RNA–Protein interactions for RNA: ENST00000589668.1

ZNF253-202, Transcript of zinc finger protein 253, humanhuman

TSL 2

Gene ZNF253, Length 297 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253-202ENST00000589668 NISCHQ9Y2I1 1504 aa20.6■□□□□ 0.89
ZNF253-202ENST00000589668 ABCC9O60706 1549 aa19.06■□□□□ 0.64
ZNF253-202ENST00000589668 CCDC180Q9P1Z9 1646 aa18.57■□□□□ 0.56
ZNF253-202ENST00000589668 DNAJC5BQ9UF47 199 aa18.27■□□□□ 0.52
ZNF253-202ENST00000589668 RB1CC1Q8TDY2 1594 aa17.91■□□□□ 0.46
ZNF253-202ENST00000589668 PABPN1Q86U42 306 aaKnown RBP eCLIP17.75■□□□□ 0.43
ZNF253-202ENST00000589668 DCAF8L2P0C7V8 631 aa17.71■□□□□ 0.43
ZNF253-202ENST00000589668 NACADO15069 1562 aa17.69■□□□□ 0.42
ZNF253-202ENST00000589668 UNC13AQ9UPW8 1703 aa17.49■□□□□ 0.39
ZNF253-202ENST00000589668 BICRAQ9NZM4 1560 aa17.42■□□□□ 0.38
ZNF253-202ENST00000589668 MYO15BQ96JP2 1530 aa17.28■□□□□ 0.36
ZNF253-202ENST00000589668 CECR2Q9BXF3 1484 aa17.18■□□□□ 0.34
ZNF253-202ENST00000589668 CC2D2AQ9P2K1 1620 aa17.16■□□□□ 0.34
ZNF253-202ENST00000589668 SHROOM4Q9ULL8 1493 aa17.06■□□□□ 0.32
ZNF253-202ENST00000589668 EIF4G1Q04637 1599 aaKnown RBP17.02■□□□□ 0.32
ZNF253-202ENST00000589668 DNAJC5Q9H3Z4 198 aa17.01■□□□□ 0.31
ZNF253-202ENST00000589668 SCRIBQ14160 1630 aa16.99■□□□□ 0.31
ZNF253-202ENST00000589668 ZCCHC6Q5VYS8 1495 aaKnown RBP16.97■□□□□ 0.31
ZNF253-202ENST00000589668 DCAF1Q9Y4B6 1507 aa16.94■□□□□ 0.3
ZNF253-202ENST00000589668 CUX2O14529 1486 aa16.52■□□□□ 0.23
ZNF253-202ENST00000589668 ERCC6Q03468 1493 aa16.47■□□□□ 0.23
ZNF253-202ENST00000589668 NCAPD3P42695 1498 aa16.36■□□□□ 0.21
ZNF253-202ENST00000589668 NESP48681 1621 aa16.27■□□□□ 0.2
ZNF253-202ENST00000589668 ATAD2BQ9ULI0 1458 aa16.27■□□□□ 0.19
ZNF253-202ENST00000589668 TRIM41Q8WV44 630 aa16.17■□□□□ 0.18
ZNF253-202ENST00000589668 SMARCA2P51531 1590 aa16.17■□□□□ 0.18
ZNF253-202ENST00000589668 HMGXB3Q12766 1538 aa16.16■□□□□ 0.18
ZNF253-202ENST00000589668 SMARCA4P51532 1647 aa16.13■□□□□ 0.17
ZNF253-202ENST00000589668 THOC2Q8NI27 1593 aaKnown RBP16.11■□□□□ 0.17
ZNF253-202ENST00000589668 BAZ1BQ9UIG0 1483 aaKnown RBP16.09■□□□□ 0.17
ZNF253-202ENST00000589668 LAMC3Q9Y6N6 1575 aa16.03■□□□□ 0.16
ZNF253-202ENST00000589668 BAZ1AQ9NRL2 1556 aaPredicted RBP16■□□□□ 0.15
ZNF253-202ENST00000589668 KIF21AQ7Z4S6 1674 aa15.99■□□□□ 0.15
ZNF253-202ENST00000589668 PDS5BQ9NTI5 1447 aa15.99■□□□□ 0.15
ZNF253-202ENST00000589668 PEG3Q9GZU2 1588 aa15.95■□□□□ 0.14
ZNF253-202ENST00000589668 MROH2BQ7Z745 1585 aa15.89■□□□□ 0.13
ZNF253-202ENST00000589668 CADPSQ9ULU8 1353 aa15.87■□□□□ 0.13
ZNF253-202ENST00000589668 MRC2Q9UBG0 1479 aa15.86■□□□□ 0.13
ZNF253-202ENST00000589668 WDR62O43379 1518 aa15.81■□□□□ 0.12
ZNF253-202ENST00000589668 OSCARQ8IYS5 282 aa15.78■□□□□ 0.12
ZNF253-202ENST00000589668 CEP164Q9UPV0 1460 aa15.72■□□□□ 0.11
ZNF253-202ENST00000589668 FANCD2Q9BXW9 1451 aa15.69■□□□□ 0.1
ZNF253-202ENST00000589668 WIZO95785 1651 aa15.68■□□□□ 0.1
ZNF253-202ENST00000589668 CFTRP13569 1480 aa15.59■□□□□ 0.09
ZNF253-202ENST00000589668 URB2Q14146 1524 aaKnown RBP15.58■□□□□ 0.08
ZNF253-202ENST00000589668 RIMBP3CA6NJZ7 1639 aa15.56■□□□□ 0.08
ZNF253-202ENST00000589668 RIMBP3BA6NNM3 1639 aa15.56■□□□□ 0.08
ZNF253-202ENST00000589668 RIMBP3Q9UFD9 1639 aa15.56■□□□□ 0.08
ZNF253-202ENST00000589668 CYB5RLQ6IPT4 315 aa15.48■□□□□ 0.07
ZNF253-202ENST00000589668 ARHGEF11O15085 1522 aa15.48■□□□□ 0.07
ZNF253-202ENST00000589668 ZNF608Q9ULD9 1512 aaPredicted RBP15.47■□□□□ 0.07
ZNF253-202ENST00000589668 TRHP20396 242 aaPredicted RBP15.44■□□□□ 0.06
ZNF253-202ENST00000589668 RSF1Q96T23 1441 aaPredicted RBP15.43■□□□□ 0.06
ZNF253-202ENST00000589668 IFT140Q96RY7 1462 aa15.42■□□□□ 0.06
ZNF253-202ENST00000589668 TOP2AP11388 1531 aaKnown RBP15.42■□□□□ 0.06
ZNF253-202ENST00000589668 TOPBP1Q92547 1522 aa15.33■□□□□ 0.05
ZNF253-202ENST00000589668 FBLN2P98095 1184 aa15.33■□□□□ 0.04
ZNF253-202ENST00000589668 PRDM2Q13029 1718 aa15.32■□□□□ 0.04
ZNF253-202ENST00000589668 ARAP1Q96P48 1450 aa15.31■□□□□ 0.04
ZNF253-202ENST00000589668 EIF4G3O43432 1585 aaKnown RBP15.31■□□□□ 0.04
ZNF253-202ENST00000589668 CCDC88BA6NC98 1476 aa15.3■□□□□ 0.04
ZNF253-202ENST00000589668 AQRO60306 1485 aaKnown RBP eCLIP15.3■□□□□ 0.04
ZNF253-202ENST00000589668 CHD1O14646 1710 aa15.27■□□□□ 0.04
ZNF253-202ENST00000589668 ABCC8Q09428 1581 aa15.25■□□□□ 0.03
ZNF253-202ENST00000589668 AEBP2Q6ZN18 517 aaPredicted RBP15.25■□□□□ 0.03
ZNF253-202ENST00000589668 DNMBPQ6XZF7 1577 aa15.23■□□□□ 0.03
ZNF253-202ENST00000589668 TARBP1Q13395 1621 aaKnown RBP15.21■□□□□ 0.03
ZNF253-202ENST00000589668 POLA1P09884 1462 aaPredicted RBP15.16■□□□□ 0.02
ZNF253-202ENST00000589668 TDRD9Q8NDG6 1382 aaKnown RBP15.16■□□□□ 0.02
ZNF253-202ENST00000589668 RAD54L2Q9Y4B4 1467 aa15.15■□□□□ 0.02
ZNF253-202ENST00000589668 SOGA1O94964 1423 aa15.12■□□□□ 0.01
ZNF253-202ENST00000589668 CHMP7Q8WUX9 453 aaPredicted RBP15.12■□□□□ 0.01
ZNF253-202ENST00000589668 SNAPC4Q5SXM2 1469 aa15.1■□□□□ 0.01
ZNF253-202ENST00000589668 CLASP1Q7Z460 1538 aa15.08■□□□□ 0.01
ZNF253-202ENST00000589668 SYNJ1O43426 1573 aa15.04■□□□□ -0
ZNF253-202ENST00000589668 FGD5Q6ZNL6 1462 aa15.01□□□□□ -0.01
ZNF253-202ENST00000589668 MAGI1Q96QZ7 1491 aaPredicted RBP15.01□□□□□ -0.01
ZNF253-202ENST00000589668 GRIN2BQ13224 1484 aa15□□□□□ -0.01
ZNF253-202ENST00000589668 GAPVD1Q14C86 1478 aa14.99□□□□□ -0.01
ZNF253-202ENST00000589668 SYNJ2O15056 1496 aa14.98□□□□□ -0.01
ZNF253-202ENST00000589668 WDR97A6NE52 1622 aa14.97□□□□□ -0.01
ZNF253-202ENST00000589668 CUX1P39880 1505 aa14.95□□□□□ -0.02
ZNF253-202ENST00000589668 PBRM1Q86U86 1689 aa14.87□□□□□ -0.03
ZNF253-202ENST00000589668 ERCC6L2Q5T890 1561 aa14.87□□□□□ -0.03
ZNF253-202ENST00000589668 GRIN2AQ12879 1464 aa14.8□□□□□ -0.04
ZNF253-202ENST00000589668 ABCA10Q8WWZ4 1543 aa14.8□□□□□ -0.04
ZNF253-202ENST00000589668 CEP170Q5SW79 1584 aa14.79□□□□□ -0.04
ZNF253-202ENST00000589668 ABCA5Q8WWZ7 1642 aa14.79□□□□□ -0.04
ZNF253-202ENST00000589668 NUP160Q12769 1436 aa14.75□□□□□ -0.05
ZNF253-202ENST00000589668 KIF13AQ9H1H9 1805 aa14.73□□□□□ -0.05
ZNF253-202ENST00000589668 ADAMTS12P58397 1594 aa14.72□□□□□ -0.05
ZNF253-202ENST00000589668 FAM69CQ0P6D2 419 aa14.71□□□□□ -0.05
ZNF253-202ENST00000589668 WRNQ14191 1432 aaPredicted RBP eCLIP14.7□□□□□ -0.06
ZNF253-202ENST00000589668 SHROOM2Q13796 1616 aa14.7□□□□□ -0.06
ZNF253-202ENST00000589668 FHAD1B1AJZ9 1412 aa14.69□□□□□ -0.06
ZNF253-202ENST00000589668 PRG4Q92954 1404 aaPredicted RBP14.69□□□□□ -0.06
ZNF253-202ENST00000589668 JPH4Q96JJ6 628 aa14.68□□□□□ -0.06
ZNF253-202ENST00000589668 NPM1P06748 294 aaKnown RBP eCLIP14.66□□□□□ -0.06
ZNF253-202ENST00000589668 KDM4FA0A1W2PPD8 638 aa14.65□□□□□ -0.06
ZNF253-202ENST00000589668 ABCC10Q5T3U5 1492 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms