RNA–Protein interactions for RNA: ENST00000533349.5

RRM1-212, Transcript of ribonucleotide reductase catalytic subunit M1, humanhuman

TSL 2

Gene RRM1, Length 2,863 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRM1-212ENST00000533349 NISCHQ9Y2I1 1504 aa15.95■□□□□ 0.14
RRM1-212ENST00000533349 CCDC180Q9P1Z9 1646 aa14.31□□□□□ -0.12
RRM1-212ENST00000533349 MYO15BQ96JP2 1530 aa13.46□□□□□ -0.25
RRM1-212ENST00000533349 DCAF1Q9Y4B6 1507 aa13.44□□□□□ -0.26
RRM1-212ENST00000533349 ZCCHC6Q5VYS8 1495 aaKnown RBP13.37□□□□□ -0.27
RRM1-212ENST00000533349 ABCC9O60706 1549 aa13.33□□□□□ -0.28
RRM1-212ENST00000533349 NACADO15069 1562 aa13.32□□□□□ -0.28
RRM1-212ENST00000533349 RB1CC1Q8TDY2 1594 aa13.22□□□□□ -0.29
RRM1-212ENST00000533349 SHROOM4Q9ULL8 1493 aa12.95□□□□□ -0.34
RRM1-212ENST00000533349 UNC13AQ9UPW8 1703 aa12.9□□□□□ -0.34
RRM1-212ENST00000533349 BICRAQ9NZM4 1560 aa12.76□□□□□ -0.37
RRM1-212ENST00000533349 SCRIBQ14160 1630 aa12.72□□□□□ -0.37
RRM1-212ENST00000533349 DCAF8L2P0C7V8 631 aa12.7□□□□□ -0.38
RRM1-212ENST00000533349 BAZ1AQ9NRL2 1556 aaPredicted RBP12.4□□□□□ -0.42
RRM1-212ENST00000533349 EIF4G1Q04637 1599 aaKnown RBP12.38□□□□□ -0.43
RRM1-212ENST00000533349 PEG3Q9GZU2 1588 aa12.38□□□□□ -0.43
RRM1-212ENST00000533349 SMARCA4P51532 1647 aa12.35□□□□□ -0.43
RRM1-212ENST00000533349 PABPN1Q86U42 306 aaKnown RBP eCLIP12.35□□□□□ -0.43
RRM1-212ENST00000533349 SMARCA2P51531 1590 aa12.28□□□□□ -0.44
RRM1-212ENST00000533349 HMGXB3Q12766 1538 aa12.25□□□□□ -0.45
RRM1-212ENST00000533349 CC2D2AQ9P2K1 1620 aa12.24□□□□□ -0.45
RRM1-212ENST00000533349 NCAPD3P42695 1498 aa12.22□□□□□ -0.45
RRM1-212ENST00000533349 CECR2Q9BXF3 1484 aa12.22□□□□□ -0.45
RRM1-212ENST00000533349 MROH2BQ7Z745 1585 aa12.19□□□□□ -0.46
RRM1-212ENST00000533349 ATAD2BQ9ULI0 1458 aa12.17□□□□□ -0.46
RRM1-212ENST00000533349 RSF1Q96T23 1441 aaPredicted RBP12.15□□□□□ -0.47
RRM1-212ENST00000533349 TOP2AP11388 1531 aaKnown RBP12.1□□□□□ -0.47
RRM1-212ENST00000533349 WIZO95785 1651 aa12.07□□□□□ -0.48
RRM1-212ENST00000533349 BAZ1BQ9UIG0 1483 aaKnown RBP12.06□□□□□ -0.48
RRM1-212ENST00000533349 DNAJC5BQ9UF47 199 aa11.93□□□□□ -0.5
RRM1-212ENST00000533349 PRDM2Q13029 1718 aa11.93□□□□□ -0.5
RRM1-212ENST00000533349 LAMC3Q9Y6N6 1575 aa11.9□□□□□ -0.5
RRM1-212ENST00000533349 CCDC88BA6NC98 1476 aa11.82□□□□□ -0.52
RRM1-212ENST00000533349 CFTRP13569 1480 aa11.81□□□□□ -0.52
RRM1-212ENST00000533349 CADPSQ9ULU8 1353 aa11.77□□□□□ -0.52
RRM1-212ENST00000533349 PDS5BQ9NTI5 1447 aa11.71□□□□□ -0.53
RRM1-212ENST00000533349 ABCC8Q09428 1581 aa11.66□□□□□ -0.54
RRM1-212ENST00000533349 KIF21AQ7Z4S6 1674 aa11.64□□□□□ -0.55
RRM1-212ENST00000533349 THOC2Q8NI27 1593 aaKnown RBP11.63□□□□□ -0.55
RRM1-212ENST00000533349 SUPT5HO00267 1087 aaKnown RBP11.63□□□□□ -0.55
RRM1-212ENST00000533349 FANCD2Q9BXW9 1451 aa11.62□□□□□ -0.55
RRM1-212ENST00000533349 CEP164Q9UPV0 1460 aa11.62□□□□□ -0.55
RRM1-212ENST00000533349 WDR62O43379 1518 aa11.61□□□□□ -0.55
RRM1-212ENST00000533349 NESP48681 1621 aa11.6□□□□□ -0.55
RRM1-212ENST00000533349 MRC2Q9UBG0 1479 aa11.59□□□□□ -0.55
RRM1-212ENST00000533349 WDR97A6NE52 1622 aa11.58□□□□□ -0.56
RRM1-212ENST00000533349 DNMBPQ6XZF7 1577 aa11.57□□□□□ -0.56
RRM1-212ENST00000533349 BIVM-ERCC5R4GMW8 1640 aa11.57□□□□□ -0.56
RRM1-212ENST00000533349 CUX2O14529 1486 aa11.57□□□□□ -0.56
RRM1-212ENST00000533349 ERCC6Q03468 1493 aa11.53□□□□□ -0.56
RRM1-212ENST00000533349 TOP2BQ02880 1626 aa11.52□□□□□ -0.57
RRM1-212ENST00000533349 URB2Q14146 1524 aaKnown RBP11.49□□□□□ -0.57
RRM1-212ENST00000533349 TOPBP1Q92547 1522 aa11.48□□□□□ -0.57
RRM1-212ENST00000533349 CUX1P39880 1505 aa11.46□□□□□ -0.58
RRM1-212ENST00000533349 WRNQ14191 1432 aaPredicted RBP eCLIP11.44□□□□□ -0.58
RRM1-212ENST00000533349 IFT140Q96RY7 1462 aa11.42□□□□□ -0.58
RRM1-212ENST00000533349 TARBP1Q13395 1621 aaKnown RBP11.42□□□□□ -0.58
RRM1-212ENST00000533349 SYNJ1O43426 1573 aa11.41□□□□□ -0.58
RRM1-212ENST00000533349 POLA1P09884 1462 aaPredicted RBP11.37□□□□□ -0.59
RRM1-212ENST00000533349 ABCA10Q8WWZ4 1543 aa11.37□□□□□ -0.59
RRM1-212ENST00000533349 FGD5Q6ZNL6 1462 aa11.36□□□□□ -0.59
RRM1-212ENST00000533349 ABCA5Q8WWZ7 1642 aa11.34□□□□□ -0.59
RRM1-212ENST00000533349 SOGA1O94964 1423 aa11.29□□□□□ -0.6
RRM1-212ENST00000533349 ERICH3Q5RHP9 1530 aa11.29□□□□□ -0.6
RRM1-212ENST00000533349 EEA1Q15075 1411 aa11.28□□□□□ -0.6
RRM1-212ENST00000533349 EIF4G3O43432 1585 aaKnown RBP11.28□□□□□ -0.6
RRM1-212ENST00000533349 PBRM1Q86U86 1689 aa11.27□□□□□ -0.61
RRM1-212ENST00000533349 CUL7Q14999 1698 aa11.26□□□□□ -0.61
RRM1-212ENST00000533349 MAGI1Q96QZ7 1491 aaPredicted RBP11.24□□□□□ -0.61
RRM1-212ENST00000533349 GRIN2BQ13224 1484 aa11.22□□□□□ -0.61
RRM1-212ENST00000533349 KIF27Q86VH2 1401 aa11.21□□□□□ -0.61
RRM1-212ENST00000533349 GAPVD1Q14C86 1478 aa11.2□□□□□ -0.62
RRM1-212ENST00000533349 RAD54L2Q9Y4B4 1467 aa11.2□□□□□ -0.62
RRM1-212ENST00000533349 ADAMTS12P58397 1594 aa11.19□□□□□ -0.62
RRM1-212ENST00000533349 ZNF608Q9ULD9 1512 aaPredicted RBP11.16□□□□□ -0.62
RRM1-212ENST00000533349 CHIC1Q5VXU3 224 aa11.16□□□□□ -0.62
RRM1-212ENST00000533349 KIF21BO75037 1637 aa11.14□□□□□ -0.63
RRM1-212ENST00000533349 FHAD1B1AJZ9 1412 aa11.14□□□□□ -0.63
RRM1-212ENST00000533349 SYNJ2O15056 1496 aa11.14□□□□□ -0.63
RRM1-212ENST00000533349 TRIM41Q8WV44 630 aa11.14□□□□□ -0.63
RRM1-212ENST00000533349 AQRO60306 1485 aaKnown RBP eCLIP11.1□□□□□ -0.639e-7■■■■■ 27.5
RRM1-212ENST00000533349 PRXQ9BXM0 1461 aa11.1□□□□□ -0.63
RRM1-212ENST00000533349 IGF1RP08069 1367 aa11.09□□□□□ -0.63
RRM1-212ENST00000533349 SNAPC4Q5SXM2 1469 aa11.09□□□□□ -0.63
RRM1-212ENST00000533349 CHD1O14646 1710 aa11.09□□□□□ -0.63
RRM1-212ENST00000533349 TDRD9Q8NDG6 1382 aaKnown RBP11.07□□□□□ -0.64
RRM1-212ENST00000533349 GRIN2AQ12879 1464 aa11.06□□□□□ -0.64
RRM1-212ENST00000533349 NUP160Q12769 1436 aa11.06□□□□□ -0.64
RRM1-212ENST00000533349 CLASP1Q7Z460 1538 aa11.05□□□□□ -0.64
RRM1-212ENST00000533349 RAPGEF2Q9Y4G8 1499 aa11.05□□□□□ -0.64
RRM1-212ENST00000533349 SHROOM2Q13796 1616 aa11.04□□□□□ -0.64
RRM1-212ENST00000533349 CTTNBP2Q8WZ74 1663 aa11.04□□□□□ -0.64
RRM1-212ENST00000533349 CARMIL1Q5VZK9 1371 aa11.02□□□□□ -0.65
RRM1-212ENST00000533349 RUSC2Q8N2Y8 1516 aa11.01□□□□□ -0.65
RRM1-212ENST00000533349 KIAA0586Q9BVV6 1533 aa10.99□□□□□ -0.65
RRM1-212ENST00000533349 CEP170Q5SW79 1584 aa10.99□□□□□ -0.65
RRM1-212ENST00000533349 CSRNP3Q8WYN3 585 aa10.99□□□□□ -0.65
RRM1-212ENST00000533349 GOLGA3Q08378 1498 aa10.97□□□□□ -0.65
RRM1-212ENST00000533349 UGGT2Q9NYU1 1516 aa10.96□□□□□ -0.66
RRM1-212ENST00000533349 IQGAP2Q13576 1575 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms