RNA–Protein interactions for RNA: ENST00000475593.5

TFRC-211, Transcript of transferrin receptor, humanhuman

TSL 3

Gene TFRC, Length 875 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFRC-211ENST00000475593 AEBP2Q6ZN18 517 aaPredicted RBP18.46■□□□□ 0.55
TFRC-211ENST00000475593 CHIC1Q5VXU3 224 aa17.19■□□□□ 0.34
TFRC-211ENST00000475593 SENP3Q9H4L4 574 aaPredicted RBP15.67■□□□□ 0.1
TFRC-211ENST00000475593 PHF23Q9BUL5 403 aaPredicted RBP15.5■□□□□ 0.07
TFRC-211ENST00000475593 NISCHQ9Y2I1 1504 aa15.3■□□□□ 0.04
TFRC-211ENST00000475593 FOXD1Q16676 465 aa14.72□□□□□ -0.05
TFRC-211ENST00000475593 ABCC9O60706 1549 aa14.6□□□□□ -0.07
TFRC-211ENST00000475593 DNAJC5BQ9UF47 199 aa14.19□□□□□ -0.14
TFRC-211ENST00000475593 POTEDQ86YR6 584 aa14.02□□□□□ -0.17
TFRC-211ENST00000475593 CCDC180Q9P1Z9 1646 aa13.94□□□□□ -0.18
TFRC-211ENST00000475593 MSH5O43196 834 aa13.78□□□□□ -0.2
TFRC-211ENST00000475593 PIAS4Q8N2W9 510 aaPredicted RBP13.65□□□□□ -0.22
TFRC-211ENST00000475593 PPP6R1Q9UPN7 881 aa13.61□□□□□ -0.23
TFRC-211ENST00000475593 PLPPR3Q6T4P5 718 aa13.57□□□□□ -0.24
TFRC-211ENST00000475593 PABPN1Q86U42 306 aaKnown RBP eCLIP13.56□□□□□ -0.24
TFRC-211ENST00000475593 RB1CC1Q8TDY2 1594 aa13.55□□□□□ -0.24
TFRC-211ENST00000475593 ADRA2BP18089 450 aa13.53□□□□□ -0.24
TFRC-211ENST00000475593 UNC13AQ9UPW8 1703 aa13.4□□□□□ -0.26
TFRC-211ENST00000475593 DCAF8L2P0C7V8 631 aa13.4□□□□□ -0.26
TFRC-211ENST00000475593 DNAJC5Q9H3Z4 198 aa13.34□□□□□ -0.27
TFRC-211ENST00000475593 NACADO15069 1562 aa13.29□□□□□ -0.28
TFRC-211ENST00000475593 BICRAQ9NZM4 1560 aa13.2□□□□□ -0.3
TFRC-211ENST00000475593 CECR2Q9BXF3 1484 aa13.14□□□□□ -0.31
TFRC-211ENST00000475593 CC2D2AQ9P2K1 1620 aa13.13□□□□□ -0.31
TFRC-211ENST00000475593 EIF4G1Q04637 1599 aaKnown RBP12.91□□□□□ -0.34
TFRC-211ENST00000475593 MYO15BQ96JP2 1530 aa12.82□□□□□ -0.36
TFRC-211ENST00000475593 SCRIBQ14160 1630 aa12.8□□□□□ -0.36
TFRC-211ENST00000475593 SHROOM4Q9ULL8 1493 aa12.77□□□□□ -0.37
TFRC-211ENST00000475593 TRIM41Q8WV44 630 aa12.69□□□□□ -0.38
TFRC-211ENST00000475593 CUX2O14529 1486 aa12.65□□□□□ -0.38
TFRC-211ENST00000475593 ERCC6Q03468 1493 aa12.61□□□□□ -0.39
TFRC-211ENST00000475593 MAPK8IP2Q13387 824 aaPredicted RBP12.55□□□□□ -0.4
TFRC-211ENST00000475593 ZCCHC6Q5VYS8 1495 aaKnown RBP12.53□□□□□ -0.4
TFRC-211ENST00000475593 DCAF1Q9Y4B6 1507 aa12.49□□□□□ -0.41
TFRC-211ENST00000475593 DMRT2Q9Y5R5 561 aa12.41□□□□□ -0.42
TFRC-211ENST00000475593 NESP48681 1621 aa12.39□□□□□ -0.43
TFRC-211ENST00000475593 THOC2Q8NI27 1593 aaKnown RBP12.29□□□□□ -0.44
TFRC-211ENST00000475593 NCAPD3P42695 1498 aa12.26□□□□□ -0.45
TFRC-211ENST00000475593 SMARCA2P51531 1590 aa12.26□□□□□ -0.45
TFRC-211ENST00000475593 KIF21AQ7Z4S6 1674 aa12.24□□□□□ -0.45
TFRC-211ENST00000475593 SCAF1Q9H7N4 1312 aaKnown RBP12.23□□□□□ -0.45
TFRC-211ENST00000475593 ATAD2BQ9ULI0 1458 aa12.2□□□□□ -0.46
TFRC-211ENST00000475593 HMGXB3Q12766 1538 aa12.11□□□□□ -0.47
TFRC-211ENST00000475593 BAZ1AQ9NRL2 1556 aaPredicted RBP12.11□□□□□ -0.47
TFRC-211ENST00000475593 LAMC3Q9Y6N6 1575 aa12.1□□□□□ -0.47
TFRC-211ENST00000475593 OSCARQ8IYS5 282 aa12.09□□□□□ -0.47
TFRC-211ENST00000475593 SMARCA4P51532 1647 aa12.08□□□□□ -0.48
TFRC-211ENST00000475593 BAZ1BQ9UIG0 1483 aaKnown RBP12.08□□□□□ -0.48
TFRC-211ENST00000475593 PDS5BQ9NTI5 1447 aa12.05□□□□□ -0.48
TFRC-211ENST00000475593 CACNB1Q02641 598 aaPredicted RBP12.05□□□□□ -0.48
TFRC-211ENST00000475593 RIMBP3CA6NJZ7 1639 aa12.02□□□□□ -0.49
TFRC-211ENST00000475593 RIMBP3BA6NNM3 1639 aa12.02□□□□□ -0.49
TFRC-211ENST00000475593 RIMBP3Q9UFD9 1639 aa12.02□□□□□ -0.49
TFRC-211ENST00000475593 TRHP20396 242 aaPredicted RBP12□□□□□ -0.49
TFRC-211ENST00000475593 MRC2Q9UBG0 1479 aa11.99□□□□□ -0.49
TFRC-211ENST00000475593 WDR62O43379 1518 aa11.96□□□□□ -0.5
TFRC-211ENST00000475593 DCAF8L1A6NGE4 600 aa11.95□□□□□ -0.5
TFRC-211ENST00000475593 CYB5RLQ6IPT4 315 aa11.92□□□□□ -0.5
TFRC-211ENST00000475593 PPP4R3CPQ6ZMV5 832 aa11.9□□□□□ -0.5
TFRC-211ENST00000475593 CADPSQ9ULU8 1353 aa11.9□□□□□ -0.5
TFRC-211ENST00000475593 PEG3Q9GZU2 1588 aa11.87□□□□□ -0.51
TFRC-211ENST00000475593 ARHGEF11O15085 1522 aa11.86□□□□□ -0.51
TFRC-211ENST00000475593 CEP164Q9UPV0 1460 aa11.85□□□□□ -0.51
TFRC-211ENST00000475593 MROH2BQ7Z745 1585 aa11.84□□□□□ -0.51
TFRC-211ENST00000475593 HOXD11P31277 338 aaPredicted RBP11.84□□□□□ -0.51
TFRC-211ENST00000475593 FANCD2Q9BXW9 1451 aa11.8□□□□□ -0.52
TFRC-211ENST00000475593 RNF39Q9H2S5 420 aa11.79□□□□□ -0.52
TFRC-211ENST00000475593 URB2Q14146 1524 aaKnown RBP11.76□□□□□ -0.53
TFRC-211ENST00000475593 WIZO95785 1651 aa11.75□□□□□ -0.53
TFRC-211ENST00000475593 ZNF608Q9ULD9 1512 aaPredicted RBP11.73□□□□□ -0.53
TFRC-211ENST00000475593 CHD1O14646 1710 aa11.72□□□□□ -0.53
TFRC-211ENST00000475593 ARAP1Q96P48 1450 aa11.71□□□□□ -0.53
TFRC-211ENST00000475593 CNKSR2Q8WXI2 1034 aa11.7□□□□□ -0.54
TFRC-211ENST00000475593 FBLN2P98095 1184 aa11.69□□□□□ -0.54
TFRC-211ENST00000475593 RNF216Q9NWF9 866 aaPredicted RBP11.66□□□□□ -0.54
TFRC-211ENST00000475593 CFTRP13569 1480 aa11.63□□□□□ -0.55
TFRC-211ENST00000475593 EIF4G3O43432 1585 aaKnown RBP11.61□□□□□ -0.55
TFRC-211ENST00000475593 IFT140Q96RY7 1462 aa11.6□□□□□ -0.55
TFRC-211ENST00000475593 PRDM2Q13029 1718 aa11.58□□□□□ -0.56
TFRC-211ENST00000475593 AQRO60306 1485 aaKnown RBP eCLIP11.57□□□□□ -0.568e-11■■■■□ 25
TFRC-211ENST00000475593 ILDR1Q86SU0 546 aaPredicted RBP11.57□□□□□ -0.56
TFRC-211ENST00000475593 C1QBPQ07021 282 aaKnown RBP11.56□□□□□ -0.56
TFRC-211ENST00000475593 RSF1Q96T23 1441 aaPredicted RBP11.53□□□□□ -0.56
TFRC-211ENST00000475593 TOPBP1Q92547 1522 aa11.52□□□□□ -0.57
TFRC-211ENST00000475593 TARBP1Q13395 1621 aaKnown RBP11.46□□□□□ -0.57
TFRC-211ENST00000475593 CHMP7Q8WUX9 453 aaPredicted RBP11.44□□□□□ -0.58
TFRC-211ENST00000475593 TOP2AP11388 1531 aaKnown RBP11.43□□□□□ -0.58
TFRC-211ENST00000475593 CLASP1Q7Z460 1538 aa11.42□□□□□ -0.58
TFRC-211ENST00000475593 TDRD9Q8NDG6 1382 aaKnown RBP11.41□□□□□ -0.58
TFRC-211ENST00000475593 DNMBPQ6XZF7 1577 aa11.41□□□□□ -0.58
TFRC-211ENST00000475593 RAD54L2Q9Y4B4 1467 aa11.4□□□□□ -0.58
TFRC-211ENST00000475593 SYNJ1O43426 1573 aa11.4□□□□□ -0.58
TFRC-211ENST00000475593 GAPVD1Q14C86 1478 aa11.39□□□□□ -0.59
TFRC-211ENST00000475593 SNAPC4Q5SXM2 1469 aa11.39□□□□□ -0.59
TFRC-211ENST00000475593 ABCC8Q09428 1581 aa11.39□□□□□ -0.59
TFRC-211ENST00000475593 CCDC88BA6NC98 1476 aa11.37□□□□□ -0.59
TFRC-211ENST00000475593 KIF13AQ9H1H9 1805 aa11.37□□□□□ -0.59
TFRC-211ENST00000475593 POLA1P09884 1462 aaPredicted RBP11.36□□□□□ -0.59
TFRC-211ENST00000475593 SOGA1O94964 1423 aa11.34□□□□□ -0.59
TFRC-211ENST00000475593 KDM4FA0A1W2PPD8 638 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms