Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 ADGRB3-202ENST00000370598 6010 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.045e-6■■■■□ 21
CSTF2TQ9H0L4 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.065e-6■■■■□ 21
CSTF2TQ9H0L4 HSDL1-208ENST00000619773 3059 nt8.11□□□□□ -1.115e-6■■■■□ 21
CSTF2TQ9H0L4 MANBA-207ENST00000514430 7444 ntTSL 28.03□□□□□ -1.125e-6■■■■□ 21
CSTF2TQ9H0L4 CREG1-202ENST00000466652 794 ntTSL 37.82□□□□□ -1.165e-6■■■■□ 21
CSTF2TQ9H0L4 ZNF253-202ENST00000589668 297 ntTSL 27.74□□□□□ -1.175e-6■■■■□ 21
CSTF2TQ9H0L4 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC7.7□□□□□ -1.185e-6■■■■□ 21
CSTF2TQ9H0L4 FAM214A-207ENST00000562135 581 ntTSL 57.27□□□□□ -1.253e-9■■■■□ 21
CSTF2TQ9H0L4 CHCHD3-205ENST00000481152 1367 ntTSL 26.79□□□□□ -1.325e-6■■■■□ 21
CSTF2TQ9H0L4 RRM1-210ENST00000532170 3166 ntTSL 26.77□□□□□ -1.335e-6■■■■□ 21
CSTF2TQ9H0L4 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.335e-6■■■■□ 21
CSTF2TQ9H0L4 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.395e-6■■■■□ 21
CSTF2TQ9H0L4 FAM214A-202ENST00000399202 3048 ntTSL 1 (best)6.32□□□□□ -1.43e-9■■■■□ 21
CSTF2TQ9H0L4 ACSS2-204ENST00000464399 358 ntTSL 56.29□□□□□ -1.45e-6■■■■□ 21
CSTF2TQ9H0L4 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.09□□□□□ -1.435e-6■■■■□ 21
CSTF2TQ9H0L4 RRM1-212ENST00000533349 2863 ntTSL 26□□□□□ -1.455e-6■■■■□ 21
CSTF2TQ9H0L4 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.465e-6■■■■□ 21
CSTF2TQ9H0L4 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.485e-6■■■■□ 21
CSTF2TQ9H0L4 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.495e-6■■■■□ 21
CSTF2TQ9H0L4 RRM1-213ENST00000533495 2381 ntTSL 25.44□□□□□ -1.545e-6■■■■□ 21
CSTF2TQ9H0L4 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.635e-6■■■■□ 21
CSTF2TQ9H0L4 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.695e-6■■■■□ 21
CSTF2TQ9H0L4 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.681e-6■■■■□ 21
CSTF2TQ9H0L4 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.331e-6■■■■□ 21
CSTF2TQ9H0L4 LRP5L-205ENST00000468442 600 ntTSL 39.56□□□□□ -0.881e-6■■■■□ 21
CSTF2TQ9H0L4 CMIP-211ENST00000621537 4000 ntTSL 5 BASIC10.98□□□□□ -0.656e-7■■■■□ 21
CSTF2TQ9H0L4 ANKRD11-210ENST00000566858 580 ntTSL 415.08■□□□□ 06e-7■■■■□ 21
CSTF2TQ9H0L4 AGRN-205ENST00000469403 899 ntTSL 324.28■■□□□ 1.482e-8■■■■□ 21
CSTF2TQ9H0L4 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.721e-8■■■■□ 21
CSTF2TQ9H0L4 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.181e-8■■■■□ 21
CSTF2TQ9H0L4 PALM-203ENST00000586055 594 ntTSL 426.52■■□□□ 1.842e-6■■■■□ 21
CSTF2TQ9H0L4 AP2A2-206ENST00000525891 743 ntTSL 418.63■□□□□ 0.573e-7■■■■□ 20.9
CSTF2TQ9H0L4 CDKN1A-206ENST00000462537 553 ntTSL 317.36■□□□□ 0.371e-8■■■■□ 20.9
CSTF2TQ9H0L4 CDKN1A-205ENST00000459970 604 ntTSL 516.96■□□□□ 0.311e-8■■■■□ 20.9
CSTF2TQ9H0L4 CDKN1A-207ENST00000478800 616 ntTSL 215.93■□□□□ 0.141e-8■■■■□ 20.9
CSTF2TQ9H0L4 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.071e-8■■■■□ 20.9
CSTF2TQ9H0L4 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.041e-8■■■■□ 20.9
CSTF2TQ9H0L4 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.031e-8■■■■□ 20.9
CSTF2TQ9H0L4 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.131e-8■■■■□ 20.9
CSTF2TQ9H0L4 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.251e-8■■■■□ 20.9
CSTF2TQ9H0L4 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.47■■□□□ 1.352e-7■■■■□ 20.9
CSTF2TQ9H0L4 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.942e-7■■■■□ 20.9
CSTF2TQ9H0L4 CTBP1-208ENST00000506180 843 ntTSL 517.32■□□□□ 0.362e-7■■■■□ 20.9
CSTF2TQ9H0L4 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.598e-7■■■■□ 20.9
CSTF2TQ9H0L4 MTG1-204ENST00000473735 2212 ntTSL 520.5■□□□□ 0.872e-11■■■■□ 20.9
CSTF2TQ9H0L4 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.03■□□□□ 0.322e-11■■■■□ 20.9
CSTF2TQ9H0L4 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.312e-11■■■■□ 20.9
CSTF2TQ9H0L4 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.132e-11■■■■□ 20.9
CSTF2TQ9H0L4 MTG1-202ENST00000432508 953 ntTSL 215.35■□□□□ 0.052e-11■■■■□ 20.9
CSTF2TQ9H0L4 RPH3AL-204ENST00000570638 537 ntTSL 514.44□□□□□ -0.16e-7■■■■□ 20.9
CSTF2TQ9H0L4 MGA-210ENST00000568630 584 ntTSL 314.24□□□□□ -0.132e-6■■■■□ 20.9
CSTF2TQ9H0L4 MGA-204ENST00000563576 3537 ntTSL 510.14□□□□□ -0.792e-6■■■■□ 20.9
CSTF2TQ9H0L4 DNM1-209ENST00000493925 728 ntTSL 315.72■□□□□ 0.113e-6■■■■□ 20.9
CSTF2TQ9H0L4 DNM1-205ENST00000463998 871 ntTSL 414.37□□□□□ -0.113e-6■■■■□ 20.9
CSTF2TQ9H0L4 DNM1-215ENST00000631179 357 ntTSL 38.55□□□□□ -1.043e-6■■■■□ 20.9
CSTF2TQ9H0L4 DNM1-220ENST00000636201 100 ntTSL 53.19□□□□□ -1.93e-6■■■■□ 20.9
CSTF2TQ9H0L4 RPH3AL-220ENST00000576420 820 ntAPPRIS ALT2 TSL 314.86□□□□□ -0.036e-7■■■■□ 20.9
CSTF2TQ9H0L4 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.17■□□□□ 0.828e-9■■■■□ 20.9
CSTF2TQ9H0L4 NCOR2-215ENST00000458234 4675 ntAPPRIS ALT2 TSL 1 (best)13.29□□□□□ -0.289e-7■■■■□ 20.9
CSTF2TQ9H0L4 DNAJC6-202ENST00000371069 5365 ntAPPRIS P4 TSL 1 (best) BASIC9.63□□□□□ -0.874e-7■■■■□ 20.9
CSTF2TQ9H0L4 SDF4-207ENST00000494748 3516 ntTSL 214.61□□□□□ -0.073e-7■■■■□ 20.9
CSTF2TQ9H0L4 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.132e-7■■■■□ 20.9
CSTF2TQ9H0L4 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.8□□□□□ -0.22e-7■■■■□ 20.9
CSTF2TQ9H0L4 ZEB1-218ENST00000560196 1014 ntTSL 1 (best)12.91□□□□□ -0.347e-8■■■■□ 20.9
CSTF2TQ9H0L4 ZEB1-206ENST00000488625 6026 ntTSL 1 (best)9.19□□□□□ -0.947e-8■■■■□ 20.9
CSTF2TQ9H0L4 ZEB1-211ENST00000558440 886 ntTSL 1 (best)7.07□□□□□ -1.287e-8■■■■□ 20.9
CSTF2TQ9H0L4 ZEB1-203ENST00000424869 887 ntTSL 57.05□□□□□ -1.287e-8■■■■□ 20.9
CSTF2TQ9H0L4 ZEB1-223ENST00000561304 1383 ntTSL 1 (best)6.95□□□□□ -1.37e-8■■■■□ 20.9
CSTF2TQ9H0L4 ZEB1-217ENST00000559858 2745 ntTSL 1 (best)6.54□□□□□ -1.367e-8■■■■□ 20.9
CSTF2TQ9H0L4 ZEB1-204ENST00000437844 6246 ntTSL 1 (best)6.52□□□□□ -1.377e-8■■■■□ 20.9
CSTF2TQ9H0L4 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.57e-8■■■■□ 20.9
CSTF2TQ9H0L4 ZEB1-209ENST00000542879 3645 ntTSL 25.3□□□□□ -1.567e-8■■■■□ 20.9
CSTF2TQ9H0L4 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.597e-8■■■■□ 20.9
CSTF2TQ9H0L4 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.617e-8■■■■□ 20.9
CSTF2TQ9H0L4 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.657e-8■■■■□ 20.9
CSTF2TQ9H0L4 PNCK-216ENST00000458354 498 ntTSL 327.2■■□□□ 1.948e-7■■■■□ 20.9
CSTF2TQ9H0L4 PNCK-209ENST00000423545 448 ntTSL 417.29■□□□□ 0.368e-7■■■■□ 20.9
CSTF2TQ9H0L4 PNCK-207ENST00000419804 561 ntTSL 417.11■□□□□ 0.338e-7■■■■□ 20.9
CSTF2TQ9H0L4 PNCK-231ENST00000488994 1437 ntTSL 216.7■□□□□ 0.268e-7■■■■□ 20.9
CSTF2TQ9H0L4 PNCK-210ENST00000425526 725 ntTSL 515.08■□□□□ 08e-7■■■■□ 20.9
CSTF2TQ9H0L4 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.173e-6■■■■□ 20.9
CSTF2TQ9H0L4 VAC14-210ENST00000568548 2945 ntTSL 1 (best)15.84■□□□□ 0.132e-6■■■■□ 20.9
CSTF2TQ9H0L4 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.112e-6■■■■□ 20.9
CSTF2TQ9H0L4 VAC14-206ENST00000564685 892 ntTSL 1 (best)13.93□□□□□ -0.182e-6■■■■□ 20.9
CSTF2TQ9H0L4 VAC14-211ENST00000568886 2151 ntTSL 1 (best)13.92□□□□□ -0.182e-6■■■■□ 20.9
CSTF2TQ9H0L4 VAC14-207ENST00000566416 780 ntTSL 39.13□□□□□ -0.952e-6■■■■□ 20.9
CSTF2TQ9H0L4 BCAR1-216ENST00000564170 552 ntTSL 419.87■□□□□ 0.772e-13■■■■□ 20.9
CSTF2TQ9H0L4 FOXP1-203ENST00000327590 5685 ntTSL 27.6□□□□□ -1.197e-8■■■■□ 20.9
CSTF2TQ9H0L4 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.083e-7■■■■□ 20.9
CSTF2TQ9H0L4 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.44□□□□□ -0.263e-7■■■■□ 20.9
CSTF2TQ9H0L4 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.52e-7■■■■□ 20.9
CSTF2TQ9H0L4 STMN3-205ENST00000634126 605 ntTSL 38.61□□□□□ -1.032e-7■■■■□ 20.9
CSTF2TQ9H0L4 ABR-215ENST00000571945 760 ntTSL 423.57■■□□□ 1.363e-6■■■■□ 20.9
CSTF2TQ9H0L4 ABR-222ENST00000573667 560 ntTSL 411.25□□□□□ -0.613e-6■■■■□ 20.9
CSTF2TQ9H0L4 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.667e-7■■■■□ 20.8
CSTF2TQ9H0L4 PTMA-206ENST00000412128 863 ntTSL 323.12■■□□□ 1.292e-7■■■■□ 20.8
CSTF2TQ9H0L4 CSNK1G3-204ENST00000508708 920 ntTSL 221.89■■□□□ 1.092e-8■■■■□ 20.8
CSTF2TQ9H0L4 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.04■□□□□ 0.962e-8■■■■□ 20.8
CSTF2TQ9H0L4 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.87■□□□□ 0.931e-7■■■■□ 20.8
CSTF2TQ9H0L4 RAB35-206ENST00000544304 2449 ntTSL 219.83■□□□□ 0.771e-6■■■■□ 20.8
Retrieved 100 of 19,151 protein–RNA pairs in 249.9 ms