RNA–Protein interactions for RNA: ENST00000465288.5

TFRC-210, Transcript of transferrin receptor, humanhuman

TSL 5

Gene TFRC, Length 560 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFRC-210ENST00000465288 AEBP2Q6ZN18 517 aaPredicted RBP28.24■■■□□ 2.11
TFRC-210ENST00000465288 CHIC1Q5VXU3 224 aa27.13■■□□□ 1.93
TFRC-210ENST00000465288 SENP3Q9H4L4 574 aaPredicted RBP23.96■■□□□ 1.43
TFRC-210ENST00000465288 PHF23Q9BUL5 403 aaPredicted RBP23.86■■□□□ 1.41
TFRC-210ENST00000465288 FOXD1Q16676 465 aa22.35■■□□□ 1.17
TFRC-210ENST00000465288 PLPPR3Q6T4P5 718 aa21.81■■□□□ 1.08
TFRC-210ENST00000465288 PPP6R1Q9UPN7 881 aa21.21■□□□□ 0.99
TFRC-210ENST00000465288 ADRA2BP18089 450 aa21.14■□□□□ 0.97
TFRC-210ENST00000465288 PIAS4Q8N2W9 510 aaPredicted RBP20.93■□□□□ 0.94
TFRC-210ENST00000465288 NISCHQ9Y2I1 1504 aa20.78■□□□□ 0.92
TFRC-210ENST00000465288 MSH5O43196 834 aa20.71■□□□□ 0.91
TFRC-210ENST00000465288 POTEDQ86YR6 584 aa19.67■□□□□ 0.74
TFRC-210ENST00000465288 MAPK8IP2Q13387 824 aaPredicted RBP19.33■□□□□ 0.68
TFRC-210ENST00000465288 SCAF1Q9H7N4 1312 aaKnown RBP19.26■□□□□ 0.67
TFRC-210ENST00000465288 PPP4R3CPQ6ZMV5 832 aa19.19■□□□□ 0.66
TFRC-210ENST00000465288 DMRT2Q9Y5R5 561 aa19.08■□□□□ 0.64
TFRC-210ENST00000465288 CNKSR2Q8WXI2 1034 aa18.73■□□□□ 0.59
TFRC-210ENST00000465288 HOXD11P31277 338 aaPredicted RBP18.52■□□□□ 0.56
TFRC-210ENST00000465288 NCBP3Q53F19 620 aaKnown RBP18.52■□□□□ 0.56
TFRC-210ENST00000465288 RNF216Q9NWF9 866 aaPredicted RBP18.47■□□□□ 0.55
TFRC-210ENST00000465288 CCDC180Q9P1Z9 1646 aa18.43■□□□□ 0.54
TFRC-210ENST00000465288 NPM3O75607 178 aaKnown RBP18.29■□□□□ 0.52
TFRC-210ENST00000465288 KCNA4P22459 653 aa18.28■□□□□ 0.52
TFRC-210ENST00000465288 DCAF8L1A6NGE4 600 aa18.27■□□□□ 0.52
TFRC-210ENST00000465288 ABCC9O60706 1549 aa18.2■□□□□ 0.5
TFRC-210ENST00000465288 DNAJC5BQ9UF47 199 aa17.8■□□□□ 0.44
TFRC-210ENST00000465288 RNF39Q9H2S5 420 aa17.74■□□□□ 0.43
TFRC-210ENST00000465288 DCAF8L2P0C7V8 631 aa17.68■□□□□ 0.42
TFRC-210ENST00000465288 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.64■□□□□ 0.41
TFRC-210ENST00000465288 CACNB1Q02641 598 aaPredicted RBP17.58■□□□□ 0.4
TFRC-210ENST00000465288 C1QBPQ07021 282 aaKnown RBP17.48■□□□□ 0.39
TFRC-210ENST00000465288 RB1CC1Q8TDY2 1594 aa17.43■□□□□ 0.38
TFRC-210ENST00000465288 SLC4A2P04920 1241 aa17.41■□□□□ 0.38
TFRC-210ENST00000465288 NACADO15069 1562 aa17.38■□□□□ 0.37
TFRC-210ENST00000465288 U3KPZ7 1027 aaPredicted RBP17.33■□□□□ 0.36
TFRC-210ENST00000465288 SLC4A1APQ9BWU0 796 aaKnown RBP17.29■□□□□ 0.36
TFRC-210ENST00000465288 ZCCHC6Q5VYS8 1495 aaKnown RBP17.25■□□□□ 0.35
TFRC-210ENST00000465288 MYO15BQ96JP2 1530 aa17.19■□□□□ 0.34
TFRC-210ENST00000465288 DCAF1Q9Y4B6 1507 aa17.12■□□□□ 0.33
TFRC-210ENST00000465288 PABPN1Q86U42 306 aaKnown RBP eCLIP17.08■□□□□ 0.32
TFRC-210ENST00000465288 UNC13AQ9UPW8 1703 aa16.99■□□□□ 0.31
TFRC-210ENST00000465288 SPINK5Q9NQ38 1064 aaPredicted RBP16.98■□□□□ 0.31
TFRC-210ENST00000465288 SCRIBQ14160 1630 aa16.9■□□□□ 0.3
TFRC-210ENST00000465288 CAPN15O75808 1086 aa16.9■□□□□ 0.3
TFRC-210ENST00000465288 FOXD4L1Q9NU39 408 aa16.9■□□□□ 0.3
TFRC-210ENST00000465288 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.89■□□□□ 0.29
TFRC-210ENST00000465288 HNRNPUL2Q1KMD3 747 aaKnown RBP16.89■□□□□ 0.29
TFRC-210ENST00000465288 MYCNP04198 464 aaPredicted RBP16.87■□□□□ 0.29
TFRC-210ENST00000465288 BICRAQ9NZM4 1560 aa16.85■□□□□ 0.29
TFRC-210ENST00000465288 SAMD1Q6SPF0 538 aaPredicted RBP16.83■□□□□ 0.28
TFRC-210ENST00000465288 ZBTB22O15209 634 aa16.82■□□□□ 0.28
TFRC-210ENST00000465288 APLP2Q06481 763 aa16.79■□□□□ 0.28
TFRC-210ENST00000465288 DSG3P32926 999 aa16.75■□□□□ 0.27
TFRC-210ENST00000465288 TRHP20396 242 aaPredicted RBP16.73■□□□□ 0.27
TFRC-210ENST00000465288 ZNF219Q9P2Y4 722 aaPredicted RBP16.67■□□□□ 0.26
TFRC-210ENST00000465288 SHROOM4Q9ULL8 1493 aa16.61■□□□□ 0.25
TFRC-210ENST00000465288 ABCB7O75027 752 aa16.57■□□□□ 0.24
TFRC-210ENST00000465288 ATF5Q9Y2D1 282 aaPredicted RBP16.53■□□□□ 0.24
TFRC-210ENST00000465288 EIF4G1Q04637 1599 aaKnown RBP16.43■□□□□ 0.22
TFRC-210ENST00000465288 CC2D2AQ9P2K1 1620 aa16.4■□□□□ 0.22
TFRC-210ENST00000465288 POLA2Q14181 598 aa16.38■□□□□ 0.21
TFRC-210ENST00000465288 CSRNP3Q8WYN3 585 aa16.37■□□□□ 0.21
TFRC-210ENST00000465288 ATXN8OSP0DMR3 200 aa16.34■□□□□ 0.21
TFRC-210ENST00000465288 CECR2Q9BXF3 1484 aa16.32■□□□□ 0.2
TFRC-210ENST00000465288 EHMT2Q96KQ7 1210 aa16.31■□□□□ 0.2
TFRC-210ENST00000465288 SMARCA4P51532 1647 aa16.12■□□□□ 0.17
TFRC-210ENST00000465288 BAZ1AQ9NRL2 1556 aaPredicted RBP16.11■□□□□ 0.17
TFRC-210ENST00000465288 ATAD2BQ9ULI0 1458 aa16.06■□□□□ 0.16
TFRC-210ENST00000465288 NCAPD3P42695 1498 aa16.05■□□□□ 0.16
TFRC-210ENST00000465288 SMARCA2P51531 1590 aa16.04■□□□□ 0.16
TFRC-210ENST00000465288 MROH2BQ7Z745 1585 aa16.04■□□□□ 0.16
TFRC-210ENST00000465288 ZBTB12Q9Y330 459 aaPredicted RBP16■□□□□ 0.15
TFRC-210ENST00000465288 BAZ1BQ9UIG0 1483 aaKnown RBP15.96■□□□□ 0.14
TFRC-210ENST00000465288 HMGXB3Q12766 1538 aa15.91■□□□□ 0.14
TFRC-210ENST00000465288 RBM42Q9BTD8 480 aaKnown RBP15.9■□□□□ 0.14
TFRC-210ENST00000465288 PEG3Q9GZU2 1588 aa15.9■□□□□ 0.14
TFRC-210ENST00000465288 WIZO95785 1651 aa15.89■□□□□ 0.13
TFRC-210ENST00000465288 RSF1Q96T23 1441 aaPredicted RBP15.85■□□□□ 0.13
TFRC-210ENST00000465288 OSCARQ8IYS5 282 aa15.82■□□□□ 0.12
TFRC-210ENST00000465288 FBLN2P98095 1184 aa15.78■□□□□ 0.12
TFRC-210ENST00000465288 MKRN4PQ13434 485 aaPredicted RBP15.78■□□□□ 0.12
TFRC-210ENST00000465288 NESP48681 1621 aa15.72■□□□□ 0.11
TFRC-210ENST00000465288 ERCC6Q03468 1493 aa15.7■□□□□ 0.1
TFRC-210ENST00000465288 TOP2AP11388 1531 aaKnown RBP15.66■□□□□ 0.1
TFRC-210ENST00000465288 AKT1S1Q96B36 256 aa15.65■□□□□ 0.1
TFRC-210ENST00000465288 SUPT5HO00267 1087 aaKnown RBP15.64■□□□□ 0.09
TFRC-210ENST00000465288 CADPSQ9ULU8 1353 aa15.62■□□□□ 0.09
TFRC-210ENST00000465288 LAMC3Q9Y6N6 1575 aa15.62■□□□□ 0.09
TFRC-210ENST00000465288 PDS5BQ9NTI5 1447 aa15.58■□□□□ 0.08
TFRC-210ENST00000465288 SPDYE2BA6NHP3 402 aa15.57■□□□□ 0.08
TFRC-210ENST00000465288 SPDYE6P0CI01 402 aa15.57■□□□□ 0.08
TFRC-210ENST00000465288 SPDYE2Q495Y8 402 aa15.57■□□□□ 0.08
TFRC-210ENST00000465288 CCDC88BA6NC98 1476 aa15.54■□□□□ 0.08
TFRC-210ENST00000465288 REM2Q8IYK8 340 aaPredicted RBP15.53■□□□□ 0.08
TFRC-210ENST00000465288 KIF21AQ7Z4S6 1674 aa15.49■□□□□ 0.07
TFRC-210ENST00000465288 CFTRP13569 1480 aa15.47■□□□□ 0.07
TFRC-210ENST00000465288 POTEHQ6S545 545 aa15.47■□□□□ 0.07
TFRC-210ENST00000465288 ZNF692Q9BU19 519 aaPredicted RBP15.46■□□□□ 0.07
TFRC-210ENST00000465288 CHRDL2Q6WN34 429 aa15.45■□□□□ 0.06
TFRC-210ENST00000465288 CUX2O14529 1486 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms