RNA–Protein interactions for RNA: ENST00000455638.6

ARAP1-209, Transcript of ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1, humanhuman

TSL 5 BASIC

Gene ARAP1, Length 2,683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARAP1-209ENST00000455638 NISCHQ9Y2I1 1504 aa26.5■■□□□ 1.83
ARAP1-209ENST00000455638 SHROOM4Q9ULL8 1493 aa22.71■■□□□ 1.23
ARAP1-209ENST00000455638 CCDC180Q9P1Z9 1646 aa22.51■■□□□ 1.19
ARAP1-209ENST00000455638 ZCCHC6Q5VYS8 1495 aaKnown RBP22.37■■□□□ 1.17
ARAP1-209ENST00000455638 DCAF8L2P0C7V8 631 aa22.3■■□□□ 1.16
ARAP1-209ENST00000455638 SUPT5HO00267 1087 aaKnown RBP22.15■■□□□ 1.14
ARAP1-209ENST00000455638 DCAF1Q9Y4B6 1507 aa21.63■■□□□ 1.05
ARAP1-209ENST00000455638 CHIC1Q5VXU3 224 aa21.33■■□□□ 1.01
ARAP1-209ENST00000455638 SCRIBQ14160 1630 aa21.27■■□□□ 1
ARAP1-209ENST00000455638 ABCC9O60706 1549 aa21.26■□□□□ 0.99
ARAP1-209ENST00000455638 MYO15BQ96JP2 1530 aa21.24■□□□□ 0.99
ARAP1-209ENST00000455638 HRCP23327 699 aa21.16■□□□□ 0.98
ARAP1-209ENST00000455638 RSF1Q96T23 1441 aaPredicted RBP20.95■□□□□ 0.94
ARAP1-209ENST00000455638 PCGF6Q9BYE7 350 aa20.91■□□□□ 0.94
ARAP1-209ENST00000455638 NACADO15069 1562 aa20.9■□□□□ 0.94
ARAP1-209ENST00000455638 LOC105371045A0A1W2PR82 267 aa20.8■□□□□ 0.92
ARAP1-209ENST00000455638 CECR2Q9BXF3 1484 aa20.79■□□□□ 0.92
ARAP1-209ENST00000455638 RB1CC1Q8TDY2 1594 aa20.73■□□□□ 0.91
ARAP1-209ENST00000455638 PPARGC1BQ86YN6 1023 aaKnown RBP20.68■□□□□ 0.9
ARAP1-209ENST00000455638 MROH2BQ7Z745 1585 aa20.66■□□□□ 0.9
ARAP1-209ENST00000455638 TRIM41Q8WV44 630 aa20.57■□□□□ 0.88
ARAP1-209ENST00000455638 WIZO95785 1651 aa20.54■□□□□ 0.88
ARAP1-209ENST00000455638 FAM9AQ8IZU1 332 aaPredicted RBP20.52■□□□□ 0.88
ARAP1-209ENST00000455638 EHMT2Q96KQ7 1210 aa20.46■□□□□ 0.87
ARAP1-209ENST00000455638 TRIM26Q12899 539 aaPredicted RBP20.42■□□□□ 0.86
ARAP1-209ENST00000455638 PABPN1Q86U42 306 aaKnown RBP eCLIP20.37■□□□□ 0.851e-6■■□□□ 12
ARAP1-209ENST00000455638 BAZ1AQ9NRL2 1556 aaPredicted RBP20.35■□□□□ 0.85
ARAP1-209ENST00000455638 UNC13AQ9UPW8 1703 aa20.32■□□□□ 0.84
ARAP1-209ENST00000455638 SMARCA4P51532 1647 aa20.22■□□□□ 0.83
ARAP1-209ENST00000455638 PELP1Q8IZL8 1130 aaKnown RBP20.18■□□□□ 0.82
ARAP1-209ENST00000455638 TOP2AP11388 1531 aaKnown RBP20.14■□□□□ 0.82
ARAP1-209ENST00000455638 ZEB1P37275 1124 aaPredicted RBP20.12■□□□□ 0.81
ARAP1-209ENST00000455638 CCDC88BA6NC98 1476 aa20.12■□□□□ 0.81
ARAP1-209ENST00000455638 BICRAQ9NZM4 1560 aa20.11■□□□□ 0.81
ARAP1-209ENST00000455638 EIF4G1Q04637 1599 aaKnown RBP20.09■□□□□ 0.81
ARAP1-209ENST00000455638 ABCC8Q09428 1581 aa20.06■□□□□ 0.8
ARAP1-209ENST00000455638 SMARCA2P51531 1590 aa20.05■□□□□ 0.8
ARAP1-209ENST00000455638 SCAF1Q9H7N4 1312 aaKnown RBP19.92■□□□□ 0.78
ARAP1-209ENST00000455638 SOGA1O94964 1423 aa19.84■□□□□ 0.77
ARAP1-209ENST00000455638 ATAD2BQ9ULI0 1458 aa19.78■□□□□ 0.76
ARAP1-209ENST00000455638 RUSC2Q8N2Y8 1516 aa19.76■□□□□ 0.75
ARAP1-209ENST00000455638 PEG3Q9GZU2 1588 aa19.76■□□□□ 0.75
ARAP1-209ENST00000455638 BAZ1BQ9UIG0 1483 aaKnown RBP19.74■□□□□ 0.75
ARAP1-209ENST00000455638 TTBK1Q5TCY1 1321 aaPredicted RBP19.73■□□□□ 0.75
ARAP1-209ENST00000455638 WRNQ14191 1432 aaPredicted RBP eCLIP19.69■□□□□ 0.74
ARAP1-209ENST00000455638 CSRNP3Q8WYN3 585 aa19.67■□□□□ 0.74
ARAP1-209ENST00000455638 UBTFP17480 764 aaKnown RBP19.65■□□□□ 0.74
ARAP1-209ENST00000455638 CEP162Q5TB80 1403 aa19.62■□□□□ 0.73
ARAP1-209ENST00000455638 SYNJ1O43426 1573 aa19.6■□□□□ 0.73
ARAP1-209ENST00000455638 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.55■□□□□ 0.72
ARAP1-209ENST00000455638 EEA1Q15075 1411 aa19.54■□□□□ 0.72
ARAP1-209ENST00000455638 TNIKQ9UKE5 1360 aa19.54■□□□□ 0.72
ARAP1-209ENST00000455638 CCER1Q8TC90 406 aaPredicted RBP19.51■□□□□ 0.71
ARAP1-209ENST00000455638 GOLGA3Q08378 1498 aa19.48■□□□□ 0.71
ARAP1-209ENST00000455638 RANGAP1P46060 587 aaPredicted RBP19.47■□□□□ 0.71
ARAP1-209ENST00000455638 ACIN1Q9UKV3 1341 aaKnown RBP19.42■□□□□ 0.7
ARAP1-209ENST00000455638 NCAPD3P42695 1498 aa19.38■□□□□ 0.69
ARAP1-209ENST00000455638 CEP164Q9UPV0 1460 aa19.37■□□□□ 0.69
ARAP1-209ENST00000455638 NEUROD1Q13562 356 aa19.37■□□□□ 0.69
ARAP1-209ENST00000455638 MYT1Q01538 1121 aa19.36■□□□□ 0.69
ARAP1-209ENST00000455638 DIEXFQ68CQ4 756 aaKnown RBP19.34■□□□□ 0.69
ARAP1-209ENST00000455638 RAPGEF2Q9Y4G8 1499 aa19.34■□□□□ 0.69
ARAP1-209ENST00000455638 HMGXB3Q12766 1538 aa19.33■□□□□ 0.68
ARAP1-209ENST00000455638 TOP2BQ02880 1626 aa19.31■□□□□ 0.68
ARAP1-209ENST00000455638 KIF21BO75037 1637 aa19.3■□□□□ 0.68
ARAP1-209ENST00000455638 CLIP1P30622 1438 aa19.29■□□□□ 0.68
ARAP1-209ENST00000455638 CENPBP07199 599 aaPredicted RBP19.25■□□□□ 0.67
ARAP1-209ENST00000455638 CUX1P39880 1505 aa19.23■□□□□ 0.67
ARAP1-209ENST00000455638 GTF3C3Q9Y5Q9 886 aa19.22■□□□□ 0.67
ARAP1-209ENST00000455638 BIVM-ERCC5R4GMW8 1640 aa19.21■□□□□ 0.67
ARAP1-209ENST00000455638 CFTRP13569 1480 aa19.19■□□□□ 0.66
ARAP1-209ENST00000455638 VPS8Q8N3P4 1428 aa19.14■□□□□ 0.66
ARAP1-209ENST00000455638 HNRNPUL2Q1KMD3 747 aaKnown RBP19.14■□□□□ 0.65
ARAP1-209ENST00000455638 APLP2Q06481 763 aa19.12■□□□□ 0.65
ARAP1-209ENST00000455638 ZNF316A6NFI3 1004 aaPredicted RBP19.09■□□□□ 0.65
ARAP1-209ENST00000455638 PRXQ9BXM0 1461 aa19.09■□□□□ 0.65
ARAP1-209ENST00000455638 KIF27Q86VH2 1401 aa19.08■□□□□ 0.64
ARAP1-209ENST00000455638 CC2D2AQ9P2K1 1620 aa19.05■□□□□ 0.64
ARAP1-209ENST00000455638 CADPSQ9ULU8 1353 aa19.05■□□□□ 0.64
ARAP1-209ENST00000455638 ERICH3Q5RHP9 1530 aa19.01■□□□□ 0.63
ARAP1-209ENST00000455638 ARAP1Q96P48 1450 aa18.99■□□□□ 0.63
ARAP1-209ENST00000455638 CUX2O14529 1486 aa18.99■□□□□ 0.63
ARAP1-209ENST00000455638 KANK4Q5T7N3 995 aaPredicted RBP18.95■□□□□ 0.62
ARAP1-209ENST00000455638 FGD5Q6ZNL6 1462 aa18.94■□□□□ 0.62
ARAP1-209ENST00000455638 IGF1RP08069 1367 aa18.91■□□□□ 0.62
ARAP1-209ENST00000455638 PRDM2Q13029 1718 aa18.91■□□□□ 0.62
ARAP1-209ENST00000455638 YTHDC1Q96MU7 727 aaKnown RBP18.9■□□□□ 0.62
ARAP1-209ENST00000455638 NESP48681 1621 aa18.89■□□□□ 0.61
ARAP1-209ENST00000455638 FANCD2Q9BXW9 1451 aa18.89■□□□□ 0.61
ARAP1-209ENST00000455638 MIER1Q8N108 512 aa18.87■□□□□ 0.61
ARAP1-209ENST00000455638 ARHGAP35Q9NRY4 1499 aa18.86■□□□□ 0.61
ARAP1-209ENST00000455638 CARMIL1Q5VZK9 1371 aa18.84■□□□□ 0.61
ARAP1-209ENST00000455638 RAD54L2Q9Y4B4 1467 aa18.82■□□□□ 0.6
ARAP1-209ENST00000455638 DNAJC5BQ9UF47 199 aa18.82■□□□□ 0.6
ARAP1-209ENST00000455638 P3H3Q8IVL6 736 aa18.8■□□□□ 0.6
ARAP1-209ENST00000455638 ITGAEP38570 1179 aa18.77■□□□□ 0.59
ARAP1-209ENST00000455638 ATP1B4Q9UN42 357 aaPredicted RBP18.73■□□□□ 0.59
ARAP1-209ENST00000455638 TOPBP1Q92547 1522 aa18.73■□□□□ 0.59
ARAP1-209ENST00000455638 POLA1P09884 1462 aaPredicted RBP18.72■□□□□ 0.59
ARAP1-209ENST00000455638 DNMBPQ6XZF7 1577 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms