RNA–Protein interactions for RNA: ENST00000437844.6

ZEB1-204, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 6,246 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-204ENST00000437844 NISCHQ9Y2I1 1504 aa11.4□□□□□ -0.58
ZEB1-204ENST00000437844 DCAF8L2P0C7V8 631 aa11.22□□□□□ -0.61
ZEB1-204ENST00000437844 FAM9AQ8IZU1 332 aaPredicted RBP10.68□□□□□ -0.7
ZEB1-204ENST00000437844 ABCC9O60706 1549 aa10.56□□□□□ -0.72
ZEB1-204ENST00000437844 CCDC180Q9P1Z9 1646 aa10.2□□□□□ -0.78
ZEB1-204ENST00000437844 APLP2Q06481 763 aa10.16□□□□□ -0.78
ZEB1-204ENST00000437844 RB1CC1Q8TDY2 1594 aa10.09□□□□□ -0.79
ZEB1-204ENST00000437844 PELP1Q8IZL8 1130 aaKnown RBP9.99□□□□□ -0.81
ZEB1-204ENST00000437844 PABPN1Q86U42 306 aaKnown RBP eCLIP9.97□□□□□ -0.81
ZEB1-204ENST00000437844 MYT1LQ9UL68 1186 aa9.94□□□□□ -0.82
ZEB1-204ENST00000437844 NACADO15069 1562 aa9.9□□□□□ -0.83
ZEB1-204ENST00000437844 SUPT5HO00267 1087 aaKnown RBP9.88□□□□□ -0.83
ZEB1-204ENST00000437844 EHMT2Q96KQ7 1210 aa9.82□□□□□ -0.84
ZEB1-204ENST00000437844 ATP1B4Q9UN42 357 aaPredicted RBP9.82□□□□□ -0.84
ZEB1-204ENST00000437844 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.64□□□□□ -0.87
ZEB1-204ENST00000437844 HNRNPUL2Q1KMD3 747 aaKnown RBP9.64□□□□□ -0.87
ZEB1-204ENST00000437844 RANGAP1P46060 587 aaPredicted RBP9.62□□□□□ -0.87
ZEB1-204ENST00000437844 ERCC6Q03468 1493 aa9.6□□□□□ -0.87
ZEB1-204ENST00000437844 SHROOM4Q9ULL8 1493 aa9.59□□□□□ -0.87
ZEB1-204ENST00000437844 CHIC1Q5VXU3 224 aa9.59□□□□□ -0.87
ZEB1-204ENST00000437844 CCER1Q8TC90 406 aaPredicted RBP9.59□□□□□ -0.87
ZEB1-204ENST00000437844 CECR2Q9BXF3 1484 aa9.58□□□□□ -0.88
ZEB1-204ENST00000437844 TTBK1Q5TCY1 1321 aaPredicted RBP9.55□□□□□ -0.88
ZEB1-204ENST00000437844 SCRIBQ14160 1630 aa9.53□□□□□ -0.88
ZEB1-204ENST00000437844 MYO15BQ96JP2 1530 aa9.5□□□□□ -0.89
ZEB1-204ENST00000437844 ERICH6Q7L0X2 663 aa9.49□□□□□ -0.89
ZEB1-204ENST00000437844 SLC4A1APQ9BWU0 796 aaKnown RBP9.46□□□□□ -0.89
ZEB1-204ENST00000437844 DNAJC5BQ9UF47 199 aa9.43□□□□□ -0.9
ZEB1-204ENST00000437844 ESF1Q9H501 851 aaKnown RBP9.39□□□□□ -0.91
ZEB1-204ENST00000437844 UBTFP17480 764 aaKnown RBP9.38□□□□□ -0.91
ZEB1-204ENST00000437844 BCANQ96GW7 911 aa9.37□□□□□ -0.91
ZEB1-204ENST00000437844 TRIM41Q8WV44 630 aa9.37□□□□□ -0.91
ZEB1-204ENST00000437844 DCAF1Q9Y4B6 1507 aa9.36□□□□□ -0.91
ZEB1-204ENST00000437844 ZCCHC6Q5VYS8 1495 aaKnown RBP9.35□□□□□ -0.91
ZEB1-204ENST00000437844 AEBP2Q6ZN18 517 aaPredicted RBP9.34□□□□□ -0.91
ZEB1-204ENST00000437844 POLR3GLQ9BT43 218 aa9.31□□□□□ -0.92
ZEB1-204ENST00000437844 NEFLP07196 543 aa9.3□□□□□ -0.92
ZEB1-204ENST00000437844 DAXXQ9UER7 740 aaPredicted RBP9.3□□□□□ -0.92
ZEB1-204ENST00000437844 PDS5BQ9NTI5 1447 aa9.27□□□□□ -0.92
ZEB1-204ENST00000437844 SLC24A1O60721 1099 aa9.27□□□□□ -0.93
ZEB1-204ENST00000437844 CC2D2AQ9P2K1 1620 aa9.27□□□□□ -0.93
ZEB1-204ENST00000437844 EIF4G1Q04637 1599 aaKnown RBP9.24□□□□□ -0.93
ZEB1-204ENST00000437844 TRHP20396 242 aaPredicted RBP9.23□□□□□ -0.93
ZEB1-204ENST00000437844 FBLN2P98095 1184 aa9.22□□□□□ -0.93
ZEB1-204ENST00000437844 DNAJC5Q9H3Z4 198 aa9.22□□□□□ -0.93
ZEB1-204ENST00000437844 SMARCA2P51531 1590 aa9.22□□□□□ -0.93
ZEB1-204ENST00000437844 BAZ1BQ9UIG0 1483 aaKnown RBP9.22□□□□□ -0.93
ZEB1-204ENST00000437844 CUX2O14529 1486 aa9.21□□□□□ -0.93
ZEB1-204ENST00000437844 ZBTB47Q9UFB7 747 aaPredicted RBP9.21□□□□□ -0.93
ZEB1-204ENST00000437844 NPM1P06748 294 aaKnown RBP eCLIP9.2□□□□□ -0.94
ZEB1-204ENST00000437844 NEFMP07197 916 aa9.17□□□□□ -0.94
ZEB1-204ENST00000437844 PLPPR3Q6T4P5 718 aa9.17□□□□□ -0.94
ZEB1-204ENST00000437844 PCGF6Q9BYE7 350 aa9.17□□□□□ -0.94
ZEB1-204ENST00000437844 OSCARQ8IYS5 282 aa9.16□□□□□ -0.94
ZEB1-204ENST00000437844 NPM2Q86SE8 214 aaKnown RBP9.13□□□□□ -0.95
ZEB1-204ENST00000437844 STAG3Q9UJ98 1225 aa9.11□□□□□ -0.95
ZEB1-204ENST00000437844 CLSPNQ9HAW4 1339 aa9.11□□□□□ -0.95
ZEB1-204ENST00000437844 A0A0G2JS52 829 aa9.11□□□□□ -0.95
ZEB1-204ENST00000437844 CENPBP07199 599 aaPredicted RBP9.08□□□□□ -0.96
ZEB1-204ENST00000437844 ITGAEP38570 1179 aa9.07□□□□□ -0.96
ZEB1-204ENST00000437844 CNGB1Q14028 1251 aaPredicted RBP9.06□□□□□ -0.96
ZEB1-204ENST00000437844 BAZ1AQ9NRL2 1556 aaPredicted RBP9.06□□□□□ -0.96
ZEB1-204ENST00000437844 CHMP7Q8WUX9 453 aaPredicted RBP9.05□□□□□ -0.96
ZEB1-204ENST00000437844 SCAF1Q9H7N4 1312 aaKnown RBP9.05□□□□□ -0.96
ZEB1-204ENST00000437844 BICRAQ9NZM4 1560 aa9.04□□□□□ -0.96
ZEB1-204ENST00000437844 NCAPD3P42695 1498 aa9.03□□□□□ -0.96
ZEB1-204ENST00000437844 YTHDC1Q96MU7 727 aaKnown RBP9□□□□□ -0.97
ZEB1-204ENST00000437844 CEP164Q9UPV0 1460 aa9□□□□□ -0.97
ZEB1-204ENST00000437844 HAP1P54257 671 aaPredicted RBP9□□□□□ -0.97
ZEB1-204ENST00000437844 ATAD2BQ9ULI0 1458 aa8.97□□□□□ -0.97
ZEB1-204ENST00000437844 CADPSQ9ULU8 1353 aa8.97□□□□□ -0.97
ZEB1-204ENST00000437844 MRC2Q9UBG0 1479 aa8.96□□□□□ -0.97
ZEB1-204ENST00000437844 C14orf37Q86TY3 774 aa8.96□□□□□ -0.98
ZEB1-204ENST00000437844 TRIM52Q96A61 297 aa8.94□□□□□ -0.98
ZEB1-204ENST00000437844 ZNF316A6NFI3 1004 aaPredicted RBP8.94□□□□□ -0.98
ZEB1-204ENST00000437844 CDK11BP21127 795 aaKnown RBP8.94□□□□□ -0.98
ZEB1-204ENST00000437844 CDK11AQ9UQ88 783 aaPredicted RBP8.94□□□□□ -0.98
ZEB1-204ENST00000437844 HMGXB3Q12766 1538 aa8.93□□□□□ -0.98
ZEB1-204ENST00000437844 UNC13AQ9UPW8 1703 aa8.93□□□□□ -0.98
ZEB1-204ENST00000437844 ABCC8Q09428 1581 aa8.92□□□□□ -0.98
ZEB1-204ENST00000437844 ZEB1P37275 1124 aaPredicted RBP8.92□□□□□ -0.98
ZEB1-204ENST00000437844 LAMC3Q9Y6N6 1575 aa8.91□□□□□ -0.98
ZEB1-204ENST00000437844 MYT1Q01538 1121 aa8.91□□□□□ -0.98
ZEB1-204ENST00000437844 BCL11AQ9H165 835 aa8.9□□□□□ -0.98
ZEB1-204ENST00000437844 CHGAP10645 457 aaKnown RBP8.89□□□□□ -0.99
ZEB1-204ENST00000437844 CYB5RLQ6IPT4 315 aa8.88□□□□□ -0.99
ZEB1-204ENST00000437844 DCAF8L1A6NGE4 600 aa8.87□□□□□ -0.99
ZEB1-204ENST00000437844 SMARCA4P51532 1647 aa8.86□□□□□ -0.99
ZEB1-204ENST00000437844 ZNF326Q5BKZ1 582 aaKnown RBP8.86□□□□□ -0.99
ZEB1-204ENST00000437844 CANXP27824 592 aaKnown RBP8.85□□□□□ -0.99
ZEB1-204ENST00000437844 NPHP1O15259 732 aa8.85□□□□□ -0.99
ZEB1-204ENST00000437844 FANCD2Q9BXW9 1451 aa8.84□□□□□ -0.99
ZEB1-204ENST00000437844 ARID4BQ4LE39 1312 aaPredicted RBP8.84□□□□□ -0.99
ZEB1-204ENST00000437844 FAM50AQ14320 339 aaKnown RBP8.82□□□□□ -1
ZEB1-204ENST00000437844 IFT140Q96RY7 1462 aa8.8□□□□□ -1
ZEB1-204ENST00000437844 PPP1R15AO75807 674 aaPredicted RBP8.78□□□□□ -1
ZEB1-204ENST00000437844 ZNF777Q9ULD5 760 aaPredicted RBP8.77□□□□□ -1.01
ZEB1-204ENST00000437844 ZBTB7CA1YPR0 619 aa8.77□□□□□ -1.01
ZEB1-204ENST00000437844 PLEKHG5O94827 1062 aa8.76□□□□□ -1.01
ZEB1-204ENST00000437844 ARXQ96QS3 562 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms