -1.11
SEC31A-209ENST00000500777 TRIM26Q12899 539 aaPredicted RBP8.14□□□□□ -1.11
SEC31A-209ENST00000500777 POLA1P09884 1462 aaPredicted RBP8.13□□□□□ -1.11
SEC31A-209ENST00000500777 CLIP1P30622 1438 aa8.13□□□□□ -1.11
SEC31A-209ENST00000500777 RAPGEF2Q9Y4G8 1499 aa8.12□□□□□ -1.11
SEC31A-209ENST00000500777 MRC2Q9UBG0 1479 aa8.11□□□□□ -1.11
SEC31A-209ENST00000500777 URB2Q14146 1524 aaKnown RBP8.11□□□□□ -1.11
SEC31A-209ENST00000500777 IGF1RP08069 1367 aa8.11□□□□□ -1.11
SEC31A-209ENST00000500777 CHMP7Q8WUX9 453 aaPredicted RBP8.1□□□□□ -1.11
SEC31A-209ENST00000500777 KIF21AQ7Z4S6 1674 aa8.09□□□□□ -1.11
SEC31A-209ENST00000500777 GAPVD1Q14C86 1478 aa8.08□□□□□ -1.12
SEC31A-209ENST00000500777 KIF21BO75037 1637 aa8.06□□□□□ -1.12
SEC31A-209ENST00000500777 AQRO60306 1485 aaKnown RBP eCLIP8.06□□□□□ -1.128e-7■■■■□ 21.5
SEC31A-209ENST00000500777 ABCA10Q8WWZ4 1543 aa8.05□□□□□ -1.12
SEC31A-209ENST00000500777 PRXQ9BXM0 1461 aa8.04□□□□□ -1.12
SEC31A-209ENST00000500777 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.04□□□□□ -1.12
SEC31A-209ENST00000500777 HNRNPUL2Q1KMD3 747 aaKnown RBP8.04□□□□□ -1.12
SEC31A-209ENST00000500777 IFT140Q96RY7 1462 aa8.02□□□□□ -1.13
SEC31A-209ENST00000500777 ERICH3Q5RHP9 1530 aa8.02□□□□□ -1.13
SEC31A-209ENST00000500777 ARID3CA6NKF2 412 aa8□□□□□ -1.13
SEC31A-209ENST00000500777 GRIN2BQ13224 1484 aa8□□□□□ -1.13
SEC31A-209ENST00000500777 VPS8Q8N3P4 1428 aa7.99□□□□□ -1.13
SEC31A-209ENST00000500777 ZNF608Q9ULD9 1512 aaPredicted RBP7.98□□□□□ -1.13
SEC31A-209ENST00000500777 ITGAEP38570 1179 aa7.98□□□□□ -1.13
SEC31A-209ENST00000500777 FHAD1B1AJZ9 1412 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms