RNA–Protein interactions for RNA: ENST00000532170.5

RRM1-210, Transcript of ribonucleotide reductase catalytic subunit M1, humanhuman

TSL 2

Gene RRM1, Length 3,166 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRM1-210ENST00000532170 NISCHQ9Y2I1 1504 aa17.42■□□□□ 0.38
RRM1-210ENST00000532170 ABCC9O60706 1549 aa15.59■□□□□ 0.09
RRM1-210ENST00000532170 CCDC180Q9P1Z9 1646 aa15.45■□□□□ 0.06
RRM1-210ENST00000532170 RB1CC1Q8TDY2 1594 aa14.77□□□□□ -0.05
RRM1-210ENST00000532170 DCAF8L2P0C7V8 631 aa14.74□□□□□ -0.05
RRM1-210ENST00000532170 DNAJC5BQ9UF47 199 aa14.65□□□□□ -0.06
RRM1-210ENST00000532170 NACADO15069 1562 aa14.64□□□□□ -0.07
RRM1-210ENST00000532170 PABPN1Q86U42 306 aaKnown RBP eCLIP14.54□□□□□ -0.08
RRM1-210ENST00000532170 ZCCHC6Q5VYS8 1495 aaKnown RBP14.51□□□□□ -0.09
RRM1-210ENST00000532170 UNC13AQ9UPW8 1703 aa14.44□□□□□ -0.1
RRM1-210ENST00000532170 MYO15BQ96JP2 1530 aa14.37□□□□□ -0.11
RRM1-210ENST00000532170 DCAF1Q9Y4B6 1507 aa14.34□□□□□ -0.11
RRM1-210ENST00000532170 BICRAQ9NZM4 1560 aa14.31□□□□□ -0.12
RRM1-210ENST00000532170 SCRIBQ14160 1630 aa14.14□□□□□ -0.15
RRM1-210ENST00000532170 SHROOM4Q9ULL8 1493 aa14.07□□□□□ -0.16
RRM1-210ENST00000532170 CC2D2AQ9P2K1 1620 aa14.05□□□□□ -0.16
RRM1-210ENST00000532170 CECR2Q9BXF3 1484 aa14.02□□□□□ -0.16
RRM1-210ENST00000532170 EIF4G1Q04637 1599 aaKnown RBP13.99□□□□□ -0.17
RRM1-210ENST00000532170 NCAPD3P42695 1498 aa13.51□□□□□ -0.25
RRM1-210ENST00000532170 SMARCA4P51532 1647 aa13.49□□□□□ -0.25
RRM1-210ENST00000532170 DNAJC5Q9H3Z4 198 aa13.48□□□□□ -0.25
RRM1-210ENST00000532170 ERCC6Q03468 1493 aa13.48□□□□□ -0.25
RRM1-210ENST00000532170 ATAD2BQ9ULI0 1458 aa13.48□□□□□ -0.25
RRM1-210ENST00000532170 BAZ1AQ9NRL2 1556 aaPredicted RBP13.47□□□□□ -0.25
RRM1-210ENST00000532170 MROH2BQ7Z745 1585 aa13.47□□□□□ -0.25
RRM1-210ENST00000532170 SMARCA2P51531 1590 aa13.44□□□□□ -0.26
RRM1-210ENST00000532170 HMGXB3Q12766 1538 aa13.4□□□□□ -0.26
RRM1-210ENST00000532170 CUX2O14529 1486 aa13.4□□□□□ -0.27
RRM1-210ENST00000532170 BAZ1BQ9UIG0 1483 aaKnown RBP13.37□□□□□ -0.27
RRM1-210ENST00000532170 NESP48681 1621 aa13.36□□□□□ -0.27
RRM1-210ENST00000532170 RSF1Q96T23 1441 aaPredicted RBP13.34□□□□□ -0.27
RRM1-210ENST00000532170 WIZO95785 1651 aa13.32□□□□□ -0.28
RRM1-210ENST00000532170 PEG3Q9GZU2 1588 aa13.31□□□□□ -0.28
RRM1-210ENST00000532170 LAMC3Q9Y6N6 1575 aa13.23□□□□□ -0.29
RRM1-210ENST00000532170 SUPT5HO00267 1087 aaKnown RBP13.2□□□□□ -0.3
RRM1-210ENST00000532170 THOC2Q8NI27 1593 aaKnown RBP13.19□□□□□ -0.3
RRM1-210ENST00000532170 KIF21AQ7Z4S6 1674 aa13.18□□□□□ -0.3
RRM1-210ENST00000532170 PDS5BQ9NTI5 1447 aa13.18□□□□□ -0.3
RRM1-210ENST00000532170 TOP2AP11388 1531 aaKnown RBP13.13□□□□□ -0.31
RRM1-210ENST00000532170 CADPSQ9ULU8 1353 aa13.13□□□□□ -0.31
RRM1-210ENST00000532170 MRC2Q9UBG0 1479 aa13.04□□□□□ -0.32
RRM1-210ENST00000532170 CCDC88BA6NC98 1476 aa13.04□□□□□ -0.32
RRM1-210ENST00000532170 CEP164Q9UPV0 1460 aa13.01□□□□□ -0.33
RRM1-210ENST00000532170 WDR62O43379 1518 aa13□□□□□ -0.33
RRM1-210ENST00000532170 FANCD2Q9BXW9 1451 aa12.99□□□□□ -0.33
RRM1-210ENST00000532170 TRIM41Q8WV44 630 aa12.96□□□□□ -0.33
RRM1-210ENST00000532170 CFTRP13569 1480 aa12.95□□□□□ -0.34
RRM1-210ENST00000532170 URB2Q14146 1524 aaKnown RBP12.86□□□□□ -0.35
RRM1-210ENST00000532170 OSCARQ8IYS5 282 aa12.85□□□□□ -0.35
RRM1-210ENST00000532170 PRDM2Q13029 1718 aa12.82□□□□□ -0.36
RRM1-210ENST00000532170 ZNF608Q9ULD9 1512 aaPredicted RBP12.73□□□□□ -0.37
RRM1-210ENST00000532170 IFT140Q96RY7 1462 aa12.73□□□□□ -0.37
RRM1-210ENST00000532170 TOPBP1Q92547 1522 aa12.72□□□□□ -0.37
RRM1-210ENST00000532170 ABCC8Q09428 1581 aa12.69□□□□□ -0.38
RRM1-210ENST00000532170 DNMBPQ6XZF7 1577 aa12.66□□□□□ -0.38
RRM1-210ENST00000532170 EIF4G3O43432 1585 aaKnown RBP12.65□□□□□ -0.38
RRM1-210ENST00000532170 FBLN2P98095 1184 aa12.65□□□□□ -0.39
RRM1-210ENST00000532170 RIMBP3CA6NJZ7 1639 aa12.64□□□□□ -0.39
RRM1-210ENST00000532170 RIMBP3BA6NNM3 1639 aa12.64□□□□□ -0.39
RRM1-210ENST00000532170 RIMBP3Q9UFD9 1639 aa12.64□□□□□ -0.39
RRM1-210ENST00000532170 AQRO60306 1485 aaKnown RBP eCLIP12.63□□□□□ -0.399e-7■■■■■ 27.5
RRM1-210ENST00000532170 CUX1P39880 1505 aa12.61□□□□□ -0.39
RRM1-210ENST00000532170 ARHGEF11O15085 1522 aa12.6□□□□□ -0.39
RRM1-210ENST00000532170 TARBP1Q13395 1621 aaKnown RBP12.59□□□□□ -0.39
RRM1-210ENST00000532170 POLA1P09884 1462 aaPredicted RBP12.59□□□□□ -0.39
RRM1-210ENST00000532170 CYB5RLQ6IPT4 315 aa12.59□□□□□ -0.39
RRM1-210ENST00000532170 CHD1O14646 1710 aa12.58□□□□□ -0.4
RRM1-210ENST00000532170 RAD54L2Q9Y4B4 1467 aa12.57□□□□□ -0.4
RRM1-210ENST00000532170 WRNQ14191 1432 aaPredicted RBP eCLIP12.57□□□□□ -0.4
RRM1-210ENST00000532170 SOGA1O94964 1423 aa12.56□□□□□ -0.4
RRM1-210ENST00000532170 TDRD9Q8NDG6 1382 aaKnown RBP12.56□□□□□ -0.4
RRM1-210ENST00000532170 FGD5Q6ZNL6 1462 aa12.56□□□□□ -0.4
RRM1-210ENST00000532170 SYNJ1O43426 1573 aa12.53□□□□□ -0.4
RRM1-210ENST00000532170 CHMP7Q8WUX9 453 aaPredicted RBP12.5□□□□□ -0.41
RRM1-210ENST00000532170 TRHP20396 242 aaPredicted RBP12.5□□□□□ -0.41
RRM1-210ENST00000532170 TOP2BQ02880 1626 aa12.49□□□□□ -0.41
RRM1-210ENST00000532170 SNAPC4Q5SXM2 1469 aa12.48□□□□□ -0.41
RRM1-210ENST00000532170 BIVM-ERCC5R4GMW8 1640 aa12.46□□□□□ -0.41
RRM1-210ENST00000532170 ARAP1Q96P48 1450 aa12.45□□□□□ -0.42
RRM1-210ENST00000532170 GRIN2BQ13224 1484 aa12.43□□□□□ -0.42
RRM1-210ENST00000532170 WDR97A6NE52 1622 aa12.43□□□□□ -0.42
RRM1-210ENST00000532170 MAGI1Q96QZ7 1491 aaPredicted RBP12.43□□□□□ -0.42
RRM1-210ENST00000532170 ABCA10Q8WWZ4 1543 aa12.41□□□□□ -0.42
RRM1-210ENST00000532170 GAPVD1Q14C86 1478 aa12.4□□□□□ -0.42
RRM1-210ENST00000532170 SYNJ2O15056 1496 aa12.4□□□□□ -0.43
RRM1-210ENST00000532170 PBRM1Q86U86 1689 aa12.39□□□□□ -0.43
RRM1-210ENST00000532170 CLASP1Q7Z460 1538 aa12.38□□□□□ -0.43
RRM1-210ENST00000532170 ABCA5Q8WWZ7 1642 aa12.33□□□□□ -0.44
RRM1-210ENST00000532170 CHIC1Q5VXU3 224 aa12.31□□□□□ -0.44
RRM1-210ENST00000532170 KIF27Q86VH2 1401 aa12.29□□□□□ -0.44
RRM1-210ENST00000532170 RUSC2Q8N2Y8 1516 aa12.28□□□□□ -0.44
RRM1-210ENST00000532170 GRIN2AQ12879 1464 aa12.27□□□□□ -0.45
RRM1-210ENST00000532170 IGF1RP08069 1367 aa12.27□□□□□ -0.45
RRM1-210ENST00000532170 ERICH3Q5RHP9 1530 aa12.24□□□□□ -0.45
RRM1-210ENST00000532170 ADAMTS12P58397 1594 aa12.24□□□□□ -0.45
RRM1-210ENST00000532170 FAM9AQ8IZU1 332 aaPredicted RBP12.23□□□□□ -0.45
RRM1-210ENST00000532170 CEP170Q5SW79 1584 aa12.23□□□□□ -0.45
RRM1-210ENST00000532170 ERCC6L2Q5T890 1561 aa12.23□□□□□ -0.45
RRM1-210ENST00000532170 FHAD1B1AJZ9 1412 aa12.22□□□□□ -0.45
RRM1-210ENST00000532170 NUP160Q12769 1436 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms