RNA–Protein interactions for RNA: ENST00000379370.6

AGRN-201, Transcript of agrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AGRN, Length 7,323 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-201ENST00000379370 DCAF8L2P0C7V8 631 aa25.66■■□□□ 1.7
AGRN-201ENST00000379370 EHMT2Q96KQ7 1210 aa23.68■■□□□ 1.38
AGRN-201ENST00000379370 SUPT5HO00267 1087 aaKnown RBP23.58■■□□□ 1.36
AGRN-201ENST00000379370 NISCHQ9Y2I1 1504 aa23.4■■□□□ 1.34
AGRN-201ENST00000379370 SHROOM4Q9ULL8 1493 aa23.33■■□□□ 1.32
AGRN-201ENST00000379370 TTBK1Q5TCY1 1321 aaPredicted RBP22.73■■□□□ 1.23
AGRN-201ENST00000379370 APLP2Q06481 763 aa22.68■■□□□ 1.22
AGRN-201ENST00000379370 FAM9AQ8IZU1 332 aaPredicted RBP22.63■■□□□ 1.21
AGRN-201ENST00000379370 RANGAP1P46060 587 aaPredicted RBP22.63■■□□□ 1.21
AGRN-201ENST00000379370 ATP1B4Q9UN42 357 aaPredicted RBP22.48■■□□□ 1.19
AGRN-201ENST00000379370 PELP1Q8IZL8 1130 aaKnown RBP22.22■■□□□ 1.15
AGRN-201ENST00000379370 PCGF6Q9BYE7 350 aa21.94■■□□□ 1.1
AGRN-201ENST00000379370 MYT1LQ9UL68 1186 aa21.93■■□□□ 1.1
AGRN-201ENST00000379370 CHIC1Q5VXU3 224 aa21.8■■□□□ 1.08
AGRN-201ENST00000379370 UBTFP17480 764 aaKnown RBP21.72■■□□□ 1.07
AGRN-201ENST00000379370 TRIM41Q8WV44 630 aa21.7■■□□□ 1.06
AGRN-201ENST00000379370 ERICH6Q7L0X2 663 aa21.67■■□□□ 1.06
AGRN-201ENST00000379370 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.61■■□□□ 1.05
AGRN-201ENST00000379370 HNRNPUL2Q1KMD3 747 aaKnown RBP21.61■■□□□ 1.05
AGRN-201ENST00000379370 CCER1Q8TC90 406 aaPredicted RBP21.55■■□□□ 1.04
AGRN-201ENST00000379370 POLR3GLQ9BT43 218 aa21.48■■□□□ 1.03
AGRN-201ENST00000379370 PPARGC1BQ86YN6 1023 aaKnown RBP21.48■■□□□ 1.03
AGRN-201ENST00000379370 CNGB1Q14028 1251 aaPredicted RBP21.42■■□□□ 1.02
AGRN-201ENST00000379370 ITGAEP38570 1179 aa21.35■■□□□ 1.01
AGRN-201ENST00000379370 SLC4A1APQ9BWU0 796 aaKnown RBP21.33■■□□□ 1.01
AGRN-201ENST00000379370 YTHDC1Q96MU7 727 aaKnown RBP21.32■■□□□ 1
AGRN-201ENST00000379370 NEFLP07196 543 aa21.17■□□□□ 0.98
AGRN-201ENST00000379370 CENPBP07199 599 aaPredicted RBP21.15■□□□□ 0.98
AGRN-201ENST00000379370 PABPN1Q86U42 306 aaKnown RBP eCLIP20.97■□□□□ 0.95
AGRN-201ENST00000379370 ABCC9O60706 1549 aa20.97■□□□□ 0.95
AGRN-201ENST00000379370 ZEB1P37275 1124 aaPredicted RBP20.9■□□□□ 0.94
AGRN-201ENST00000379370 DAXXQ9UER7 740 aaPredicted RBP20.87■□□□□ 0.93
AGRN-201ENST00000379370 MYT1Q01538 1121 aa20.86■□□□□ 0.93
AGRN-201ENST00000379370 FBLN2P98095 1184 aa20.78■□□□□ 0.92
AGRN-201ENST00000379370 SLC24A1O60721 1099 aa20.77■□□□□ 0.92
AGRN-201ENST00000379370 PLPPR3Q6T4P5 718 aa20.72■□□□□ 0.91
AGRN-201ENST00000379370 BCANQ96GW7 911 aa20.72■□□□□ 0.91
AGRN-201ENST00000379370 BCL11AQ9H165 835 aa20.66■□□□□ 0.9
AGRN-201ENST00000379370 CLSPNQ9HAW4 1339 aa20.59■□□□□ 0.89
AGRN-201ENST00000379370 FAM50AQ14320 339 aaKnown RBP20.58■□□□□ 0.89
AGRN-201ENST00000379370 LOC105371045A0A1W2PR82 267 aa20.57■□□□□ 0.88
AGRN-201ENST00000379370 TRIM52Q96A61 297 aa20.56■□□□□ 0.88
AGRN-201ENST00000379370 ZNF326Q5BKZ1 582 aaKnown RBP20.49■□□□□ 0.87
AGRN-201ENST00000379370 ARID3CA6NKF2 412 aa20.47■□□□□ 0.87
AGRN-201ENST00000379370 TRIM26Q12899 539 aaPredicted RBP20.45■□□□□ 0.86
AGRN-201ENST00000379370 NEUROD1Q13562 356 aa20.38■□□□□ 0.85
AGRN-201ENST00000379370 ZNF316A6NFI3 1004 aaPredicted RBP20.34■□□□□ 0.85
AGRN-201ENST00000379370 ZBTB47Q9UFB7 747 aaPredicted RBP20.25■□□□□ 0.83
AGRN-201ENST00000379370 ESF1Q9H501 851 aaKnown RBP20.24■□□□□ 0.83
AGRN-201ENST00000379370 P3H3Q8IVL6 736 aa20.19■□□□□ 0.82
AGRN-201ENST00000379370 ZNF777Q9ULD5 760 aaPredicted RBP20.15■□□□□ 0.82
AGRN-201ENST00000379370 STAG3Q9UJ98 1225 aa20.11■□□□□ 0.81
AGRN-201ENST00000379370 CHGAP10645 457 aaKnown RBP20.1■□□□□ 0.81
AGRN-201ENST00000379370 A0A0G2JS52 829 aa20.1■□□□□ 0.81
AGRN-201ENST00000379370 SCAF1Q9H7N4 1312 aaKnown RBP20.09■□□□□ 0.81
AGRN-201ENST00000379370 PLEKHG5O94827 1062 aa20.07■□□□□ 0.8
AGRN-201ENST00000379370 HRCP23327 699 aa20.07■□□□□ 0.8
AGRN-201ENST00000379370 CANXP27824 592 aaKnown RBP20.07■□□□□ 0.8
AGRN-201ENST00000379370 NEFMP07197 916 aa20.06■□□□□ 0.8
AGRN-201ENST00000379370 SCRIBQ14160 1630 aa20.01■□□□□ 0.79
AGRN-201ENST00000379370 SENP3Q9H4L4 574 aaPredicted RBP20■□□□□ 0.79
AGRN-201ENST00000379370 RTL5Q5HYW3 569 aaPredicted RBP19.96■□□□□ 0.79
AGRN-201ENST00000379370 NPM1P06748 294 aaKnown RBP eCLIP19.91■□□□□ 0.78
AGRN-201ENST00000379370 ZBTB7CA1YPR0 619 aa19.82■□□□□ 0.76
AGRN-201ENST00000379370 DIEXFQ68CQ4 756 aaKnown RBP19.82■□□□□ 0.76
AGRN-201ENST00000379370 ANP32CO43423 234 aa19.8■□□□□ 0.76
AGRN-201ENST00000379370 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.76■□□□□ 0.751e-6■□□□□ 11.1
AGRN-201ENST00000379370 CDK11AQ9UQ88 783 aaPredicted RBP19.73■□□□□ 0.75
AGRN-201ENST00000379370 C14orf37Q86TY3 774 aa19.68■□□□□ 0.74
AGRN-201ENST00000379370 SALL2Q9Y467 1007 aaPredicted RBP19.64■□□□□ 0.74
AGRN-201ENST00000379370 CSRNP3Q8WYN3 585 aa19.59■□□□□ 0.73
AGRN-201ENST00000379370 NPM2Q86SE8 214 aaKnown RBP19.58■□□□□ 0.72
AGRN-201ENST00000379370 CHMP7Q8WUX9 453 aaPredicted RBP19.57■□□□□ 0.72
AGRN-201ENST00000379370 HAP1P54257 671 aaPredicted RBP19.55■□□□□ 0.72
AGRN-201ENST00000379370 ARID4BQ4LE39 1312 aaPredicted RBP19.54■□□□□ 0.72
AGRN-201ENST00000379370 ARXQ96QS3 562 aa19.52■□□□□ 0.72
AGRN-201ENST00000379370 CHIC2Q9UKJ5 165 aa19.51■□□□□ 0.71
AGRN-201ENST00000379370 HSP90AA1P07900 732 aaKnown RBP19.49■□□□□ 0.71
AGRN-201ENST00000379370 KDM2AQ9Y2K7 1162 aa19.48■□□□□ 0.71
AGRN-201ENST00000379370 KCNH8Q96L42 1107 aa19.46■□□□□ 0.71
AGRN-201ENST00000379370 PPP1R15AO75807 674 aaPredicted RBP19.42■□□□□ 0.7
AGRN-201ENST00000379370 TULP1O00294 542 aaPredicted RBP19.41■□□□□ 0.7
AGRN-201ENST00000379370 TRHP20396 242 aaPredicted RBP19.39■□□□□ 0.69
AGRN-201ENST00000379370 RB1CC1Q8TDY2 1594 aa19.37■□□□□ 0.69
AGRN-201ENST00000379370 FAM9BQ8IZU0 186 aa19.35■□□□□ 0.69
AGRN-201ENST00000379370 LMOD2Q6P5Q4 547 aa19.35■□□□□ 0.69
AGRN-201ENST00000379370 CCDC180Q9P1Z9 1646 aa19.32■□□□□ 0.68
AGRN-201ENST00000379370 TONSLQ96HA7 1378 aa19.31■□□□□ 0.68
AGRN-201ENST00000379370 ERCC6Q03468 1493 aa19.31■□□□□ 0.68
AGRN-201ENST00000379370 TSPY4P0CV99 314 aa19.29■□□□□ 0.68
AGRN-201ENST00000379370 TSPY10P0CW01 314 aa19.29■□□□□ 0.68
AGRN-201ENST00000379370 NPHP1O15259 732 aa19.28■□□□□ 0.68
AGRN-201ENST00000379370 GTF3C3Q9Y5Q9 886 aa19.27■□□□□ 0.68
AGRN-201ENST00000379370 ANP32AP39687 249 aaKnown RBP19.24■□□□□ 0.67
AGRN-201ENST00000379370 TMC1Q8TDI8 760 aa19.23■□□□□ 0.67
AGRN-201ENST00000379370 WDR43Q15061 677 aaKnown RBP eCLIP19.21■□□□□ 0.67
AGRN-201ENST00000379370 ZCCHC6Q5VYS8 1495 aaKnown RBP19.21■□□□□ 0.67
AGRN-201ENST00000379370 PPM1GO15355 546 aaPredicted RBP19.21■□□□□ 0.67
AGRN-201ENST00000379370 MTUS2Q5JR59 1369 aa19.21■□□□□ 0.67
AGRN-201ENST00000379370 CDK11BP21127 795 aaKnown RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms