RNA–Protein interactions for RNA: ENST00000469704.1

SNX5-206, Transcript of sorting nexin 5, humanhuman

TSL 3

Gene SNX5, Length 696 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-206ENST00000469704 NISCHQ9Y2I1 1504 aa65.44■■■■■ 8.07
SNX5-206ENST00000469704 CCDC180Q9P1Z9 1646 aa58.38■■■■■ 6.94
SNX5-206ENST00000469704 ABCC9O60706 1549 aa57.51■■■■■ 6.8
SNX5-206ENST00000469704 RB1CC1Q8TDY2 1594 aa55.19■■■■■ 6.43
SNX5-206ENST00000469704 NACADO15069 1562 aa55.04■■■■■ 6.4
SNX5-206ENST00000469704 DCAF8L2P0C7V8 631 aa54.88■■■■■ 6.38
SNX5-206ENST00000469704 MYO15BQ96JP2 1530 aa54.6■■■■■ 6.33
SNX5-206ENST00000469704 ZCCHC6Q5VYS8 1495 aaKnown RBP54.37■■■■■ 6.29
SNX5-206ENST00000469704 DCAF1Q9Y4B6 1507 aa54.18■■■■■ 6.26
SNX5-206ENST00000469704 UNC13AQ9UPW8 1703 aa53.88■■■■■ 6.22
SNX5-206ENST00000469704 PABPN1Q86U42 306 aaKnown RBP eCLIP53.7■■■■■ 6.19
SNX5-206ENST00000469704 BICRAQ9NZM4 1560 aa53.5■■■■■ 6.16
SNX5-206ENST00000469704 DNAJC5BQ9UF47 199 aa53.28■■■■■ 6.12
SNX5-206ENST00000469704 SCRIBQ14160 1630 aa53.13■■■■■ 6.1
SNX5-206ENST00000469704 SHROOM4Q9ULL8 1493 aa52.98■■■■■ 6.07
SNX5-206ENST00000469704 EIF4G1Q04637 1599 aaKnown RBP52.13■■■■■ 5.94
SNX5-206ENST00000469704 CC2D2AQ9P2K1 1620 aa52.03■■■■■ 5.92
SNX5-206ENST00000469704 CECR2Q9BXF3 1484 aa51.78■■■■■ 5.88
SNX5-206ENST00000469704 SMARCA4P51532 1647 aa50.84■■■■■ 5.73
SNX5-206ENST00000469704 NCAPD3P42695 1498 aa50.81■■■■■ 5.72
SNX5-206ENST00000469704 BAZ1AQ9NRL2 1556 aaPredicted RBP50.76■■■■■ 5.72
SNX5-206ENST00000469704 ATAD2BQ9ULI0 1458 aa50.72■■■■■ 5.71
SNX5-206ENST00000469704 SMARCA2P51531 1590 aa50.65■■■■■ 5.7
SNX5-206ENST00000469704 HMGXB3Q12766 1538 aa50.46■■■■■ 5.67
SNX5-206ENST00000469704 PEG3Q9GZU2 1588 aa50.41■■■■■ 5.66
SNX5-206ENST00000469704 MROH2BQ7Z745 1585 aa50.38■■■■■ 5.66
SNX5-206ENST00000469704 BAZ1BQ9UIG0 1483 aaKnown RBP50.26■■■■■ 5.64
SNX5-206ENST00000469704 WIZO95785 1651 aa49.8■■■■■ 5.56
SNX5-206ENST00000469704 RSF1Q96T23 1441 aaPredicted RBP49.68■■■■■ 5.54
SNX5-206ENST00000469704 ERCC6Q03468 1493 aa49.64■■■■■ 5.54
SNX5-206ENST00000469704 NESP48681 1621 aa49.63■■■■■ 5.53
SNX5-206ENST00000469704 LAMC3Q9Y6N6 1575 aa49.52■■■■■ 5.52
SNX5-206ENST00000469704 CUX2O14529 1486 aa49.34■■■■■ 5.49
SNX5-206ENST00000469704 CADPSQ9ULU8 1353 aa49.29■■■■■ 5.48
SNX5-206ENST00000469704 TOP2AP11388 1531 aaKnown RBP49.26■■■■■ 5.48
SNX5-206ENST00000469704 PDS5BQ9NTI5 1447 aa49.23■■■■■ 5.47
SNX5-206ENST00000469704 KIF21AQ7Z4S6 1674 aa49.03■■■■■ 5.44
SNX5-206ENST00000469704 THOC2Q8NI27 1593 aaKnown RBP48.98■■■■■ 5.43
SNX5-206ENST00000469704 CFTRP13569 1480 aa48.89■■■■■ 5.42
SNX5-206ENST00000469704 CCDC88BA6NC98 1476 aa48.72■■■■■ 5.39
SNX5-206ENST00000469704 FANCD2Q9BXW9 1451 aa48.68■■■■■ 5.38
SNX5-206ENST00000469704 MRC2Q9UBG0 1479 aa48.68■■■■■ 5.38
SNX5-206ENST00000469704 CEP164Q9UPV0 1460 aa48.66■■■■■ 5.38
SNX5-206ENST00000469704 WDR62O43379 1518 aa48.53■■■■■ 5.36
SNX5-206ENST00000469704 DNAJC5Q9H3Z4 198 aa48.44■■■■■ 5.34
SNX5-206ENST00000469704 PRDM2Q13029 1718 aa48.44■■■■■ 5.34
SNX5-206ENST00000469704 URB2Q14146 1524 aaKnown RBP48.2■■■■■ 5.31
SNX5-206ENST00000469704 SUPT5HO00267 1087 aaKnown RBP48.05■■■■■ 5.28
SNX5-206ENST00000469704 ABCC8Q09428 1581 aa47.92■■■■■ 5.26
SNX5-206ENST00000469704 TOPBP1Q92547 1522 aa47.84■■■■■ 5.25
SNX5-206ENST00000469704 DNMBPQ6XZF7 1577 aa47.75■■■■■ 5.23
SNX5-206ENST00000469704 IFT140Q96RY7 1462 aa47.69■■■■■ 5.22
SNX5-206ENST00000469704 ZNF608Q9ULD9 1512 aaPredicted RBP47.46■■■■■ 5.19
SNX5-206ENST00000469704 POLA1P09884 1462 aaPredicted RBP47.4■■■■■ 5.18
SNX5-206ENST00000469704 TARBP1Q13395 1621 aaKnown RBP47.36■■■■■ 5.17
SNX5-206ENST00000469704 CUX1P39880 1505 aa47.29■■■■■ 5.16
SNX5-206ENST00000469704 OSCARQ8IYS5 282 aa47.28■■■■■ 5.16
SNX5-206ENST00000469704 SOGA1O94964 1423 aa47.25■■■■■ 5.15
SNX5-206ENST00000469704 EIF4G3O43432 1585 aaKnown RBP47.23■■■■■ 5.15
SNX5-206ENST00000469704 FGD5Q6ZNL6 1462 aa47.21■■■■■ 5.15
SNX5-206ENST00000469704 RAD54L2Q9Y4B4 1467 aa47.19■■■■■ 5.14
SNX5-206ENST00000469704 AQRO60306 1485 aaKnown RBP eCLIP47.16■■■■■ 5.142e-7■■■■□ 20.8
SNX5-206ENST00000469704 WDR97A6NE52 1622 aa47.01■■■■■ 5.12
SNX5-206ENST00000469704 TDRD9Q8NDG6 1382 aaKnown RBP47.01■■■■■ 5.12
SNX5-206ENST00000469704 WRNQ14191 1432 aaPredicted RBP eCLIP46.85■■■■■ 5.096e-6■■■□□ 16.7
SNX5-206ENST00000469704 TOP2BQ02880 1626 aa46.79■■■■■ 5.08
SNX5-206ENST00000469704 BIVM-ERCC5R4GMW8 1640 aa46.78■■■■■ 5.08
SNX5-206ENST00000469704 ABCA10Q8WWZ4 1543 aa46.77■■■■■ 5.08
SNX5-206ENST00000469704 GRIN2BQ13224 1484 aa46.74■■■■■ 5.07
SNX5-206ENST00000469704 CHD1O14646 1710 aa46.73■■■■■ 5.07
SNX5-206ENST00000469704 FBLN2P98095 1184 aa46.71■■■■■ 5.07
SNX5-206ENST00000469704 SYNJ1O43426 1573 aa46.69■■■■■ 5.06
SNX5-206ENST00000469704 GAPVD1Q14C86 1478 aa46.68■■■■■ 5.06
SNX5-206ENST00000469704 SNAPC4Q5SXM2 1469 aa46.68■■■■■ 5.06
SNX5-206ENST00000469704 MAGI1Q96QZ7 1491 aaPredicted RBP46.66■■■■■ 5.06
SNX5-206ENST00000469704 ABCA5Q8WWZ7 1642 aa46.57■■■■■ 5.05
SNX5-206ENST00000469704 CHMP7Q8WUX9 453 aaPredicted RBP46.56■■■■■ 5.04
SNX5-206ENST00000469704 PBRM1Q86U86 1689 aa46.55■■■■■ 5.04
SNX5-206ENST00000469704 TRIM41Q8WV44 630 aa46.53■■■■■ 5.04
SNX5-206ENST00000469704 SYNJ2O15056 1496 aa46.49■■■■■ 5.03
SNX5-206ENST00000469704 RIMBP3CA6NJZ7 1639 aa46.44■■■■■ 5.03
SNX5-206ENST00000469704 RIMBP3BA6NNM3 1639 aa46.44■■■■■ 5.03
SNX5-206ENST00000469704 RIMBP3Q9UFD9 1639 aa46.44■■■■■ 5.03
SNX5-206ENST00000469704 ARHGEF11O15085 1522 aa46.4■■■■■ 5.02
SNX5-206ENST00000469704 CLASP1Q7Z460 1538 aa46.24■■■■■ 4.99
SNX5-206ENST00000469704 ERICH3Q5RHP9 1530 aa46.22■■■■■ 4.99
SNX5-206ENST00000469704 ADAMTS12P58397 1594 aa46.13■■■■■ 4.98
SNX5-206ENST00000469704 FHAD1B1AJZ9 1412 aa46.13■■■■■ 4.98
SNX5-206ENST00000469704 GRIN2AQ12879 1464 aa46.12■■■■■ 4.97
SNX5-206ENST00000469704 CYB5RLQ6IPT4 315 aa46.06■■■■■ 4.96
SNX5-206ENST00000469704 ARAP1Q96P48 1450 aa45.97■■■■■ 4.95
SNX5-206ENST00000469704 NUP160Q12769 1436 aa45.94■■■■■ 4.95
SNX5-206ENST00000469704 KIF27Q86VH2 1401 aa45.94■■■■■ 4.94
SNX5-206ENST00000469704 CEP170Q5SW79 1584 aa45.86■■■■■ 4.93
SNX5-206ENST00000469704 IGF1RP08069 1367 aa45.83■■■■■ 4.93
SNX5-206ENST00000469704 CUL7Q14999 1698 aa45.67■■■■■ 4.9
SNX5-206ENST00000469704 SHROOM2Q13796 1616 aa45.63■■■■■ 4.9
SNX5-206ENST00000469704 JPH4Q96JJ6 628 aa45.54■■■■■ 4.88
SNX5-206ENST00000469704 CARMIL1Q5VZK9 1371 aa45.54■■■■■ 4.88
SNX5-206ENST00000469704 ERCC6L2Q5T890 1561 aa45.52■■■■■ 4.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms