RNA–Protein interactions for RNA: ENST00000621537.4

CMIP-211, Transcript of c-Maf inducing protein, humanhuman

TSL 5 BASIC

Gene CMIP, Length 4,000 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMIP-211ENST00000621537 NISCHQ9Y2I1 1504 aa24.26■■□□□ 1.47
CMIP-211ENST00000621537 DCAF8L2P0C7V8 631 aa22.82■■□□□ 1.24
CMIP-211ENST00000621537 ABCC9O60706 1549 aa22.7■■□□□ 1.22
CMIP-211ENST00000621537 PABPN1Q86U42 306 aaKnown RBP eCLIP21.51■■□□□ 1.03
CMIP-211ENST00000621537 CCDC180Q9P1Z9 1646 aa21.43■■□□□ 1.02
CMIP-211ENST00000621537 RB1CC1Q8TDY2 1594 aa21.22■□□□□ 0.99
CMIP-211ENST00000621537 DNAJC5BQ9UF47 199 aa20.9■□□□□ 0.94
CMIP-211ENST00000621537 NACADO15069 1562 aa20.85■□□□□ 0.93
CMIP-211ENST00000621537 CECR2Q9BXF3 1484 aa20.45■□□□□ 0.86
CMIP-211ENST00000621537 SCRIBQ14160 1630 aa20.27■□□□□ 0.83
CMIP-211ENST00000621537 ERCC6Q03468 1493 aa20.22■□□□□ 0.83
CMIP-211ENST00000621537 MYO15BQ96JP2 1530 aa20.05■□□□□ 0.8
CMIP-211ENST00000621537 TRIM41Q8WV44 630 aa20.04■□□□□ 0.8
CMIP-211ENST00000621537 SHROOM4Q9ULL8 1493 aa20.02■□□□□ 0.8
CMIP-211ENST00000621537 DNAJC5Q9H3Z4 198 aa20.01■□□□□ 0.79
CMIP-211ENST00000621537 ZCCHC6Q5VYS8 1495 aaKnown RBP19.85■□□□□ 0.77
CMIP-211ENST00000621537 CC2D2AQ9P2K1 1620 aa19.82■□□□□ 0.76
CMIP-211ENST00000621537 EIF4G1Q04637 1599 aaKnown RBP19.76■□□□□ 0.75
CMIP-211ENST00000621537 DCAF1Q9Y4B6 1507 aa19.73■□□□□ 0.75
CMIP-211ENST00000621537 TRHP20396 242 aaPredicted RBP19.58■□□□□ 0.72
CMIP-211ENST00000621537 BICRAQ9NZM4 1560 aa19.58■□□□□ 0.72
CMIP-211ENST00000621537 AEBP2Q6ZN18 517 aaPredicted RBP19.57■□□□□ 0.72
CMIP-211ENST00000621537 FBLN2P98095 1184 aa19.54■□□□□ 0.72
CMIP-211ENST00000621537 PDS5BQ9NTI5 1447 aa19.52■□□□□ 0.71
CMIP-211ENST00000621537 BAZ1BQ9UIG0 1483 aaKnown RBP19.45■□□□□ 0.7
CMIP-211ENST00000621537 OSCARQ8IYS5 282 aa19.45■□□□□ 0.7
CMIP-211ENST00000621537 CUX2O14529 1486 aa19.43■□□□□ 0.7
CMIP-211ENST00000621537 SMARCA2P51531 1590 aa19.35■□□□□ 0.69
CMIP-211ENST00000621537 FAM9AQ8IZU1 332 aaPredicted RBP19.33■□□□□ 0.69
CMIP-211ENST00000621537 UNC13AQ9UPW8 1703 aa19.26■□□□□ 0.67
CMIP-211ENST00000621537 NCAPD3P42695 1498 aa19.24■□□□□ 0.67
CMIP-211ENST00000621537 ATAD2BQ9ULI0 1458 aa19.17■□□□□ 0.66
CMIP-211ENST00000621537 BAZ1AQ9NRL2 1556 aaPredicted RBP19.11■□□□□ 0.65
CMIP-211ENST00000621537 NPM1P06748 294 aaKnown RBP eCLIP19.1■□□□□ 0.65
CMIP-211ENST00000621537 CYB5RLQ6IPT4 315 aa19.1■□□□□ 0.65
CMIP-211ENST00000621537 CADPSQ9ULU8 1353 aa19.09■□□□□ 0.65
CMIP-211ENST00000621537 CHMP7Q8WUX9 453 aaPredicted RBP19.08■□□□□ 0.64
CMIP-211ENST00000621537 SUPT5HO00267 1087 aaKnown RBP18.99■□□□□ 0.63
CMIP-211ENST00000621537 CEP164Q9UPV0 1460 aa18.97■□□□□ 0.63
CMIP-211ENST00000621537 NESP48681 1621 aa18.95■□□□□ 0.62
CMIP-211ENST00000621537 MRC2Q9UBG0 1479 aa18.89■□□□□ 0.62
CMIP-211ENST00000621537 HMGXB3Q12766 1538 aa18.87■□□□□ 0.61
CMIP-211ENST00000621537 LAMC3Q9Y6N6 1575 aa18.81■□□□□ 0.6
CMIP-211ENST00000621537 TTBK1Q5TCY1 1321 aaPredicted RBP18.8■□□□□ 0.6
CMIP-211ENST00000621537 SMARCA4P51532 1647 aa18.8■□□□□ 0.6
CMIP-211ENST00000621537 FANCD2Q9BXW9 1451 aa18.77■□□□□ 0.6
CMIP-211ENST00000621537 ABCC8Q09428 1581 aa18.59■□□□□ 0.57
CMIP-211ENST00000621537 MROH2BQ7Z745 1585 aa18.59■□□□□ 0.57
CMIP-211ENST00000621537 IFT140Q96RY7 1462 aa18.51■□□□□ 0.55
CMIP-211ENST00000621537 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.44■□□□□ 0.54
CMIP-211ENST00000621537 HNRNPUL2Q1KMD3 747 aaKnown RBP18.44■□□□□ 0.54
CMIP-211ENST00000621537 TDRD9Q8NDG6 1382 aaKnown RBP18.43■□□□□ 0.54
CMIP-211ENST00000621537 SOGA1O94964 1423 aa18.43■□□□□ 0.54
CMIP-211ENST00000621537 RSF1Q96T23 1441 aaPredicted RBP18.38■□□□□ 0.53
CMIP-211ENST00000621537 MYT1LQ9UL68 1186 aa18.38■□□□□ 0.53
CMIP-211ENST00000621537 CFTRP13569 1480 aa18.36■□□□□ 0.53
CMIP-211ENST00000621537 FAM69CQ0P6D2 419 aa18.29■□□□□ 0.52
CMIP-211ENST00000621537 AQRO60306 1485 aaKnown RBP eCLIP18.27■□□□□ 0.529e-7■■■■■ 27.2
CMIP-211ENST00000621537 WDR62O43379 1518 aa18.26■□□□□ 0.51
CMIP-211ENST00000621537 TOP2AP11388 1531 aaKnown RBP18.24■□□□□ 0.51
CMIP-211ENST00000621537 PEG3Q9GZU2 1588 aa18.21■□□□□ 0.51
CMIP-211ENST00000621537 THOC2Q8NI27 1593 aaKnown RBP18.2■□□□□ 0.5
CMIP-211ENST00000621537 WIZO95785 1651 aa18.2■□□□□ 0.5
CMIP-211ENST00000621537 KIF21AQ7Z4S6 1674 aa18.19■□□□□ 0.5
CMIP-211ENST00000621537 ATP1B4Q9UN42 357 aaPredicted RBP18.17■□□□□ 0.5
CMIP-211ENST00000621537 CCDC88BA6NC98 1476 aa18.15■□□□□ 0.5
CMIP-211ENST00000621537 TOPBP1Q92547 1522 aa18.14■□□□□ 0.49
CMIP-211ENST00000621537 WRNQ14191 1432 aaPredicted RBP eCLIP18.13■□□□□ 0.49
CMIP-211ENST00000621537 ARID4BQ4LE39 1312 aaPredicted RBP18.13■□□□□ 0.49
CMIP-211ENST00000621537 GRIN2BQ13224 1484 aa18.13■□□□□ 0.49
CMIP-211ENST00000621537 ESF1Q9H501 851 aaKnown RBP18.12■□□□□ 0.49
CMIP-211ENST00000621537 PLPPR3Q6T4P5 718 aa18.12■□□□□ 0.49
CMIP-211ENST00000621537 JPH4Q96JJ6 628 aa18.12■□□□□ 0.49
CMIP-211ENST00000621537 ARHGEF11O15085 1522 aa18.11■□□□□ 0.49
CMIP-211ENST00000621537 URB2Q14146 1524 aaKnown RBP18.11■□□□□ 0.49
CMIP-211ENST00000621537 RANGAP1P46060 587 aaPredicted RBP18.09■□□□□ 0.49
CMIP-211ENST00000621537 ZNF608Q9ULD9 1512 aaPredicted RBP18.08■□□□□ 0.48
CMIP-211ENST00000621537 SYNJ1O43426 1573 aa18.06■□□□□ 0.48
CMIP-211ENST00000621537 SNAPC4Q5SXM2 1469 aa18.03■□□□□ 0.48
CMIP-211ENST00000621537 GAPVD1Q14C86 1478 aa18.02■□□□□ 0.47
CMIP-211ENST00000621537 CARMIL2Q6F5E8 1435 aa18.01■□□□□ 0.47
CMIP-211ENST00000621537 KCNH8Q96L42 1107 aa18.01■□□□□ 0.47
CMIP-211ENST00000621537 RAD54L2Q9Y4B4 1467 aa18■□□□□ 0.47
CMIP-211ENST00000621537 DNMBPQ6XZF7 1577 aa17.99■□□□□ 0.47
CMIP-211ENST00000621537 MAGI1Q96QZ7 1491 aaPredicted RBP17.97■□□□□ 0.47
CMIP-211ENST00000621537 FGD5Q6ZNL6 1462 aa17.95■□□□□ 0.46
CMIP-211ENST00000621537 POLA1P09884 1462 aaPredicted RBP17.93■□□□□ 0.46
CMIP-211ENST00000621537 SYNJ2O15056 1496 aa17.93■□□□□ 0.46
CMIP-211ENST00000621537 RIMBP3CA6NJZ7 1639 aa17.87■□□□□ 0.45
CMIP-211ENST00000621537 RIMBP3BA6NNM3 1639 aa17.87■□□□□ 0.45
CMIP-211ENST00000621537 RIMBP3Q9UFD9 1639 aa17.87■□□□□ 0.45
CMIP-211ENST00000621537 PTPRGP23470 1445 aa17.86■□□□□ 0.45
CMIP-211ENST00000621537 ARID3CA6NKF2 412 aa17.86■□□□□ 0.45
CMIP-211ENST00000621537 PRG4Q92954 1404 aaPredicted RBP17.84■□□□□ 0.45
CMIP-211ENST00000621537 FHAD1B1AJZ9 1412 aa17.82■□□□□ 0.44
CMIP-211ENST00000621537 KIF27Q86VH2 1401 aa17.82■□□□□ 0.44
CMIP-211ENST00000621537 EHMT2Q96KQ7 1210 aa17.81■□□□□ 0.44
CMIP-211ENST00000621537 ARAP1Q96P48 1450 aa17.79■□□□□ 0.44
CMIP-211ENST00000621537 UBTFP17480 764 aaKnown RBP17.78■□□□□ 0.44
CMIP-211ENST00000621537 CDK11AQ9UQ88 783 aaPredicted RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms