RNA–Protein interactions for RNA: ENST00000560196.5

ZEB1-218, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,014 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-218ENST00000560196 NISCHQ9Y2I1 1504 aa32.96■■■□□ 2.87
ZEB1-218ENST00000560196 CCDC180Q9P1Z9 1646 aa28.8■■■□□ 2.2
ZEB1-218ENST00000560196 ZCCHC6Q5VYS8 1495 aaKnown RBP27.7■■■□□ 2.02
ZEB1-218ENST00000560196 DCAF1Q9Y4B6 1507 aa27.36■■□□□ 1.97
ZEB1-218ENST00000560196 ABCC9O60706 1549 aa27.11■■□□□ 1.93
ZEB1-218ENST00000560196 MYO15BQ96JP2 1530 aa27.07■■□□□ 1.92
ZEB1-218ENST00000560196 DCAF8L2P0C7V8 631 aa27.01■■□□□ 1.91
ZEB1-218ENST00000560196 NACADO15069 1562 aa26.83■■□□□ 1.89
ZEB1-218ENST00000560196 SHROOM4Q9ULL8 1493 aa26.67■■□□□ 1.86
ZEB1-218ENST00000560196 RB1CC1Q8TDY2 1594 aa26.57■■□□□ 1.84
ZEB1-218ENST00000560196 SCRIBQ14160 1630 aa26.34■■□□□ 1.81
ZEB1-218ENST00000560196 UNC13AQ9UPW8 1703 aa25.94■■□□□ 1.74
ZEB1-218ENST00000560196 BICRAQ9NZM4 1560 aa25.75■■□□□ 1.71
ZEB1-218ENST00000560196 SUPT5HO00267 1087 aaKnown RBP25.66■■□□□ 1.7
ZEB1-218ENST00000560196 RSF1Q96T23 1441 aaPredicted RBP25.54■■□□□ 1.68
ZEB1-218ENST00000560196 CECR2Q9BXF3 1484 aa25.53■■□□□ 1.68
ZEB1-218ENST00000560196 PABPN1Q86U42 306 aaKnown RBP eCLIP25.52■■□□□ 1.68
ZEB1-218ENST00000560196 BAZ1AQ9NRL2 1556 aaPredicted RBP25.46■■□□□ 1.67
ZEB1-218ENST00000560196 MROH2BQ7Z745 1585 aa25.41■■□□□ 1.66
ZEB1-218ENST00000560196 SMARCA4P51532 1647 aa25.32■■□□□ 1.64
ZEB1-218ENST00000560196 WIZO95785 1651 aa25.17■■□□□ 1.62
ZEB1-218ENST00000560196 PEG3Q9GZU2 1588 aa25.1■■□□□ 1.61
ZEB1-218ENST00000560196 TOP2AP11388 1531 aaKnown RBP25■■□□□ 1.59
ZEB1-218ENST00000560196 EIF4G1Q04637 1599 aaKnown RBP24.96■■□□□ 1.59
ZEB1-218ENST00000560196 SMARCA2P51531 1590 aa24.94■■□□□ 1.58
ZEB1-218ENST00000560196 ATAD2BQ9ULI0 1458 aa24.93■■□□□ 1.58
ZEB1-218ENST00000560196 NCAPD3P42695 1498 aa24.77■■□□□ 1.56
ZEB1-218ENST00000560196 BAZ1BQ9UIG0 1483 aaKnown RBP24.77■■□□□ 1.56
ZEB1-218ENST00000560196 HMGXB3Q12766 1538 aa24.73■■□□□ 1.55
ZEB1-218ENST00000560196 CCDC88BA6NC98 1476 aa24.7■■□□□ 1.55
ZEB1-218ENST00000560196 CHIC1Q5VXU3 224 aa24.66■■□□□ 1.54
ZEB1-218ENST00000560196 CC2D2AQ9P2K1 1620 aa24.57■■□□□ 1.52
ZEB1-218ENST00000560196 TRIM41Q8WV44 630 aa24.2■■□□□ 1.46
ZEB1-218ENST00000560196 AEBP2Q6ZN18 517 aaPredicted RBP24.19■■□□□ 1.46
ZEB1-218ENST00000560196 CFTRP13569 1480 aa24.19■■□□□ 1.46
ZEB1-218ENST00000560196 ABCC8Q09428 1581 aa24.09■■□□□ 1.45
ZEB1-218ENST00000560196 CADPSQ9ULU8 1353 aa24.09■■□□□ 1.45
ZEB1-218ENST00000560196 WRNQ14191 1432 aaPredicted RBP eCLIP24.03■■□□□ 1.44
ZEB1-218ENST00000560196 PRDM2Q13029 1718 aa24.03■■□□□ 1.44
ZEB1-218ENST00000560196 DNAJC5BQ9UF47 199 aa23.91■■□□□ 1.42
ZEB1-218ENST00000560196 LAMC3Q9Y6N6 1575 aa23.91■■□□□ 1.42
ZEB1-218ENST00000560196 SYNJ1O43426 1573 aa23.9■■□□□ 1.42
ZEB1-218ENST00000560196 TOP2BQ02880 1626 aa23.86■■□□□ 1.41
ZEB1-218ENST00000560196 BIVM-ERCC5R4GMW8 1640 aa23.84■■□□□ 1.41
ZEB1-218ENST00000560196 FANCD2Q9BXW9 1451 aa23.8■■□□□ 1.4
ZEB1-218ENST00000560196 NESP48681 1621 aa23.78■■□□□ 1.4
ZEB1-218ENST00000560196 CUX1P39880 1505 aa23.78■■□□□ 1.4
ZEB1-218ENST00000560196 EEA1Q15075 1411 aa23.76■■□□□ 1.39
ZEB1-218ENST00000560196 PDS5BQ9NTI5 1447 aa23.71■■□□□ 1.39
ZEB1-218ENST00000560196 SOGA1O94964 1423 aa23.67■■□□□ 1.38
ZEB1-218ENST00000560196 CEP164Q9UPV0 1460 aa23.65■■□□□ 1.38
ZEB1-218ENST00000560196 FAM9AQ8IZU1 332 aaPredicted RBP23.65■■□□□ 1.38
ZEB1-218ENST00000560196 LOC105371045A0A1W2PR82 267 aa23.61■■□□□ 1.37
ZEB1-218ENST00000560196 DNMBPQ6XZF7 1577 aa23.61■■□□□ 1.37
ZEB1-218ENST00000560196 RUSC2Q8N2Y8 1516 aa23.55■■□□□ 1.36
ZEB1-218ENST00000560196 TOPBP1Q92547 1522 aa23.54■■□□□ 1.36
ZEB1-218ENST00000560196 CSRNP3Q8WYN3 585 aa23.54■■□□□ 1.36
ZEB1-218ENST00000560196 FGD5Q6ZNL6 1462 aa23.51■■□□□ 1.35
ZEB1-218ENST00000560196 KIF21AQ7Z4S6 1674 aa23.51■■□□□ 1.35
ZEB1-218ENST00000560196 URB2Q14146 1524 aaKnown RBP23.49■■□□□ 1.35
ZEB1-218ENST00000560196 KIF27Q86VH2 1401 aa23.45■■□□□ 1.34
ZEB1-218ENST00000560196 POLA1P09884 1462 aaPredicted RBP23.42■■□□□ 1.34
ZEB1-218ENST00000560196 MRC2Q9UBG0 1479 aa23.4■■□□□ 1.34
ZEB1-218ENST00000560196 KIF21BO75037 1637 aa23.4■■□□□ 1.34
ZEB1-218ENST00000560196 ABCA10Q8WWZ4 1543 aa23.36■■□□□ 1.33
ZEB1-218ENST00000560196 GOLGA3Q08378 1498 aa23.36■■□□□ 1.33
ZEB1-218ENST00000560196 CUX2O14529 1486 aa23.35■■□□□ 1.33
ZEB1-218ENST00000560196 PRXQ9BXM0 1461 aa23.3■■□□□ 1.32
ZEB1-218ENST00000560196 TNIKQ9UKE5 1360 aa23.3■■□□□ 1.32
ZEB1-218ENST00000560196 RAD54L2Q9Y4B4 1467 aa23.3■■□□□ 1.32
ZEB1-218ENST00000560196 WDR62O43379 1518 aa23.28■■□□□ 1.32
ZEB1-218ENST00000560196 ERICH3Q5RHP9 1530 aa23.27■■□□□ 1.32
ZEB1-218ENST00000560196 ERCC6Q03468 1493 aa23.26■■□□□ 1.31
ZEB1-218ENST00000560196 WDR97A6NE52 1622 aa23.26■■□□□ 1.31
ZEB1-218ENST00000560196 IGF1RP08069 1367 aa23.24■■□□□ 1.31
ZEB1-218ENST00000560196 EHMT2Q96KQ7 1210 aa23.21■■□□□ 1.31
ZEB1-218ENST00000560196 RAPGEF2Q9Y4G8 1499 aa23.2■■□□□ 1.3
ZEB1-218ENST00000560196 TARBP1Q13395 1621 aaKnown RBP23.19■■□□□ 1.3
ZEB1-218ENST00000560196 THOC2Q8NI27 1593 aaKnown RBP23.19■■□□□ 1.3
ZEB1-218ENST00000560196 UBTFP17480 764 aaKnown RBP23.16■■□□□ 1.3
ZEB1-218ENST00000560196 ABCA5Q8WWZ7 1642 aa23.15■■□□□ 1.3
ZEB1-218ENST00000560196 IFT140Q96RY7 1462 aa23.13■■□□□ 1.29
ZEB1-218ENST00000560196 CEP162Q5TB80 1403 aa23.12■■□□□ 1.29
ZEB1-218ENST00000560196 CARMIL1Q5VZK9 1371 aa23.12■■□□□ 1.29
ZEB1-218ENST00000560196 GAPVD1Q14C86 1478 aa23.09■■□□□ 1.29
ZEB1-218ENST00000560196 CUL7Q14999 1698 aa23.07■■□□□ 1.28
ZEB1-218ENST00000560196 TDRD9Q8NDG6 1382 aaKnown RBP23.06■■□□□ 1.28
ZEB1-218ENST00000560196 CLIP1P30622 1438 aa22.95■■□□□ 1.26
ZEB1-218ENST00000560196 GRIN2BQ13224 1484 aa22.94■■□□□ 1.26
ZEB1-218ENST00000560196 PBRM1Q86U86 1689 aa22.93■■□□□ 1.26
ZEB1-218ENST00000560196 AQRO60306 1485 aaKnown RBP eCLIP22.92■■□□□ 1.26
ZEB1-218ENST00000560196 ZNF608Q9ULD9 1512 aaPredicted RBP22.91■■□□□ 1.26
ZEB1-218ENST00000560196 FHAD1B1AJZ9 1412 aa22.88■■□□□ 1.25
ZEB1-218ENST00000560196 EIF4G3O43432 1585 aaKnown RBP22.85■■□□□ 1.25
ZEB1-218ENST00000560196 ADAMTS12P58397 1594 aa22.84■■□□□ 1.25
ZEB1-218ENST00000560196 VPS8Q8N3P4 1428 aa22.78■■□□□ 1.24
ZEB1-218ENST00000560196 MAGI1Q96QZ7 1491 aaPredicted RBP22.77■■□□□ 1.24
ZEB1-218ENST00000560196 CTTNBP2Q8WZ74 1663 aa22.76■■□□□ 1.23
ZEB1-218ENST00000560196 SNAPC4Q5SXM2 1469 aa22.74■■□□□ 1.23
ZEB1-218ENST00000560196 ARAP1Q96P48 1450 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms