RNA–Protein interactions for RNA: ENST00000261776.9

VAC14-201, Transcript of Vac14, PIKFYVE complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAC14, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-201ENST00000261776 NISCHQ9Y2I1 1504 aa33.74■■■□□ 2.99
VAC14-201ENST00000261776 SHROOM4Q9ULL8 1493 aa30.27■■■□□ 2.44
VAC14-201ENST00000261776 SUPT5HO00267 1087 aaKnown RBP29.81■■■□□ 2.36
VAC14-201ENST00000261776 DCAF8L2P0C7V8 631 aa29.62■■■□□ 2.33
VAC14-201ENST00000261776 CHIC1Q5VXU3 224 aa28.45■■■□□ 2.14
VAC14-201ENST00000261776 ZCCHC6Q5VYS8 1495 aaKnown RBP28.43■■■□□ 2.14
VAC14-201ENST00000261776 MYO15BQ96JP2 1530 aa28.32■■■□□ 2.12
VAC14-201ENST00000261776 PCGF6Q9BYE7 350 aa28.3■■■□□ 2.12
VAC14-201ENST00000261776 LOC105371045A0A1W2PR82 267 aa28.15■■■□□ 2.1
VAC14-201ENST00000261776 EHMT2Q96KQ7 1210 aa28.05■■■□□ 2.08
VAC14-201ENST00000261776 CCDC180Q9P1Z9 1646 aa27.99■■■□□ 2.07
VAC14-201ENST00000261776 PPARGC1BQ86YN6 1023 aaKnown RBP27.95■■■□□ 2.07
VAC14-201ENST00000261776 HRCP23327 699 aa27.86■■■□□ 2.05
VAC14-201ENST00000261776 FAM9AQ8IZU1 332 aaPredicted RBP27.77■■■□□ 2.04
VAC14-201ENST00000261776 TRIM41Q8WV44 630 aa27.37■■□□□ 1.97
VAC14-201ENST00000261776 SCRIBQ14160 1630 aa27.27■■□□□ 1.96
VAC14-201ENST00000261776 TRIM26Q12899 539 aaPredicted RBP27.14■■□□□ 1.93
VAC14-201ENST00000261776 ABCC9O60706 1549 aa27.08■■□□□ 1.93
VAC14-201ENST00000261776 TTBK1Q5TCY1 1321 aaPredicted RBP27.07■■□□□ 1.92
VAC14-201ENST00000261776 DCAF1Q9Y4B6 1507 aa27.05■■□□□ 1.92
VAC14-201ENST00000261776 RSF1Q96T23 1441 aaPredicted RBP27.02■■□□□ 1.92
VAC14-201ENST00000261776 RB1CC1Q8TDY2 1594 aa26.82■■□□□ 1.88
VAC14-201ENST00000261776 CECR2Q9BXF3 1484 aa26.78■■□□□ 1.88
VAC14-201ENST00000261776 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.59■■□□□ 1.85
VAC14-201ENST00000261776 MROH2BQ7Z745 1585 aa26.51■■□□□ 1.83
VAC14-201ENST00000261776 CCER1Q8TC90 406 aaPredicted RBP26.41■■□□□ 1.82
VAC14-201ENST00000261776 WIZO95785 1651 aa26.39■■□□□ 1.81
VAC14-201ENST00000261776 PABPN1Q86U42 306 aaKnown RBP eCLIP26.37■■□□□ 1.81
VAC14-201ENST00000261776 ZEB1P37275 1124 aaPredicted RBP26.37■■□□□ 1.81
VAC14-201ENST00000261776 RANGAP1P46060 587 aaPredicted RBP26.35■■□□□ 1.81
VAC14-201ENST00000261776 SCAF1Q9H7N4 1312 aaKnown RBP26.3■■□□□ 1.8
VAC14-201ENST00000261776 PELP1Q8IZL8 1130 aaKnown RBP26.28■■□□□ 1.8
VAC14-201ENST00000261776 UBTFP17480 764 aaKnown RBP26.25■■□□□ 1.79
VAC14-201ENST00000261776 ABCC8Q09428 1581 aa26.13■■□□□ 1.77
VAC14-201ENST00000261776 NACADO15069 1562 aa26.12■■□□□ 1.77
VAC14-201ENST00000261776 CCDC88BA6NC98 1476 aa26.01■■□□□ 1.75
VAC14-201ENST00000261776 SOGA1O94964 1423 aa25.98■■□□□ 1.75
VAC14-201ENST00000261776 HNRNPUL2Q1KMD3 747 aaKnown RBP25.94■■□□□ 1.74
VAC14-201ENST00000261776 RUSC2Q8N2Y8 1516 aa25.88■■□□□ 1.73
VAC14-201ENST00000261776 CSRNP3Q8WYN3 585 aa25.85■■□□□ 1.73
VAC14-201ENST00000261776 YTHDC1Q96MU7 727 aaKnown RBP25.84■■□□□ 1.73
VAC14-201ENST00000261776 BAZ1AQ9NRL2 1556 aaPredicted RBP25.83■■□□□ 1.72
VAC14-201ENST00000261776 DIEXFQ68CQ4 756 aaKnown RBP25.82■■□□□ 1.72
VAC14-201ENST00000261776 CEP162Q5TB80 1403 aa25.79■■□□□ 1.72
VAC14-201ENST00000261776 NEUROD1Q13562 356 aa25.76■■□□□ 1.71
VAC14-201ENST00000261776 ACIN1Q9UKV3 1341 aaKnown RBP25.7■■□□□ 1.7
VAC14-201ENST00000261776 GTF3C3Q9Y5Q9 886 aa25.66■■□□□ 1.7
VAC14-201ENST00000261776 SMARCA4P51532 1647 aa25.61■■□□□ 1.69
VAC14-201ENST00000261776 TOP2AP11388 1531 aaKnown RBP25.6■■□□□ 1.69
VAC14-201ENST00000261776 SMARCA2P51531 1590 aa25.59■■□□□ 1.69
VAC14-201ENST00000261776 APLP2Q06481 763 aa25.59■■□□□ 1.69
VAC14-201ENST00000261776 CENPBP07199 599 aaPredicted RBP25.5■■□□□ 1.67
VAC14-201ENST00000261776 EIF4G1Q04637 1599 aaKnown RBP25.5■■□□□ 1.67
VAC14-201ENST00000261776 TNIKQ9UKE5 1360 aa25.49■■□□□ 1.67
VAC14-201ENST00000261776 WRNQ14191 1432 aaPredicted RBP eCLIP25.46■■□□□ 1.67
VAC14-201ENST00000261776 ITGAEP38570 1179 aa25.42■■□□□ 1.66
VAC14-201ENST00000261776 ZNF316A6NFI3 1004 aaPredicted RBP25.4■■□□□ 1.66
VAC14-201ENST00000261776 UNC13AQ9UPW8 1703 aa25.39■■□□□ 1.66
VAC14-201ENST00000261776 GOLGA3Q08378 1498 aa25.34■■□□□ 1.65
VAC14-201ENST00000261776 MIER1Q8N108 512 aa25.32■■□□□ 1.64
VAC14-201ENST00000261776 CLIP1P30622 1438 aa25.31■■□□□ 1.64
VAC14-201ENST00000261776 SYNJ1O43426 1573 aa25.2■■□□□ 1.63
VAC14-201ENST00000261776 RAPGEF2Q9Y4G8 1499 aa25.2■■□□□ 1.63
VAC14-201ENST00000261776 EEA1Q15075 1411 aa25.17■■□□□ 1.62
VAC14-201ENST00000261776 BAZ1BQ9UIG0 1483 aaKnown RBP25.15■■□□□ 1.62
VAC14-201ENST00000261776 ATP1B4Q9UN42 357 aaPredicted RBP25.15■■□□□ 1.62
VAC14-201ENST00000261776 BICRAQ9NZM4 1560 aa25.15■■□□□ 1.62
VAC14-201ENST00000261776 KANK4Q5T7N3 995 aaPredicted RBP25.12■■□□□ 1.61
VAC14-201ENST00000261776 CEP164Q9UPV0 1460 aa25.12■■□□□ 1.61
VAC14-201ENST00000261776 ATAD2BQ9ULI0 1458 aa25.08■■□□□ 1.61
VAC14-201ENST00000261776 MYT1Q01538 1121 aa25.07■■□□□ 1.6
VAC14-201ENST00000261776 P3H3Q8IVL6 736 aa25.01■■□□□ 1.6
VAC14-201ENST00000261776 VPS8Q8N3P4 1428 aa25■■□□□ 1.59
VAC14-201ENST00000261776 KIF21BO75037 1637 aa24.84■■□□□ 1.57
VAC14-201ENST00000261776 FAM50AQ14320 339 aaKnown RBP24.8■■□□□ 1.56
VAC14-201ENST00000261776 HIRIP3Q9BW71 556 aaPredicted RBP24.79■■□□□ 1.56
VAC14-201ENST00000261776 KCNH8Q96L42 1107 aa24.7■■□□□ 1.54
VAC14-201ENST00000261776 DHX57Q6P158 1386 aaKnown RBP24.7■■□□□ 1.54
VAC14-201ENST00000261776 ARAP1Q96P48 1450 aa24.69■■□□□ 1.54
VAC14-201ENST00000261776 PEG3Q9GZU2 1588 aa24.66■■□□□ 1.54
VAC14-201ENST00000261776 SIN3AQ96ST3 1273 aa24.64■■□□□ 1.54
VAC14-201ENST00000261776 KIF27Q86VH2 1401 aa24.61■■□□□ 1.53
VAC14-201ENST00000261776 BCANQ96GW7 911 aa24.6■■□□□ 1.53
VAC14-201ENST00000261776 TOP2BQ02880 1626 aa24.59■■□□□ 1.53
VAC14-201ENST00000261776 CUX1P39880 1505 aa24.57■■□□□ 1.52
VAC14-201ENST00000261776 DDX10Q13206 875 aaKnown RBP24.55■■□□□ 1.52
VAC14-201ENST00000261776 CUX2O14529 1486 aa24.54■■□□□ 1.52
VAC14-201ENST00000261776 PRXQ9BXM0 1461 aa24.54■■□□□ 1.52
VAC14-201ENST00000261776 CCNB3Q8WWL7 1395 aa24.53■■□□□ 1.52
VAC14-201ENST00000261776 ARID3CA6NKF2 412 aa24.47■■□□□ 1.51
VAC14-201ENST00000261776 RAB3GAP2Q9H2M9 1393 aa24.45■■□□□ 1.51
VAC14-201ENST00000261776 ARHGAP35Q9NRY4 1499 aa24.45■■□□□ 1.5
VAC14-201ENST00000261776 IGF1RP08069 1367 aa24.4■■□□□ 1.5
VAC14-201ENST00000261776 CARMIL1Q5VZK9 1371 aa24.4■■□□□ 1.5
VAC14-201ENST00000261776 SUPT16HQ9Y5B9 1047 aaKnown RBP24.38■■□□□ 1.49
VAC14-201ENST00000261776 NCAPD3P42695 1498 aa24.34■■□□□ 1.49
VAC14-201ENST00000261776 TRIM52Q96A61 297 aa24.33■■□□□ 1.49
VAC14-201ENST00000261776 BIVM-ERCC5R4GMW8 1640 aa24.32■■□□□ 1.48
VAC14-201ENST00000261776 PHLDB1Q86UU1 1377 aa24.31■■□□□ 1.48
VAC14-201ENST00000261776 ERICH3Q5RHP9 1530 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms