RNA–Protein interactions for RNA: ENST00000564685.5

VAC14-206, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 892 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-206ENST00000564685 NISCHQ9Y2I1 1504 aa36.97■■■■□ 3.51
VAC14-206ENST00000564685 ABCC9O60706 1549 aa33.72■■■□□ 2.99
VAC14-206ENST00000564685 CCDC180Q9P1Z9 1646 aa33.31■■■□□ 2.92
VAC14-206ENST00000564685 DNAJC5BQ9UF47 199 aa31.98■■■□□ 2.71
VAC14-206ENST00000564685 RB1CC1Q8TDY2 1594 aa31.91■■■□□ 2.7
VAC14-206ENST00000564685 NACADO15069 1562 aa31.6■■■□□ 2.65
VAC14-206ENST00000564685 DCAF8L2P0C7V8 631 aa31.45■■■□□ 2.63
VAC14-206ENST00000564685 PABPN1Q86U42 306 aaKnown RBP eCLIP31.36■■■□□ 2.61
VAC14-206ENST00000564685 UNC13AQ9UPW8 1703 aa31.18■■■□□ 2.58
VAC14-206ENST00000564685 MYO15BQ96JP2 1530 aa31.03■■■□□ 2.56
VAC14-206ENST00000564685 BICRAQ9NZM4 1560 aa30.98■■■□□ 2.55
VAC14-206ENST00000564685 ZCCHC6Q5VYS8 1495 aaKnown RBP30.54■■■□□ 2.48
VAC14-206ENST00000564685 SHROOM4Q9ULL8 1493 aa30.52■■■□□ 2.48
VAC14-206ENST00000564685 DCAF1Q9Y4B6 1507 aa30.49■■■□□ 2.47
VAC14-206ENST00000564685 CC2D2AQ9P2K1 1620 aa30.43■■■□□ 2.46
VAC14-206ENST00000564685 CECR2Q9BXF3 1484 aa30.42■■■□□ 2.46
VAC14-206ENST00000564685 SCRIBQ14160 1630 aa30.35■■■□□ 2.45
VAC14-206ENST00000564685 EIF4G1Q04637 1599 aaKnown RBP30.26■■■□□ 2.43
VAC14-206ENST00000564685 DNAJC5Q9H3Z4 198 aa29.65■■■□□ 2.34
VAC14-206ENST00000564685 CUX2O14529 1486 aa29.2■■■□□ 2.26
VAC14-206ENST00000564685 NCAPD3P42695 1498 aa29.19■■■□□ 2.26
VAC14-206ENST00000564685 ERCC6Q03468 1493 aa29.16■■■□□ 2.26
VAC14-206ENST00000564685 ATAD2BQ9ULI0 1458 aa29.04■■■□□ 2.24
VAC14-206ENST00000564685 SMARCA2P51531 1590 aa28.94■■■□□ 2.22
VAC14-206ENST00000564685 HMGXB3Q12766 1538 aa28.91■■■□□ 2.22
VAC14-206ENST00000564685 SMARCA4P51532 1647 aa28.91■■■□□ 2.22
VAC14-206ENST00000564685 NESP48681 1621 aa28.85■■■□□ 2.21
VAC14-206ENST00000564685 BAZ1BQ9UIG0 1483 aaKnown RBP28.75■■■□□ 2.19
VAC14-206ENST00000564685 BAZ1AQ9NRL2 1556 aaPredicted RBP28.71■■■□□ 2.19
VAC14-206ENST00000564685 PEG3Q9GZU2 1588 aa28.62■■■□□ 2.17
VAC14-206ENST00000564685 THOC2Q8NI27 1593 aaKnown RBP28.6■■■□□ 2.17
VAC14-206ENST00000564685 LAMC3Q9Y6N6 1575 aa28.58■■■□□ 2.17
VAC14-206ENST00000564685 MROH2BQ7Z745 1585 aa28.48■■■□□ 2.15
VAC14-206ENST00000564685 KIF21AQ7Z4S6 1674 aa28.45■■■□□ 2.15
VAC14-206ENST00000564685 PDS5BQ9NTI5 1447 aa28.45■■■□□ 2.15
VAC14-206ENST00000564685 CADPSQ9ULU8 1353 aa28.3■■■□□ 2.12
VAC14-206ENST00000564685 TRIM41Q8WV44 630 aa28.22■■■□□ 2.11
VAC14-206ENST00000564685 MRC2Q9UBG0 1479 aa28.21■■■□□ 2.11
VAC14-206ENST00000564685 WDR62O43379 1518 aa28.14■■■□□ 2.1
VAC14-206ENST00000564685 WIZO95785 1651 aa28.12■■■□□ 2.09
VAC14-206ENST00000564685 CEP164Q9UPV0 1460 aa28.03■■■□□ 2.08
VAC14-206ENST00000564685 FANCD2Q9BXW9 1451 aa27.97■■■□□ 2.07
VAC14-206ENST00000564685 CFTRP13569 1480 aa27.88■■■□□ 2.05
VAC14-206ENST00000564685 OSCARQ8IYS5 282 aa27.86■■■□□ 2.05
VAC14-206ENST00000564685 RSF1Q96T23 1441 aaPredicted RBP27.76■■■□□ 2.04
VAC14-206ENST00000564685 URB2Q14146 1524 aaKnown RBP27.75■■■□□ 2.03
VAC14-206ENST00000564685 TOP2AP11388 1531 aaKnown RBP27.73■■■□□ 2.03
VAC14-206ENST00000564685 PRDM2Q13029 1718 aa27.55■■■□□ 2
VAC14-206ENST00000564685 IFT140Q96RY7 1462 aa27.48■■□□□ 1.99
VAC14-206ENST00000564685 RIMBP3CA6NJZ7 1639 aa27.48■■□□□ 1.99
VAC14-206ENST00000564685 RIMBP3BA6NNM3 1639 aa27.48■■□□□ 1.99
VAC14-206ENST00000564685 RIMBP3Q9UFD9 1639 aa27.48■■□□□ 1.99
VAC14-206ENST00000564685 ZNF608Q9ULD9 1512 aaPredicted RBP27.47■■□□□ 1.99
VAC14-206ENST00000564685 CCDC88BA6NC98 1476 aa27.44■■□□□ 1.98
VAC14-206ENST00000564685 TOPBP1Q92547 1522 aa27.4■■□□□ 1.98
VAC14-206ENST00000564685 ARHGEF11O15085 1522 aa27.36■■□□□ 1.97
VAC14-206ENST00000564685 ABCC8Q09428 1581 aa27.32■■□□□ 1.96
VAC14-206ENST00000564685 EIF4G3O43432 1585 aaKnown RBP27.29■■□□□ 1.96
VAC14-206ENST00000564685 DNMBPQ6XZF7 1577 aa27.25■■□□□ 1.95
VAC14-206ENST00000564685 CYB5RLQ6IPT4 315 aa27.24■■□□□ 1.95
VAC14-206ENST00000564685 AQRO60306 1485 aaKnown RBP eCLIP27.2■■□□□ 1.95
VAC14-206ENST00000564685 TARBP1Q13395 1621 aaKnown RBP27.16■■□□□ 1.94
VAC14-206ENST00000564685 CHD1O14646 1710 aa27.16■■□□□ 1.94
VAC14-206ENST00000564685 FBLN2P98095 1184 aa27.14■■□□□ 1.94
VAC14-206ENST00000564685 POLA1P09884 1462 aaPredicted RBP27.09■■□□□ 1.93
VAC14-206ENST00000564685 TRHP20396 242 aaPredicted RBP27.07■■□□□ 1.92
VAC14-206ENST00000564685 ARAP1Q96P48 1450 aa27.06■■□□□ 1.92
VAC14-206ENST00000564685 RAD54L2Q9Y4B4 1467 aa27■■□□□ 1.91
VAC14-206ENST00000564685 SOGA1O94964 1423 aa26.99■■□□□ 1.91
VAC14-206ENST00000564685 TDRD9Q8NDG6 1382 aaKnown RBP26.98■■□□□ 1.91
VAC14-206ENST00000564685 SNAPC4Q5SXM2 1469 aa26.89■■□□□ 1.9
VAC14-206ENST00000564685 CHMP7Q8WUX9 453 aaPredicted RBP26.87■■□□□ 1.89
VAC14-206ENST00000564685 FGD5Q6ZNL6 1462 aa26.87■■□□□ 1.89
VAC14-206ENST00000564685 WDR97A6NE52 1622 aa26.85■■□□□ 1.89
VAC14-206ENST00000564685 CLASP1Q7Z460 1538 aa26.83■■□□□ 1.89
VAC14-206ENST00000564685 MAGI1Q96QZ7 1491 aaPredicted RBP26.81■■□□□ 1.88
VAC14-206ENST00000564685 SYNJ1O43426 1573 aa26.8■■□□□ 1.88
VAC14-206ENST00000564685 GRIN2BQ13224 1484 aa26.78■■□□□ 1.88
VAC14-206ENST00000564685 CUX1P39880 1505 aa26.78■■□□□ 1.88
VAC14-206ENST00000564685 SYNJ2O15056 1496 aa26.73■■□□□ 1.87
VAC14-206ENST00000564685 GAPVD1Q14C86 1478 aa26.64■■□□□ 1.86
VAC14-206ENST00000564685 PBRM1Q86U86 1689 aa26.62■■□□□ 1.85
VAC14-206ENST00000564685 AEBP2Q6ZN18 517 aaPredicted RBP26.56■■□□□ 1.84
VAC14-206ENST00000564685 ABCA10Q8WWZ4 1543 aa26.54■■□□□ 1.84
VAC14-206ENST00000564685 ABCA5Q8WWZ7 1642 aa26.51■■□□□ 1.83
VAC14-206ENST00000564685 GRIN2AQ12879 1464 aa26.42■■□□□ 1.82
VAC14-206ENST00000564685 ERCC6L2Q5T890 1561 aa26.4■■□□□ 1.82
VAC14-206ENST00000564685 WRNQ14191 1432 aaPredicted RBP eCLIP26.39■■□□□ 1.81
VAC14-206ENST00000564685 NUP160Q12769 1436 aa26.35■■□□□ 1.81
VAC14-206ENST00000564685 ADAMTS12P58397 1594 aa26.34■■□□□ 1.81
VAC14-206ENST00000564685 CEP170Q5SW79 1584 aa26.33■■□□□ 1.81
VAC14-206ENST00000564685 SUPT5HO00267 1087 aaKnown RBP26.32■■□□□ 1.8
VAC14-206ENST00000564685 FHAD1B1AJZ9 1412 aa26.28■■□□□ 1.8
VAC14-206ENST00000564685 SHROOM2Q13796 1616 aa26.25■■□□□ 1.79
VAC14-206ENST00000564685 TOP2BQ02880 1626 aa26.24■■□□□ 1.79
VAC14-206ENST00000564685 BIVM-ERCC5R4GMW8 1640 aa26.23■■□□□ 1.79
VAC14-206ENST00000564685 ERICH3Q5RHP9 1530 aa26.19■■□□□ 1.78
VAC14-206ENST00000564685 PRG4Q92954 1404 aaPredicted RBP26.15■■□□□ 1.78
VAC14-206ENST00000564685 KIF13AQ9H1H9 1805 aa26.12■■□□□ 1.77
VAC14-206ENST00000564685 JPH4Q96JJ6 628 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms