RNA–Protein interactions for RNA: ENST00000481323.1

SNX5-210, Transcript of sorting nexin 5, humanhuman

TSL 3 BASIC

Gene SNX5, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-210ENST00000481323 NISCHQ9Y2I1 1504 aa45.47■■■■■ 4.87
SNX5-210ENST00000481323 CCDC180Q9P1Z9 1646 aa40.45■■■■■ 4.07
SNX5-210ENST00000481323 ABCC9O60706 1549 aa39.98■■■■□ 3.99
SNX5-210ENST00000481323 RB1CC1Q8TDY2 1594 aa38.25■■■■□ 3.71
SNX5-210ENST00000481323 DCAF8L2P0C7V8 631 aa38.22■■■■□ 3.71
SNX5-210ENST00000481323 NACADO15069 1562 aa38.14■■■■□ 3.7
SNX5-210ENST00000481323 MYO15BQ96JP2 1530 aa37.81■■■■□ 3.64
SNX5-210ENST00000481323 ZCCHC6Q5VYS8 1495 aaKnown RBP37.79■■■■□ 3.64
SNX5-210ENST00000481323 DCAF1Q9Y4B6 1507 aa37.56■■■■□ 3.6
SNX5-210ENST00000481323 PABPN1Q86U42 306 aaKnown RBP eCLIP37.39■■■■□ 3.58
SNX5-210ENST00000481323 UNC13AQ9UPW8 1703 aa37.38■■■■□ 3.57
SNX5-210ENST00000481323 BICRAQ9NZM4 1560 aa37.15■■■■□ 3.54
SNX5-210ENST00000481323 DNAJC5BQ9UF47 199 aa37.05■■■■□ 3.52
SNX5-210ENST00000481323 SCRIBQ14160 1630 aa36.96■■■■□ 3.51
SNX5-210ENST00000481323 SHROOM4Q9ULL8 1493 aa36.63■■■■□ 3.45
SNX5-210ENST00000481323 EIF4G1Q04637 1599 aaKnown RBP36.18■■■■□ 3.38
SNX5-210ENST00000481323 CC2D2AQ9P2K1 1620 aa36.11■■■■□ 3.37
SNX5-210ENST00000481323 CECR2Q9BXF3 1484 aa35.93■■■■□ 3.34
SNX5-210ENST00000481323 SMARCA4P51532 1647 aa35.31■■■■□ 3.24
SNX5-210ENST00000481323 NCAPD3P42695 1498 aa35.25■■■■□ 3.23
SNX5-210ENST00000481323 ATAD2BQ9ULI0 1458 aa35.23■■■■□ 3.23
SNX5-210ENST00000481323 BAZ1AQ9NRL2 1556 aaPredicted RBP35.22■■■■□ 3.23
SNX5-210ENST00000481323 SMARCA2P51531 1590 aa35.12■■■■□ 3.21
SNX5-210ENST00000481323 MROH2BQ7Z745 1585 aa35.06■■■■□ 3.2
SNX5-210ENST00000481323 HMGXB3Q12766 1538 aa34.99■■■■□ 3.19
SNX5-210ENST00000481323 PEG3Q9GZU2 1588 aa34.95■■■■□ 3.18
SNX5-210ENST00000481323 BAZ1BQ9UIG0 1483 aaKnown RBP34.9■■■■□ 3.18
SNX5-210ENST00000481323 WIZO95785 1651 aa34.65■■■■□ 3.14
SNX5-210ENST00000481323 RSF1Q96T23 1441 aaPredicted RBP34.57■■■■□ 3.13
SNX5-210ENST00000481323 NESP48681 1621 aa34.52■■■■□ 3.12
SNX5-210ENST00000481323 ERCC6Q03468 1493 aa34.45■■■■□ 3.1
SNX5-210ENST00000481323 LAMC3Q9Y6N6 1575 aa34.31■■■■□ 3.08
SNX5-210ENST00000481323 TOP2AP11388 1531 aaKnown RBP34.23■■■■□ 3.07
SNX5-210ENST00000481323 CADPSQ9ULU8 1353 aa34.23■■■■□ 3.07
SNX5-210ENST00000481323 CUX2O14529 1486 aa34.14■■■■□ 3.06
SNX5-210ENST00000481323 PDS5BQ9NTI5 1447 aa34.13■■■■□ 3.05
SNX5-210ENST00000481323 KIF21AQ7Z4S6 1674 aa34.03■■■■□ 3.04
SNX5-210ENST00000481323 THOC2Q8NI27 1593 aaKnown RBP33.98■■■■□ 3.03
SNX5-210ENST00000481323 CFTRP13569 1480 aa33.94■■■■□ 3.02
SNX5-210ENST00000481323 CCDC88BA6NC98 1476 aa33.89■■■■□ 3.02
SNX5-210ENST00000481323 FANCD2Q9BXW9 1451 aa33.82■■■■□ 3
SNX5-210ENST00000481323 MRC2Q9UBG0 1479 aa33.79■■■■□ 3
SNX5-210ENST00000481323 CEP164Q9UPV0 1460 aa33.77■■■■□ 3
SNX5-210ENST00000481323 WDR62O43379 1518 aa33.67■■■□□ 2.98
SNX5-210ENST00000481323 SUPT5HO00267 1087 aaKnown RBP33.56■■■□□ 2.96
SNX5-210ENST00000481323 PRDM2Q13029 1718 aa33.55■■■□□ 2.96
SNX5-210ENST00000481323 DNAJC5Q9H3Z4 198 aa33.53■■■□□ 2.96
SNX5-210ENST00000481323 URB2Q14146 1524 aaKnown RBP33.51■■■□□ 2.95
SNX5-210ENST00000481323 TOPBP1Q92547 1522 aa33.24■■■□□ 2.91
SNX5-210ENST00000481323 ABCC8Q09428 1581 aa33.18■■■□□ 2.9
SNX5-210ENST00000481323 DNMBPQ6XZF7 1577 aa33.14■■■□□ 2.9
SNX5-210ENST00000481323 IFT140Q96RY7 1462 aa33.08■■■□□ 2.89
SNX5-210ENST00000481323 ZNF608Q9ULD9 1512 aaPredicted RBP33.01■■■□□ 2.87
SNX5-210ENST00000481323 POLA1P09884 1462 aaPredicted RBP32.94■■■□□ 2.86
SNX5-210ENST00000481323 CUX1P39880 1505 aa32.9■■■□□ 2.86
SNX5-210ENST00000481323 TARBP1Q13395 1621 aaKnown RBP32.88■■■□□ 2.85
SNX5-210ENST00000481323 RAD54L2Q9Y4B4 1467 aa32.85■■■□□ 2.85
SNX5-210ENST00000481323 SOGA1O94964 1423 aa32.83■■■□□ 2.85
SNX5-210ENST00000481323 FGD5Q6ZNL6 1462 aa32.82■■■□□ 2.84
SNX5-210ENST00000481323 AQRO60306 1485 aaKnown RBP eCLIP32.8■■■□□ 2.842e-8■■■■□ 21.6
SNX5-210ENST00000481323 EIF4G3O43432 1585 aaKnown RBP32.79■■■□□ 2.84
SNX5-210ENST00000481323 OSCARQ8IYS5 282 aa32.77■■■□□ 2.84
SNX5-210ENST00000481323 TDRD9Q8NDG6 1382 aaKnown RBP32.71■■■□□ 2.83
SNX5-210ENST00000481323 WRNQ14191 1432 aaPredicted RBP eCLIP32.58■■■□□ 2.816e-6■■■□□ 16.7
SNX5-210ENST00000481323 WDR97A6NE52 1622 aa32.52■■■□□ 2.8
SNX5-210ENST00000481323 SYNJ1O43426 1573 aa32.51■■■□□ 2.79
SNX5-210ENST00000481323 TOP2BQ02880 1626 aa32.5■■■□□ 2.79
SNX5-210ENST00000481323 FBLN2P98095 1184 aa32.49■■■□□ 2.79
SNX5-210ENST00000481323 BIVM-ERCC5R4GMW8 1640 aa32.48■■■□□ 2.79
SNX5-210ENST00000481323 ABCA10Q8WWZ4 1543 aa32.47■■■□□ 2.79
SNX5-210ENST00000481323 GRIN2BQ13224 1484 aa32.44■■■□□ 2.78
SNX5-210ENST00000481323 SNAPC4Q5SXM2 1469 aa32.44■■■□□ 2.78
SNX5-210ENST00000481323 CHD1O14646 1710 aa32.43■■■□□ 2.78
SNX5-210ENST00000481323 GAPVD1Q14C86 1478 aa32.42■■■□□ 2.78
SNX5-210ENST00000481323 MAGI1Q96QZ7 1491 aaPredicted RBP32.36■■■□□ 2.77
SNX5-210ENST00000481323 ABCA5Q8WWZ7 1642 aa32.34■■■□□ 2.77
SNX5-210ENST00000481323 CHMP7Q8WUX9 453 aaPredicted RBP32.33■■■□□ 2.77
SNX5-210ENST00000481323 TRIM41Q8WV44 630 aa32.33■■■□□ 2.77
SNX5-210ENST00000481323 PBRM1Q86U86 1689 aa32.31■■■□□ 2.76
SNX5-210ENST00000481323 SYNJ2O15056 1496 aa32.26■■■□□ 2.75
SNX5-210ENST00000481323 RIMBP3CA6NJZ7 1639 aa32.21■■■□□ 2.75
SNX5-210ENST00000481323 RIMBP3BA6NNM3 1639 aa32.21■■■□□ 2.75
SNX5-210ENST00000481323 RIMBP3Q9UFD9 1639 aa32.21■■■□□ 2.75
SNX5-210ENST00000481323 ARHGEF11O15085 1522 aa32.19■■■□□ 2.74
SNX5-210ENST00000481323 CLASP1Q7Z460 1538 aa32.09■■■□□ 2.73
SNX5-210ENST00000481323 ERICH3Q5RHP9 1530 aa32.06■■■□□ 2.72
SNX5-210ENST00000481323 ADAMTS12P58397 1594 aa32.06■■■□□ 2.72
SNX5-210ENST00000481323 FHAD1B1AJZ9 1412 aa32.03■■■□□ 2.72
SNX5-210ENST00000481323 GRIN2AQ12879 1464 aa32.03■■■□□ 2.72
SNX5-210ENST00000481323 CYB5RLQ6IPT4 315 aa32■■■□□ 2.71
SNX5-210ENST00000481323 ARAP1Q96P48 1450 aa31.92■■■□□ 2.7
SNX5-210ENST00000481323 KIF27Q86VH2 1401 aa31.92■■■□□ 2.7
SNX5-210ENST00000481323 NUP160Q12769 1436 aa31.9■■■□□ 2.7
SNX5-210ENST00000481323 IGF1RP08069 1367 aa31.88■■■□□ 2.69
SNX5-210ENST00000481323 CEP170Q5SW79 1584 aa31.88■■■□□ 2.69
SNX5-210ENST00000481323 ERCC6L2Q5T890 1561 aa31.68■■■□□ 2.66
SNX5-210ENST00000481323 CUL7Q14999 1698 aa31.68■■■□□ 2.66
SNX5-210ENST00000481323 CARMIL1Q5VZK9 1371 aa31.67■■■□□ 2.66
SNX5-210ENST00000481323 SHROOM2Q13796 1616 aa31.65■■■□□ 2.66
SNX5-210ENST00000481323 JPH4Q96JJ6 628 aa31.64■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms