RNA–Protein interactions for RNA: ENST00000480824.6

C6orf89-204, Transcript of chromosome 6 open reading frame 89, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C6orf89, Length 6,861 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf89-204ENST00000480824 MYT1Q01538 1121 aa14.86□□□□□ -0.03
C6orf89-204ENST00000480824 PELP1Q8IZL8 1130 aaKnown RBP14.59□□□□□ -0.07
C6orf89-204ENST00000480824 ERICH6Q7L0X2 663 aa14.47□□□□□ -0.09
C6orf89-204ENST00000480824 CCER1Q8TC90 406 aaPredicted RBP13.83□□□□□ -0.2
C6orf89-204ENST00000480824 EHMT2Q96KQ7 1210 aa13.81□□□□□ -0.2
C6orf89-204ENST00000480824 DCAF8L2P0C7V8 631 aa13.71□□□□□ -0.21
C6orf89-204ENST00000480824 RANGAP1P46060 587 aaPredicted RBP13.63□□□□□ -0.23
C6orf89-204ENST00000480824 TTBK1Q5TCY1 1321 aaPredicted RBP13.47□□□□□ -0.25
C6orf89-204ENST00000480824 DAXXQ9UER7 740 aaPredicted RBP13.42□□□□□ -0.26
C6orf89-204ENST00000480824 YTHDC1Q96MU7 727 aaKnown RBP13.38□□□□□ -0.27
C6orf89-204ENST00000480824 NEFLP07196 543 aa13.23□□□□□ -0.29
C6orf89-204ENST00000480824 CENPBP07199 599 aaPredicted RBP13.22□□□□□ -0.29
C6orf89-204ENST00000480824 EIF5BO60841 1220 aaKnown RBP13.07□□□□□ -0.32
C6orf89-204ENST00000480824 ZNF316A6NFI3 1004 aaPredicted RBP13.05□□□□□ -0.32
C6orf89-204ENST00000480824 RTL5Q5HYW3 569 aaPredicted RBP13.02□□□□□ -0.32
C6orf89-204ENST00000480824 PCGF6Q9BYE7 350 aa13□□□□□ -0.33
C6orf89-204ENST00000480824 CNGB1Q14028 1251 aaPredicted RBP12.98□□□□□ -0.33
C6orf89-204ENST00000480824 APLP2Q06481 763 aa12.93□□□□□ -0.34
C6orf89-204ENST00000480824 SUPT5HO00267 1087 aaKnown RBP12.89□□□□□ -0.35
C6orf89-204ENST00000480824 BCL11AQ9H165 835 aa12.88□□□□□ -0.35
C6orf89-204ENST00000480824 CLSPNQ9HAW4 1339 aa12.87□□□□□ -0.35
C6orf89-204ENST00000480824 POLR3GLQ9BT43 218 aa12.84□□□□□ -0.35
C6orf89-204ENST00000480824 AMER1Q5JTC6 1135 aaPredicted RBP12.8□□□□□ -0.36
C6orf89-204ENST00000480824 ATP1B4Q9UN42 357 aaPredicted RBP12.74□□□□□ -0.37
C6orf89-204ENST00000480824 CHIC1Q5VXU3 224 aa12.69□□□□□ -0.38
C6orf89-204ENST00000480824 SLC4A1APQ9BWU0 796 aaKnown RBP12.66□□□□□ -0.38
C6orf89-204ENST00000480824 GLIPR1L2Q4G1C9 344 aa12.63□□□□□ -0.39
C6orf89-204ENST00000480824 FAM9AQ8IZU1 332 aaPredicted RBP12.57□□□□□ -0.4
C6orf89-204ENST00000480824 ARXQ96QS3 562 aa12.53□□□□□ -0.4
C6orf89-204ENST00000480824 BCANQ96GW7 911 aa12.51□□□□□ -0.41
C6orf89-204ENST00000480824 SLC24A1O60721 1099 aa12.5□□□□□ -0.41
C6orf89-204ENST00000480824 NCBP3Q53F19 620 aaKnown RBP12.45□□□□□ -0.42
C6orf89-204ENST00000480824 MYT1LQ9UL68 1186 aa12.41□□□□□ -0.42
C6orf89-204ENST00000480824 TULP1O00294 542 aaPredicted RBP12.36□□□□□ -0.43
C6orf89-204ENST00000480824 NPM2Q86SE8 214 aaKnown RBP12.35□□□□□ -0.43
C6orf89-204ENST00000480824 ZBTB47Q9UFB7 747 aaPredicted RBP12.33□□□□□ -0.43
C6orf89-204ENST00000480824 ANP32BQ92688 251 aaKnown RBP12.31□□□□□ -0.44
C6orf89-204ENST00000480824 CDK11BP21127 795 aaKnown RBP12.29□□□□□ -0.44
C6orf89-204ENST00000480824 CDK11AQ9UQ88 783 aaPredicted RBP12.29□□□□□ -0.44
C6orf89-204ENST00000480824 PPARGC1BQ86YN6 1023 aaKnown RBP12.29□□□□□ -0.44
C6orf89-204ENST00000480824 ZEB1P37275 1124 aaPredicted RBP12.19□□□□□ -0.46
C6orf89-204ENST00000480824 NBR1Q14596 966 aa12.19□□□□□ -0.46
C6orf89-204ENST00000480824 TNNT2P45379 298 aaPredicted RBP12.16□□□□□ -0.46
C6orf89-204ENST00000480824 SHROOM4Q9ULL8 1493 aa12.16□□□□□ -0.46
C6orf89-204ENST00000480824 ITGAEP38570 1179 aa12.14□□□□□ -0.47
C6orf89-204ENST00000480824 HSP90AA1P07900 732 aaKnown RBP12.13□□□□□ -0.47
C6orf89-204ENST00000480824 CANXP27824 592 aaKnown RBP12.11□□□□□ -0.47
C6orf89-204ENST00000480824 TPRNQ4KMQ1 711 aa12.1□□□□□ -0.47
C6orf89-204ENST00000480824 RTN4Q9NQC3 1192 aaKnown RBP12.05□□□□□ -0.48
C6orf89-204ENST00000480824 ANP32AP39687 249 aaKnown RBP12.03□□□□□ -0.48
C6orf89-204ENST00000480824 ZNF326Q5BKZ1 582 aaKnown RBP12.02□□□□□ -0.48
C6orf89-204ENST00000480824 FBXO3Q9UK99 471 aa12.01□□□□□ -0.49
C6orf89-204ENST00000480824 CALRP27797 417 aaKnown RBP12□□□□□ -0.49
C6orf89-204ENST00000480824 ARID4BQ4LE39 1312 aaPredicted RBP11.99□□□□□ -0.49
C6orf89-204ENST00000480824 PRM3Q9NNZ6 103 aa11.98□□□□□ -0.49
C6orf89-204ENST00000480824 ARID3AQ99856 593 aa11.96□□□□□ -0.5
C6orf89-204ENST00000480824 GTF3C3Q9Y5Q9 886 aa11.95□□□□□ -0.5
C6orf89-204ENST00000480824 DNTTIP2Q5QJE6 756 aaKnown RBP11.94□□□□□ -0.5
C6orf89-204ENST00000480824 NAP1L5Q96NT1 182 aaPredicted RBP11.92□□□□□ -0.5
C6orf89-204ENST00000480824 TAOK2Q9UL54 1235 aa11.92□□□□□ -0.5
C6orf89-204ENST00000480824 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.91□□□□□ -0.5
C6orf89-204ENST00000480824 HNRNPUL2Q1KMD3 747 aaKnown RBP11.91□□□□□ -0.5
C6orf89-204ENST00000480824 ZBTB7CA1YPR0 619 aa11.89□□□□□ -0.51
C6orf89-204ENST00000480824 UBTFP17480 764 aaKnown RBP11.87□□□□□ -0.51
C6orf89-204ENST00000480824 TRIM44Q96DX7 344 aaPredicted RBP11.86□□□□□ -0.51
C6orf89-204ENST00000480824 APPP05067 770 aa11.86□□□□□ -0.51
C6orf89-204ENST00000480824 HRCP23327 699 aa11.84□□□□□ -0.51
C6orf89-204ENST00000480824 PDE4CQ08493 712 aa11.82□□□□□ -0.52
C6orf89-204ENST00000480824 ANO8Q9HCE9 1232 aaPredicted RBP11.82□□□□□ -0.52
C6orf89-204ENST00000480824 PTMAP06454 111 aaKnown RBP11.81□□□□□ -0.52
C6orf89-204ENST00000480824 CLSTN1O94985 981 aa11.81□□□□□ -0.52
C6orf89-204ENST00000480824 NCLP19338 710 aaKnown RBP11.79□□□□□ -0.52
C6orf89-204ENST00000480824 DIEXFQ68CQ4 756 aaKnown RBP11.79□□□□□ -0.52
C6orf89-204ENST00000480824 TNNT3P45378 269 aaPredicted RBP11.79□□□□□ -0.52
C6orf89-204ENST00000480824 A0A0G2JS52 829 aa11.76□□□□□ -0.53
C6orf89-204ENST00000480824 PLCB2Q00722 1185 aa11.76□□□□□ -0.53
C6orf89-204ENST00000480824 PATL2C9JE40 543 aaKnown RBP11.75□□□□□ -0.53
C6orf89-204ENST00000480824 TAF7LQ5H9L4 462 aa11.75□□□□□ -0.53
C6orf89-204ENST00000480824 ERICH6BQ5W0A0 696 aa11.74□□□□□ -0.53
C6orf89-204ENST00000480824 CCDC136Q96JN2 1154 aa11.72□□□□□ -0.53
C6orf89-204ENST00000480824 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.71□□□□□ -0.54
C6orf89-204ENST00000480824 UPF2Q9HAU5 1272 aaKnown RBP11.7□□□□□ -0.54
C6orf89-204ENST00000480824 MEX3CQ5U5Q3 659 aaKnown RBP11.68□□□□□ -0.54
C6orf89-204ENST00000480824 NEFMP07197 916 aa11.66□□□□□ -0.54
C6orf89-204ENST00000480824 PTMSP20962 102 aa11.65□□□□□ -0.54
C6orf89-204ENST00000480824 NEUROD1Q13562 356 aa11.64□□□□□ -0.55
C6orf89-204ENST00000480824 ZRSR1Q15695 479 aaKnown RBP11.64□□□□□ -0.55
C6orf89-204ENST00000480824 SALL2Q9Y467 1007 aaPredicted RBP11.63□□□□□ -0.55
C6orf89-204ENST00000480824 NOC3LQ8WTT2 800 aaKnown RBP11.62□□□□□ -0.55
C6orf89-204ENST00000480824 PLPPR3Q6T4P5 718 aa11.61□□□□□ -0.55
C6orf89-204ENST00000480824 PLEKHG5O94827 1062 aa11.6□□□□□ -0.55
C6orf89-204ENST00000480824 A0A0U1RQG5 324 aaPredicted RBP11.57□□□□□ -0.56
C6orf89-204ENST00000480824 FKBP8Q14318 412 aa11.56□□□□□ -0.56
C6orf89-204ENST00000480824 ANP32CO43423 234 aa11.54□□□□□ -0.56
C6orf89-204ENST00000480824 SCAF1Q9H7N4 1312 aaKnown RBP11.54□□□□□ -0.56
C6orf89-204ENST00000480824 TRIM52Q96A61 297 aa11.52□□□□□ -0.56
C6orf89-204ENST00000480824 KRI1Q8N9T8 703 aaKnown RBP11.51□□□□□ -0.57
C6orf89-204ENST00000480824 TRIM41Q8WV44 630 aa11.51□□□□□ -0.57
C6orf89-204ENST00000480824 GOLGA6L22H0YM25 854 aa11.5□□□□□ -0.57
C6orf89-204ENST00000480824 PNNQ9H307 717 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms